Tachysurus fulvidraco (yellow catfish): 113645727
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Entry
113645727 CDS
T08119
Symbol
usp11
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 11 isoform X1
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfd01002
]
113645727 (usp11)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113645727 (usp11)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113645727 (usp11)
Peptidases and inhibitors [BR:
tfd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113645727 (usp11)
Ubiquitin system [BR:
tfd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113645727 (usp11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
Ubiquitin_3
UCH_1
USP7_C2
zf-MIZ
Zn_ribbon_3
Cys_rich_KTR
Motif
Other DBs
NCBI-GeneID:
113645727
NCBI-ProteinID:
XP_047679011
LinkDB
All DBs
Position
14:4137208..4152429
Genome browser
AA seq
1006 aa
AA seq
DB search
MVMAASSTLVVTEPPGLETQQREIESLVQNQELRLGDCWYLVSRRWFGLWSEYVKSGDQN
SLLFPGKIDNTELFDDLDSYRLKLGLVESEDFILVPSEAWRKLLSWYGMADDQPALERKV
IDLPSVLKVEIYPVEIFLCLHSDRENLVSARFSRADTILSIQKVIQKEFAVAEDAEPRLW
MKSSDNCERLRNLHMTVLDACLCTGMTVIMELRYADGTWPSSSPNITRNSMDEQDTFQGQ
PGLCGLSNLGNTCFMNSALQCLSNTPPLTEYFLRNLYLEELNFTNPLGMKGEIAEAYADV
LKQIWSGKHSFIVPRGFKAKLGHFAPQFLGYQQHDAQELLSFLLDGLHEDLNRIKKKEYV
EVKDADGRPDQEMADRAWCVHRLRNDSVIVDTFHGLLKSTLVCPECGKVSETFDPFCYLT
VPLPVSKERVMEVFFVSLDPLAKPVQYRVVVPKTGRVMDLCIALSQATNIPAEKMVVADV
FNHRFYRIYQNNESLSLIQDRDDIFFIDITEETAQTEQEREHPIGTTLYAYELDSSTVDP
DEEEEEVLLAVYMRERSNYRDYGSGGNSYSTSLFGHPLMLALPRAQCTRDALYQLFLQRL
QRYVRQPDPTEEVEEEEEEENSSEENDEEDERYKNQTNGPSGDEAEEESEEAGQDRSKTE
EPSQQSSAQSEASPSSKGEEKVEEEEEMNSEADQGSSTEEVPSASGSTDNSFQDAGDGEQ
ATAAETSVNVEDEEENDEECSQTVTQAKKGVTSSRRCAENRKKPLFTIQAVNSNGTDRGI
ADGNSALSCSNQLYVAIDWDPDMKKKYYDDIEAEKYVKDNSMAVPQQQTTVHLRSCIELF
TNVETLEKENPWFCPTCKTEQLATKKLDLWSLPEVLIIHLKRFSYTKYSREKLDIIVDFP
LRSLDFSDCLLRETGSDSEPPSIYDLIAVSNHYGGLRDGHYTSFARNKDNGQWYHFDDHA
VTSAKEKQIVTNAAYVLIYQRQDKIQHPTLAPPDDHDGLGAAMNID
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggttatggctgccagtagcaccctggtggtcacagagcctcctgggttagaaacacag
cagcgagagattgagagtttagtccagaaccaggagctccgactcggggactgttggtat
ctggtgagcagaagatggttcggtttgtggagcgagtacgtgaagagtggcgatcagaac
tccctgttgtttcccgggaagatcgataacaccgagctgtttgatgatttggactcgtac
cggctgaaactggggctggtagagagtgaggacttcatcctggtgccttccgaagcctgg
cgtaagctgctgtcctggtacggtatggcggatgaccagcctgctcttgaaaggaaggtc
atcgatcttcccagtgtactcaaagttgagatctatcctgtggaaatcttcctgtgtctg
cacagcgacagggaaaacctggtatcagcccggttcagccgagccgacaccatactcagc
attcagaaggtgatacagaaggagtttgctgtagcggaggatgctgaaccacggctgtgg
