KEGG   Tachysurus fulvidraco (yellow catfish): 113646183
Entry
113646183         CDS       T08119                                 
Symbol
polr2l
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC5
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03020  RNA polymerase
tfd03420  Nucleotide excision repair
tfd04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113646183 (polr2l)
  09124 Replication and repair
   03420 Nucleotide excision repair
    113646183 (polr2l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tfd03021]
    113646183 (polr2l)
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113646183 (polr2l)
Transcription machinery [BR:tfd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     113646183 (polr2l)
  RNA polymerase III system
   RNA polymerase III
     113646183 (polr2l)
  RNA polymerase I system
   RNA polymerase I
     113646183 (polr2l)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113646183 (polr2l)
SSDB
Motif
Pfam: RNA_pol_N
Other DBs
NCBI-GeneID: 113646183
NCBI-ProteinID: XP_027008048
LinkDB
Position
2:complement(21967096..21972633)
AA seq 124 aa
MFLVVCVSLRNCFHPELVSFRAIFSVNTTNRKRHAFLVCFEERVVFSHAVCLCRRSDMII
PIRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLLNYA
PLEK
NT seq 375 nt   +upstreamnt  +downstreamnt
atgtttttagtagtttgtgtttctctccggaactgttttcaccccgaactcgtttctttc
cgtgccattttttccgtgaacacgacaaaccggaagcgacacgctttcctcgtttgtttt
gaagaacgtgttgtgttttctcacgcagtctgtttgtgcaggagatcagacatgattatc
ccaatccgctgcttcacctgtgggaagattgtagggaacaagtgggaggcttacctggga
ctcctacaggcagaatacacagagggagatgctctggatgctctgggcttgaagagatac
tgctgtcgcaggatgctgctgtctcacgtcgatctgatcgagaaactgctgaactacgca
ccactggagaaataa

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