Tachysurus fulvidraco (yellow catfish): 113645707
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Entry
113645707 CDS
T08119
Symbol
abcd1
Name
(RefSeq) ATP-binding cassette sub-family D member 1
KO
K05675
ATP-binding cassette, subfamily D (ALD), member 1 [EC:
7.6.2.4
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd02010
ABC transporters
tfd04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113645707 (abcd1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
113645707 (abcd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tfd02000
]
113645707 (abcd1)
Enzymes [BR:
tfd01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
113645707 (abcd1)
Transporters [BR:
tfd02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD1 subgroup
113645707 (abcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_23
Rad17
AAA_29
Adeno_IVa2
SMC_N
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
113645707
NCBI-ProteinID:
XP_027007274
LinkDB
All DBs
Position
14:3793592..3811052
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AA seq
779 aa
AA seq
DB search
MPVVYSKLPSQLKRSSAAKKVVFLLVAAYGVKRLYPYVSERLKGRPDPQDGRLNVRHTNG
EPAEVTERRKRKRNSPALNREFLLRLKRLLSILFPRFFCKELGLLGFHSLALISRTFLSI
YVANLDGKIVKTIVKKDPQAFVWELTKWLLIAIPATFVNSAIRYLEGQLTLAFRTRLVSH
AYELYFSNQTYYRVSNMDGRLANPDQSLTEDVVMFAASVAHLYSNLTKPCLDVVMTCYTL
IKTAQSKGANTTWPSVIAGIVVALTAKILRAFSPRFGKLVAEEAKRKGDLRYMHSRIIAN
SEEIAFYGGHKVEMSQLQRSYTALRSQINLILFKRLWYVMLEQFLMKYLWSASGLVMVAV
PIITAPGYSSHDSEDLKQTVLGMKEEELVSERTEAFTTARNLLNAGADAVERIMSSYKEV
TELAGYTARVYEMFNVFEEVRVGVYRRSAEDLQGTENPGGSSEVKHGMRLEGPLHIRGQV
IDVEQGIRCENLPIITPTGDVVASSLNIKVDEGMHLLITGPNGCGKSSLFRILSGLWPVY
SGVLYKPPPKHMFYIPQRPYMSVGTLRDQVIYPDTDQEMLERGFTDQQLEGILRTVNLLY
ILEREGGWDAESDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFEAA
KDAGIALLSITHRPSLWKYHTHLLQFDGEGGWRFERLDASTRVSLQDEKLRLETQLSGIP
KMQQRLSELCSILGENSSVLSPTETEGERQGEEEKERKQQEEREEKDALPGEQGRGLME
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagtgtattcaaaacttccctcgcaactgaagaggtcttcagcagccaagaaa
gtggtgttccttctcgtcgccgcgtacggagtgaaaagactctacccgtacgtatctgaa
agacttaaaggacgtccagatcctcaggacggtagactgaacgtgcgtcacacgaacgga
gagccggcggaggtcacggagagacgaaagaggaagagaaactcacctgctctgaatcga
gaattcctcttgcgcttaaagcggctcctgagcatccttttccctcgttttttctgcaaa
gagctgggacttctgggttttcactcactggctctgatctcgcgcacatttctgtctatt
tacgtcgccaacttggatggtaaaatagtgaagaccatagtgaaaaaagacccccaggct
tttgtgtgggagttaaccaaatggctcctgatcgctatcccggcgacgtttgtaaacagc
gctatccgttatctggaaggccagctaactctggcgtttcgtaccaggctggtgagccat
gcttacgagctttacttcagcaaccagacctattatcgcgtcagcaacatggacggcagg
ctggccaacccggaccagtctctgacggaggacgtagtgatgttcgccgcctctgtggcc
cacctgtactctaacctgacgaagccctgcctggacgtagtgatgacctgctatacgctg
atcaaaaccgcacagtctaaaggtgcaaacacgacttggccttcggtgatcgccggcatc
gtggtggcgctcacggccaaaatcctgcgggcgttttccccgcgcttcggcaagctggtg
gccgaggaggccaagaggaaaggggacttgaggtacatgcattcacgcatcatcgccaac
tcggaggagatcgccttctacgggggtcacaaggtggagatgtcacagctgcagcggagc
tacacggcgctgcgctcgcagatcaacctgatcctcttcaagcggctgtggtacgtcatg
ctcgaacagttcctcatgaagtacctgtggagcgcctcgggtctcgtcatggtcgccgtg
cccatcatcaccgctccagggtactcctcacacgattcagaggacttgaagcagacggtg
ttggggatgaaggaggaagagctggtgagcgagcgcaccgaggcctttaccacagccagg
aaccttttaaacgcaggcgccgacgccgtggagcgaattatgagctcgtacaaggaggtg
acggagctggcaggctacacggcgcgtgtgtacgagatgtttaacgtgttcgaggaggtg
cgtgttggtgtgtatcgccggtcggccgaggaccttcagggcacagagaaccccggcggc
tcgagtgaggtgaaacacggtatgaggttggaggggcctttacacatcagaggtcaagtc
atcgacgtggagcagggcatcaggtgtgagaacttgcctattataactcccacaggtgac
gtcgtagcctccagcctcaacatcaaggtggacgaaggaatgcatctgttaatcacaggc
ccgaacggctgcggtaagagctcgctgtttcggatcctgagcggcctgtggcccgtgtac
agcggagtgctgtataaacctccgccgaagcacatgttctacatcccacagaggccatac
atgtccgtgggcactctgcgggatcaggtgatttatcccgacacggatcaggagatgctg
gaacgaggcttcactgatcagcagctggagggaatcctgcgcaccgtcaacctcctctat
atcctggagagggagggaggttgggatgcagagagcgactggaaggacgttctgtccgga
ggagagaagcagagaatgggaatggctcggatgttctaccacaagcccaaatacgctctc
ttggacgaatgcaccagcgccgttagtatcgacgtggagggaaaaatctttgaagctgct
aaggatgccgggatcgcgcttctgtcgatcacacaccgaccgtctctgtggaagtaccac
acccacctgctgcagtttgatggcgagggcggctggcgcttcgaaaggctggacgcatcc
acgcgtgtctcgctgcaggacgagaagctgcggttagagacccagctctcagggatcccc
aagatgcagcagcgtctgtctgaactgtgcagcattcttggtgaaaacagcagcgtgctg
agccccacggagacggagggggaacgacagggggaggaggagaaagagaggaagcagcag
gaggagagggaggagaaagacgcgctccccggcgaacagggacgaggccttatggagtga
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