Tachysurus fulvidraco (yellow catfish): 113646132
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Entry
113646132 CDS
T08119
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfd04812
]
113646132 (katnb1)
Cytoskeleton proteins [BR:
tfd04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
113646132 (katnb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_RIG_1st
WDR54
Beta-prop_IFT122_2nd
PROPPIN
Beta-prop_IP5PC_F
Beta-prop_NUP159_NUP214
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_LRRK2
Ge1_WD40
RMC1_N
Beta-prop_WDR11_1st
Cytochrom_D1
PD40
Motif
Other DBs
NCBI-GeneID:
113646132
NCBI-ProteinID:
XP_027007954
LinkDB
All DBs
Position
2:23123979..23131399
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AA seq
672 aa
AA seq
DB search
MAASNIKKISWKLQDVVAHPSNVSSLVLGKSSSRLLATGGEDCKVNIWAVNKPNCIMNLT
GHTSPVECVQFSTSEEQVVAGSQSGSLRVWDLEAAKIFRTLPGHKANICSVDFHPFGEYL
ASGSMDTIIKLWDLRRKGCVFRYKGHAQAVRCLAFSPDGKWLASASDDSTIKLWDLTAGK
MITEFTAHTSAVSVVQFHPNEYLLASGSADRTIKLWDLEKFKMVGSSEGETSGRCLLFSP
DGVCLYSGSDEMLRVYGWEPDCCFDVVPVGWGKVLDFAICSSQMIGVSCSQTNVSLHVVD
LDRVKKSKAVQEQTGKPQADPIPIAVTLRRNYERPSTSCRRQKMKQSADGDKSVEGERQS
PSSEDERDEESRAEITNPDDYKEIFQPHNAISRTPPKRNDPFPAPLVDESFQTKPHVAEE
VMTTLPTEPKAPCSSATVTTIAPSQPVSVVAAPVSRHVVTTSKVKPSLAVSPSPLAEPLS
LIFGDILQHGRSEKSSVTADDEALSQIRKGHGTMCVMLTSRNKNLDIVRALWASGDIKLS
LNCATSMNDTSIVVDILNIINLKPSLWKLDICMSILPQLEELLQSKYESYIQTGCTSLKL
ILKRFWPLISDTLSAPPSVGVDITREERLQKCKTCYKQLKNLSNVVKNRAEHVGRHGSTF
RELQLLMAPLDF
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtccaacatcaagaaaatctcatggaagctgcaagatgtggtggcccacccg
agtaacgtgtcgtccctggtgttgggtaaatcgtcaagtcgcctgctggctacaggagga
gaggactgcaaagtcaacatctgggctgtcaacaaacccaactgcattatgaatctgaca
ggccacacgagccccgtggaatgtgttcagtttagtacctctgaggagcaggtggtcgct
ggatctcagtcaggatctctgcgggtctgggacttggaagcggcaaaaatatttcggaca
ttgcccggtcacaaggctaatatctgcagtgtcgactttcatccgtttggggaatacttg
gcctcgggctccatggatacaatcattaagttatgggatttgaggaggaaagggtgtgtg
ttcaggtataagggtcatgctcaagcagtgcgttgtctggcctttagccctgatggaaag
tggcttgcttcagccagtgatgacagcacaataaagctttgggatttaacggctgggaag
atgatcacagaattcacagcacacacctcggcggtttcagtcgtccagtttcacccaaac
gaataccttctggcttccgggagcgctgacaggaccataaagttatgggatttggagaaa
tttaagatggtcggctcatcggaaggtgaaacatccggaaggtgtctgttgttcagtcct
gatggtgtttgtttatacagcggctcggacgaaatgctgcgtgtgtacggctgggagccg
gactgctgctttgacgtggtccctgtaggctggggcaaagtgctggactttgcaatctgt
agcagtcaaatgatcggagtgtcgtgcagccagacgaacgtgagcttgcatgtcgtggat
ctggatcgagtgaagaaatccaaagccgtgcaggaacaaaccggcaagccgcaagccgat
cccatccctatagcagtgacgctaaggcgcaactatgagcggccttccacgtcctgcaga
agacagaagatgaaacagagcgcagatggagacaagtctgtcgagggcgagaggcagagc
cccagcagcgaggatgagcgtgatgaagagagcagagcagaaatcacaaacccagatgat
tataaagagatctttcagccccacaatgctatctcacgaacccctcctaaaaggaatgac
ccattccctgcaccacttgtagatgaaagtttccagacgaagccccatgtagcagaagaa
gtcatgactacgttgcctactgaacccaaggccccttgcagttccgccactgtaacgacc
atagcgccgtcacagccggtttccgtggtagcggcaccagtctcgaggcacgttgtcacg
acgtccaaagtcaaacctagcttagccgttagcccgtccccgctcgccgagccactcagc
cttatttttggggacattttacaacacgggcgaagcgaaaaaagcagcgtcactgccgac
gacgaggcgttgagtcagatcagaaaaggacacggcaccatgtgcgtgatgctgacgagc
agaaacaaaaacctggacattgtccgggctctctgggctagcggagacatcaagttatca
ctcaattgtgctacgtccatgaacgatacgtccatcgtggtggacatcctcaatataatc
aacctcaaaccgtcactttggaaactggacatatgcatgtccatcctgccccagctcgag
gagctactccaaagtaaatatgaaagttacatccagaccggctgcacgtctttaaagtta
attctgaagcgcttttggccgttaatctcggacacgctgagcgccccgccctctgtcgga
gtggacattacgcgagaggagaggctccagaagtgtaaaacgtgctacaagcagctgaag
aacctcagcaacgtagtgaagaaccgtgcagaacacgtgggtcgacacggtagtactttc
agagaacttcagctcctcatggctccattggacttctga
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