Tachysurus fulvidraco (yellow catfish): 113645756
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Entry
113645756 CDS
T08119
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1 isoform X1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
113645756 (fgd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
113645756 (fgd1)
Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
113645756 (fgd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_11
FYVE_2
RHG20_PH
zf-RING_5
PH_16
Motif
Other DBs
NCBI-GeneID:
113645756
NCBI-ProteinID:
XP_027007387
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All DBs
Position
14:3559231..3624892
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AA seq
1005 aa
AA seq
DB search
MQLNRPRSALIGFSPPPPPPPPSDPSSFSSQFKTMRFSYHLSPQPGSRRTGPSTSSPRLL
TKSLSLEPGPCPGEHEAPQRLCSDPGPLGLQHCNGTSENEPQNPPPLPPKTRPPLPGPKP
QVPPKPPHLQQQSGRRPRPPDKPLPPPPSRPLPADPRQSRTGLPRAEGSSSPTCVLSLIE
RFEREQIIMVPDITGGVMCMPKVPEPQPATDAAEATDATDATDDILPCTSFSEPTERPSG
EKDQDKEAEQEQEKEQVVKEDGEVHEDIEEDDNELGASCAEKRLSTESGYGASDKLLDAM
EIRDLGQSEIPPDRLSLPPQQTEAKLANRDSGIDSISSPSHSEELCFAGDDREVCMSLPR
LSSSSSCGCVDGPAGEGAVAAAEEGTRDSEGDSDLEEGSGDESENAMAIQPQPKAERQDS
VELSVQQRVFNIANELLHTEKAYVSRLHLLDQVFCGQLMEEARTRGSFPCEVVMGVFSNI
CSIYCFHQQFLLPALEKRMEEWDVNPRIGDILQKLAPFLKMYGEYVKNFDTAMELVNTWM
ERSSQFKAIVHDIQKEEMCGNLTLQHHMLEPVQRIPRYELLLKDYLHRLPEDAEDFKDAQ
KSLELIATAAEHSNAAIRKMERMRKLLKVYELLGGEEDIVNPTNELIKEGHILKLSAKNG
TSQDRYLILFNDRLLYCVPKLRLIGQKFGVRARIDVDGMELKETSSMNVPRTFLVSGKQR
SLELQARTEEEKKDWIQAIQATIQRHEQSVETFRMLNCSVREDDCTPPNSPNCTELGKRA
PTPIREKEVTLCMKCQEPFNSITKRRHHCKACGHVVCGKCSEFRARLLYDNNRANRVCID
CYTMLVGVPPSPASLTNSSYRRRSILEKQASVAAENSVLCSFLHHMEKSSGRGWQKAWFV
VPENEPLVLYIYGAPQDVKAQRSIPLIGFEVSLPESCDRLERRYAFKMSQSHLTVYFSAE
GEELQRRWMEVLSRAGRGEELQVHGPISEALEEEAEEPSSLGEST
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaaccggcccaggagcgcgctgatcggcttcagcccgccgccgccgcctccg
ccgccatccgacccgtcctccttctccagccagttcaagacgatgcgcttttcttaccac
ctcagcccgcagcccggatcccgcagaaccggcccgtccacatccagtcctcggctccta
actaagagtctgtctctggagccaggcccgtgtccaggagaacacgaagcccctcagcgt
ctctgttcggaccctgggcccctgggactgcagcattgtaatggcacaagtgagaacgag
cctcaaaaccctccgcctttaccacctaaaacacgcccgccattacccggacccaaacca
caagtgcccccgaagccaccgcatctccagcaacagagcggccgccgaccccggcccccg
gataaacccctgcccccgcctccgtcccgcccgctccctgcagaccctcgccaatcacgg
acaggcctgccacgggccgagggaagctcctccccaacgtgcgtgctgtcactcatcgag
agatttgagagggagcaaatcatcatggtgcctgatatcactgggggagtgatgtgtatg
ccgaaggtacccgaacctcagcccgctacggatgctgcggaggctacagacgctactgac
