Tachysurus fulvidraco (yellow catfish): 113646369
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Entry
113646369 CDS
T08119
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113646369 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113646369 (nup58)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113646369 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Tox-ODYAM1
MIC19_MIC25
FapA
Nup49_C
PSY3
Siah-Interact_N
GAIN_ADGRA3
NET2A_C
DUF3086
Motif
Other DBs
NCBI-GeneID:
113646369
NCBI-ProteinID:
XP_027008393
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All DBs
Position
25:complement(16906273..16923415)
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AA seq
592 aa
AA seq
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MSGFNFGTTALGTTNTGGFSFGAAGSAPAAGSGGFNFGGLGAAPSSTNTTTTTTSSLGLG
GNLFAQKPATGFSFNTPASGAVAPSTGLTLGTPATTSAPTAASTAGFGFGFGKPAASASP
FSLSTSSTSTAPAATGLTLGSVITSSAPQSGLSSGFSLNLGGGAVSSAPPTGLSLGSSLF
SSSTGLGQSTLGGGLTLGGLLSASTAATAPVAQVPSVGLGGVDFSTSSEKKSDKLSGARP
EDSKALKDENLPAPICQDVDNFQRFVKEQKQVQEEISRMSSKAMMKVQEDIKSLKQLLSV
SASGLQRNALSIDKLKMETAQELKNADIALRTQKTPPGLQHENSAPSDYFRGLVEQFEVQ
LQQYRQQIEELENHLTTQSSGSHITPQDLSLAMQKLYQTFVALAAQLQVVHENVKTLKHQ
YLSYRRAFLEDSTDVFESKRSANRKLQSSPRVTTGPTPFGSVPNAAAVAMAATLTQQQQP
APGSQAGFGTPFASSMGTSMGSSSLGAFGSGPAFGASATGGSAFGFSANKPSGGSLSAGF
GSSTTSGFNFSNPGINASAGLTFGVSTTQSAGFGTGVLQLKKPPAGNKRGKR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggtttaactttggaacaactgccctgggcactactaacactgggggcttttcc
tttggagcagcaggcagtgcccctgctgcaggatccggtggcttcaactttggtggtctg
ggtgcagctccttccagcaccaacactacaaccaccaccacctcgtccctgggcctcggt
ggcaacctgttcgcccagaaaccggccactgggttctcttttaacacacctgcctcagga
gctgttgcaccatccaccggcctcactttaggaactcccgccaccacttctgctccaacc
gccgcctccaccgcgggtttcggatttggttttggaaagccggcggcttcggcgagtccg
ttttctctgagcacctccagcacctccacggcccctgcagctactggtcttaccctgggc
tccgtcatcacctcatcagcacctcagagtggattatcttcagggttctcactcaacctg
ggaggaggggccgtttcctccgctccacccaccgggctcagcctaggctcctcgcttttc
tccagctcaacaggtcttgggcagtcgactctgggtggaggtctgactttaggtggtttg
ctctcagcctccacggcagctacggctcccgtcgcccaagtgcctagtgtggggttgggt
ggagtcgacttcagcacctcatcggaaaagaagagcgataaattatctggtgctcgacca
gaagacagtaaagcgctgaaagatgaaaacctgcctgctccgatctgtcaggatgtcgac
aacttccagaggtttgttaaggagcagaagcaggttcaggaggagatcagtcgcatgtcc
tctaaagccatgatgaaggttcaggaggacattaagagcctgaagcagctcctgtctgtg
agcgccagcggcctgcagaggaacgctctctctatagacaagctgaagatggagacagcg
caggagctgaagaacgctgacatcgcgctgaggacccagaaaactcctcctggacttcag
cacgagaactcggctccctcagattatttccgaggcctggtggagcagttcgaggtgcag
ttacagcagtaccgccagcagattgaggaactggagaaccatctaaccacacagagcagc
ggttctcacatcacccctcaagatctgtctctggccatgcagaagctctaccagacgttt
gtggctttggctgcgcagctgcaagtcgtccatgagaatgtaaagacgttgaagcaccag
tacctgagctacagacgagctttcctagaagactcgacggacgtgttcgagtcgaagcga
agcgccaaccggaaactgcagagttccccgagagtcaccaccggccctacgcccttcggc
tctgtcccaaacgccgctgccgttgccatggctgccacgctcacacagcagcagcagcct
gctccaggatctcaggcgggttttggcactccctttgcctcgagcatgggcactagtatg
ggctccagcagcctcggagcttttggtagtggcccggcgttcggcgcctcggcgacagga
ggctcagcgttcggtttttctgctaacaagccgtctggagggagcttaagcgcagggttc
ggaagctctaccacctctggctttaactttagtaacccgggaatcaacgcgtcggccggt
ctgaccttcggagtgtccacgacgcagagcgcgggcttcggcaccggagtcctacagctg
aaaaaacctccagcgggcaacaagagaggcaaaagatag
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