atgaaaagctctgataactgtgagaggcttcgaaaccttcacatgactgtgctggatgcc
tgtctgtgcacgggcatgacagtgatcatggagctgaggtatgcagacggcacatggccc
agctctagcccaaacatcacgaggaactccatggatgagcaggacacgtttcaagggcaa
cctggactgtgcggtctcagtaatctgggcaacacctgcttcatgaactctgctctgcag
tgtttgagcaacacacctccgctgaccgagtacttcctgaggaatttgtacctggaggag
ctgaacttcactaaccctctgggcatgaagggagagatcgctgaggcctacgccgacgtc
ctcaagcagatttggtcggggaagcactctttcattgtgccacgtggttttaaagctaag
ttgggccattttgcaccccaattcctgggttaccagcagcatgacgcccaggagcttctg
tccttcctgctggatggcctgcacgaggatctgaaccgcatcaagaaaaaagagtatgtt
gaggtcaaggacgcagatggcagaccagaccaggaaatggcagacagggcgtggtgtgtc
cacaggctacggaatgactccgtgatcgtggacacgtttcacgggctcttaaaatccaca
ctggtctgccctgagtgtggaaaggtgtctgagacctttgaccctttctgttacttgact
gttcccctgcctgtcagcaaggagagggtcatggaggtgttctttgtttccctcgaccct
ctggccaaacctgtgcagtacagagtggtcgttcccaaaactggccgagtaatggattta
tgtatcgctctgtctcaagccaccaatatcccagcggagaagatggtagtggcagatgta
tttaaccatcgcttctacaggatctatcaaaacaacgagtctctcagccttatacaggac
agagatgacatctttttcatagacatcacagaagagacagcgcagacagaacaggagagg
gaacacccaattggcacaacgttatatgcgtacgagctagacagcagcactgtagatccg
gatgaggaggaggaggaggtgctgctggccgtgtacatgcgcgaacgctccaactacaga
gactacggctcagggggaaacagctacagcacgtcactgttcggccacccgctgatgctg
gctctgcctcgtgcacagtgcaccagagatgccctttaccagctgtttctccagcgccta
cagcgatatgtgcgtcagccagacccgacagaggaagtggaggaggaagaggaagaagaa
aacagtagcgaagagaatgacgaagaagatgagagatacaaaaatcagaccaatggaccg
agcggcgatgaggctgaggaagagtctgaagaggcagggcaagacagatcgaagacagag
gagccttcccagcagagcagcgctcaatcagaagcgagtcccagcagcaaaggggaggag
aaagtggaggaggaggaggagatgaacagcgaagctgaccagggcagcagcacagaggag
gtcccatcagcatccggtagcacggacaacagcttccaagatgcaggagacggggagcag
gcgactgcagcagagacgtctgtgaatgtcgaggatgaggaagaaaatgacgaagagtgt
agtcaaacggttactcaggcgaaaaagggggtgacgagtagccgacgttgtgctgagaac
agaaagaagccactcttcaccatacaggctgtgaactccaacggcacagatcgaggcatc
gcggacggaaacagcgcactttcctgcagcaatcagctgtatgtggccattgactgggac
cctgacatgaaaaagaaatattacgacgacatagaagcagagaaatatgtaaaggacaat
agcatggctgtcccacagcagcagaccacagtgcatctgcggtcatgtatcgaactcttc
accaatgtggagacactcgagaaggaaaatccctggttctgcccgacttgtaagacggaa
cagctcgccaccaagaagctggatctgtggtctcttcctgaggtcctcatcatccacctg
aagcgcttctcttacacaaagtactcccgtgagaagctggacatcatcgtcgacttccct
ctccgaagcctggacttctccgactgcctcttgagggagacggggagcgattcggagcct
cccagcatatacgacctcatcgctgtgtctaaccactacggcgggctcagagacggacac
tataccagcttcgcccggaacaaggacaacggccagtggtatcattttgacgaccatgct
gtgacctccgcaaaagaaaaacaaatagtgaccaacgctgcctacgttttgatctaccag
cgccaagacaagatccagcacccaaccctcgcacctcctgatgatcacgatggtctgggt
gcggcaatgaatatagactga
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