Tachysurus fulvidraco (yellow catfish): 113645890
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Entry
113645890 CDS
T08119
Symbol
ssbp1
Name
(RefSeq) single-stranded DNA-binding protein, mitochondrial
KO
K03111
single-strand DNA-binding protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03030
DNA replication
tfd03430
Mismatch repair
tfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113645890 (ssbp1)
03430 Mismatch repair
113645890 (ssbp1)
03440 Homologous recombination
113645890 (ssbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfd03032
]
113645890 (ssbp1)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113645890 (ssbp1)
03029 Mitochondrial biogenesis [BR:
tfd03029
]
113645890 (ssbp1)
DNA replication proteins [BR:
tfd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
113645890 (ssbp1)
DNA repair and recombination proteins [BR:
tfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
113645890 (ssbp1)
TLS (translesion DNA synthesis) factors
Other SOS response factors
113645890 (ssbp1)
Mitochondrial biogenesis [BR:
tfd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
113645890 (ssbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
CoV_NSP15_N
Motif
Other DBs
NCBI-GeneID:
113645890
NCBI-ProteinID:
XP_027007632
LinkDB
All DBs
Position
19:4474362..4480682
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AA seq
146 aa
AA seq
DB search
MLQRASVLLTRQIARHRSTDTSLILERSINRVQLLGRVGQDPVMRQVEGRNPVTIFSMAT
NEMWRSGEGEVSQTGDVSQKTTWHRISVFKPGLRDVAYNYVKKGSRILVEGKLDYGEYVD
KNNVRRQATTIIADNIVFLSEIRDRE
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagcgtgcatcggtgctgttaaccaggcagattgccaggcacagatccacagat
accagcctcatcttggagagatccattaaccgggtccagttgctggggcgtgtgggtcag
gaccctgttatgagacaagttgaaggtaggaaccccgtcaccatcttctccatggcgacc
aatgagatgtggcgctctggagagggagaggtctcgcagacaggagacgtcagccagaag
acgacgtggcacagaatctcagtgttcaagcctggtctaagagatgtagcctataactac
gtaaaaaaagggtctcggattctagtcgaggggaagctggactacggagagtacgtggat
aagaataacgtgagaaggcaggccaccaccatcattgcagataacattgtgtttttgagc
gaaatccgagatcgagagtga
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