gctacggacgatattttaccctgcacttctttcagcgagccgacggagcgtccctcgggc
gagaaggaccaggacaaagaagcagagcaagagcaggaaaaagagcaggtggtcaaagag
gacggggaggtacatgaggacatagaggaggacgataacgagctgggagcgtcctgcgcg
gaaaagcgactctcgacagagtccggctacggcgcctctgacaaactcctggacgcaatg
gagataagagacctcggccaatcggaaatcccccccgaccgcctgtcccttcctccacag
caaacggaggctaaactcgccaatcgggacagcggcatcgacagcatcagctccccgtct
cacagcgaggagctgtgcttcgccggcgacgacagagaggtgtgcatgtctcttcctcgc
ctttcctcctcttcctcgtgcggttgtgtggatggacctgcgggagaaggcgctgtcgct
gccgcggaggaaggaacgagggactcggagggagacagcgatttagaagaggggagcggg
gacgagagcgaaaacgccatggccatacagcctcagcccaaagctgagagacaggactct
gtcgagctatcagttcagcagcgtgtgtttaacatcgccaacgagctcctccacacggag
aaggcctacgtatccaggctacaccttctggaccaggtgttctgcgggcagttgatggag
gaggcgcgaacgcgaggctctttcccctgcgaggtggtgatgggcgtcttttccaacatc
tgctctatctactgcttccatcaacagttccttctgccagcgctggagaaacgcatggag
gagtgggatgtgaaccctcggatcggggacatccttcagaaactggctcccttcctgaag
atgtacggcgaatacgtgaagaactttgacacggccatggagttggtgaacacctggatg
gagcgctcgtcgcagtttaaagccatcgttcatgacattcagaaagaggagatgtgcgga
aacctcaccctacagcaccacatgttagagccagtacagcggatccctcggtacgagctc
ctactgaaggactacctgcaccggctgcctgaggacgctgaggattttaaagatgctcaa
aaatctctcgagctgatcgctacagcagccgagcattccaacgcggccattaggaaaatg
gagcgcatgaggaagttgttgaaggtgtacgagctgctcgggggagaagaggacatcgtg
aacccgactaatgagctcattaaagagggacatatcctcaaactgtcagccaaaaacgga
acatcgcaggacagatacctcatactgttcaacgacaggctgctgtactgtgtccctaaa
ctcagactgatcggacagaaatttggagtgcgggcgcggattgacgtagacggcatggag
ctgaaagagacgagcagtatgaacgtgccgaggactttcctggtgtcgggaaagcagcgc
tctctcgaactgcaggccaggactgaggaagaaaagaaagactggattcaggcgatccag
gccactatccaaaggcatgagcagagtgtggagacgttcaggatgttgaactgttcagtg
cgtgaggacgactgcactccccccaactctccgaactgcacagagcttggaaagcgcgct
cccactcccatccgggaaaaagaagtgacactgtgtatgaagtgccaggagccgttcaac
tccattaccaagagacgccaccactgcaaggcatgcggccatgtggtatgcggaaaatgt
tcagaattccgtgcccggttgttgtacgataacaatcgagcgaatcgtgtgtgtatagac
tgttacacgatgctggtgggagtcccgccctcgcctgcaagcttgaccaatagttcttat
agaagacgctcgattctggagaaacaggcctccgtggcggcggagaacagtgtcctctgc
agcttcctgcaccacatggagaaaagcagtggccgcggctggcagaaagcctggtttgtc
gtccctgaaaacgaacctctggtgctttacatttacggtgctccacaggatgtgaaagcc
cagcgaagcatccctctcatcggcttcgaagtctctcttcccgagtcatgtgaccgtctg
gagcggcgctacgccttcaaaatgagccagagtcacctgactgtttacttcagcgccgag
ggtgaggagctccaacgccgctggatggaggtgctctccagagccgggagaggggaggag
ctacaagtacacggtccaatctcagaagctctggaagaagaagcggaagaaccgagctct
ctaggagaaagcacatga
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