Tachysurus fulvidraco (yellow catfish): 113645854
Help
Entry
113645854 CDS
T08119
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113645854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113645854
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113645854
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113645854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Glyco_transf_9
Motif
Other DBs
NCBI-GeneID:
113645854
NCBI-ProteinID:
XP_027007569
LinkDB
All DBs
Position
19:4595038..4615908
Genome browser
AA seq
518 aa
AA seq
DB search
MFSATRKKFMEGLDNEYPDDNLYYSQPSIFTHRSEKDMLSSSSPSSLGQLSQLGGLHGSQ
NHLGFPMRGMNNNVQLNRNLAQSTQLPSHVTATTSVPTLSLYTPSSPSRGILPTNTRNML
NHSQTGSSISMNGWSNSMSSSGLGSPTHSSPSTICMPKQQQARQSLTINSMSGFGMGRNP
AFALNNLFSSSIFNGTDGSENVTGLDLSDFPVLADRSRREGSGNPTPLINPLAGRAPYVG
MITKPTHEQSQDFSIHNEDFPALPGHNYKDPKCSIDDSKSNLNSLCGKNVDGLKFPGDKS
LTQQNNNHQKKGIQVLPDGQVSNIPSGMVTDQFGMIGLLMFIRAAETDPGMVHLALGSDL
TTLGLNLNSPENLYPKFASPWSSTPCRPQDIDFHVPSEYLTNIQIKDKLAAVKLTRYGED
LLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPVMKANTYERGTYYFF
DCLNWRKVAKEFHLEYDKLEERPLVPSTFNYNPAQQAF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgccaccagaaagaagtttatggaggggcttgataatgaatacccagacgac
aacttgtactacagccagccatcgattttcacacatcgatctgaaaaagatatgctgtca
tcttcgtctccgtcatcgttgggtcagctgtcacagctgggcggtttacatggctcgcaa
aatcatttaggcttcccgatgagagggatgaacaacaacgtgcaactcaatcgcaatcta
gcacaaagcacacagttacctagtcacgtcacagctaccaccagtgtcccaacattgtcc
ctctatactccgagctcgccgagtagaggaattttgccgacgaacacgaggaacatgttg
aatcactcgcagacggggtcgagcatatcgatgaacggatggagcaacagcatgagcagc
tcaggcctgggaagcccgactcacagctcacccagcaccatctgcatgcccaaacagcag
caggccaggcagtcactcactatcaacagtatgtcggggtttggaatgggacggaatcct
gcgtttgctttaaacaatttattctcaagtagcatctttaatggaaccgacgggagtgaa
aacgtgaccgggctggacctgtccgattttcctgtcttagccgataggagtcgaagggaa
ggaagtggcaacccgacaccacttatcaacccgctggctgggagggctccatatgtcgga
atgatcacaaagccgacacacgagcagtcccaagacttctccatccacaatgaggacttt
cctgcacttcctggacacaactataaggatcccaaatgtagcattgatgatagcaaatcg
aacttaaactccttgtgcggtaaaaacgtcgatggtctcaagttcccaggagacaagagc
ttaacgcaacagaacaacaatcatcagaagaaaggaatccaggtgctacctgatggccaa
gtgtcgaacattccatctggcatggtgacagatcagttcgggatgattggcttgttgatg
tttattcgggcagcagagacagatccgggcatggttcacttagcgttgggcagcgacttg
accacgctcggcctcaaccttaactcaccagaaaacctttatcccaagtttgcctctcct
tggtcctccacaccttgtcggcctcaagatatcgactttcacgttccatcagaatattta
acaaacatccagataaaagacaagcttgccgcagtaaaactcacacgatacggagaagac
ctgctcttctacctttactacatgaatggtggagacctgctgcagcttttagcggcagtc
gagcttttcaatcgtgactggaggtaccacaaagaagagagggtgtggatcacacgagca
ccgggaatggaacctgtgatgaaggccaacacctatgaaagggggacgtactacttcttc
gactgtcttaactggagaaaagtagccaaggaatttcacctagagtacgacaagcttgaa
gagcggccactcgtcccatcgacgttcaactacaacccggcccagcaagccttctga
DBGET
integrated database retrieval system
