Tachysurus fulvidraco (yellow catfish): 113646116
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Entry
113646116 CDS
T08119
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113646116 (lingo3a)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
113646116 (lingo3a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
I-set
Ig_3
LRR_4
LRR_LRWD1
ig
Ig_2
LRRNT
V-set
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
113646116
NCBI-ProteinID:
XP_047666558
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All DBs
Position
2:23353879..23358233
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AA seq
655 aa
AA seq
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MAGFPVLGLLGLLLLQITPPVCHGQGCPQVCDCVPQRKSVNCQNKHLNSFPNGIPSDTRL
LDLGRNQLRWVEHGDLKVYTRLEDLNLSENLISVLEPNAFSSLLNLRILRLRANQLKLVP
MGAFSHLANLTVLDLSGNKLVILVDFTFQDLRRLQKLEVGDNDLVYISNKAFLGLTGLRE
LTIERCNLTSISGQALSYLRGLVSLRLRYLNIVSLEEHNFHKLGGLRGLEIDHWPFLEYI
SPYSFQGLSLSWLFITNTNITTVPSGALRNLIHLSSLNLSHNPISVLESWALRDLVNLKE
LHLVGTNLMCVQPYGLGGLQQIRLLNLSNNRLVTLEEGTFHSVNTLEILRLDGNPLSCDC
RLLWILQRRKTLNFDGKFPVCARPVEVLGKALSAFSDTALLDHFTCQRPKIRNRKLQQLS
AREGQIVSFYCQADGDPTPTIFWISPQRRRITTRSTGRLIVLPEGTLEIHYVQITDSGTY
ICIASNAGGNDTYFATLTVTGIPLDAGLLPNRSYVGDLNDSNLNDTRVFLKFTLDLKTIL
VSTAMGCITFLGVVIFCFLLLFVWSRGRGQHKNNFSMEYSFRKVDGPSASGGQVSGVVAG
DFTIHGNSLQIKLHVLDGLNLHLKHPLEEQTYPCHRFCMHVCEYYASTGVIKKKL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctttcctgtcttgggcttgctgggccttctactgcttcagatcacgcctcca
gtatgccatggccagggttgtccacaagtctgtgactgtgtaccccagagaaagtctgtg
aattgtcagaacaaacatctgaattcttttccaaatggaattccatctgacacaagattg
ctagacctgggtagaaaccagttgcgctgggtggagcatggtgacttgaaagtctacaca
cgtttggaggacttaaatcttagtgagaatctcatcagtgtacttgagcccaatgctttt
tccagcttacttaatcttcgcatattacgcctacgtgccaaccagttgaagctggtgcca
atgggtgccttctcacatcttgccaatctcacagttttggacttgagtggaaataaattg
gtcatattagtggattttacattccaggatctgcggaggctccaaaaattagaggtgggc
gacaatgatttggtgtatatttcaaacaaggcattcctgggcttgactggcctaagggaa
cttactattgagaggtgcaacctgacctctatttcagggcaagcactgtcctatctccgt
ggattggtgtcactacggctacgctacctcaatattgtctcattagaggagcataacttt
cataagctgggtggactgcggggtcttgagattgaccattggccatttttagagtacatt
tccccatatagtttccaaggtctcagtttatcctggcttttcattaccaacaccaacatt
actacagttccatcaggtgcccttcgtaatcttatccatttatccagtcttaatctgtcc
cacaatcccatttctgttcttgaatcttgggctttgcgtgatctggtcaatttaaaggaa
ttacaccttgtgggcaccaacctgatgtgcgtgcagccttatggccttggaggtctgcag
cagatacgtttacttaacctgtccaacaataggctagtaacactagaagaaggtactttt
cactctgtaaacaccttggaaatacttcggcttgatggtaaccctctgtcctgtgactgc
cgtttgctgtggatcttgcagcgtcggaagacccttaactttgacggcaagttcccagtt
tgtgcaagaccggttgaggtgctaggtaaagctcttagtgccttctctgacacagcactc
ctggatcactttacgtgtcagcgaccgaaaatccgcaaccgaaagctacaacagctatct
gcacgggagggtcagattgtatcattttattgtcaagcagatggagacccaacgccaacc
atcttctggatttcacctcagcgccgccgcatcactactagaagcactggtcgccttata
gtgttgccagagggcacattagaaatccactatgtccaaataacagatagtggaacctat
atttgcattgctagcaatgcaggaggtaatgacacctactttgccaccttaactgtcact
gggatacccttggatgcaggtctcttaccaaatcgctcctatgtaggtgacctcaatgac
agtaatctgaacgacacacgggtcttcctaaagttcacattagacctcaagaccattttg
gtctccacagcaatgggttgtataacttttttgggggtagtcattttctgcttcttgctt
ttgtttgtgtggagtcgtggacggggacagcacaaaaacaacttttctatggagtactcc
ttcagaaaggtggacggtccttcagccagcgggggccaagttagtggggttgttgcaggt
gactttaccatccacggtaacagcttgcaaataaaattgcatgttctagacgggttaaat
ttacatctcaaacatcctctggaagaacaaacatatccgtgccacagattctgtatgcat
gtttgtgagtattatgcaagtacaggtgtcataaaaaaaaaactctag
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