Tachysurus fulvidraco (yellow catfish): 113646434
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Entry
113646434 CDS
T08119
Symbol
tsc1b
Name
(RefSeq) TSC complex subunit 1b isoform X1
KO
K07206
tuberous sclerosis 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04140
Autophagy - animal
tfd04150
mTOR signaling pathway
tfd04218
Cellular senescence
tfd04910
Insulin signaling pathway
tfd05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
113646434 (tsc1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113646434 (tsc1b)
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
SulA
Laminin_II
Occludin_ELL
Sec8_N
Motif
Other DBs
NCBI-GeneID:
113646434
NCBI-ProteinID:
XP_027008491
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Position
21:complement(20037652..20057667)
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AA seq
1207 aa
AA seq
DB search
MAREQFNMGDLLPLLETSDLQHLEEIKGLINEHLSTERGSMLLNGLVDYFLETNSSPALH
ILCSVREPHDKHLFDKMNECMAKPACRLPTLNLLGHVVRKQPSWIHKIARYPLLLSLLKC
LKTDTDVVVLITGVLVLVTLLPMIPQAGKQHLYEFFDVFGRLAAWNLRNPGHVSEVFLIH
LHASVYSLFHRLYGMYPCNFISYLRSHCSMKENMDTFEEVVKPMLEHVRIHPELVTGTKD
HELDPTRWKRFEIHDIVIECAKVSLDPREASCEEGYATQPEHFCANLHMRAPDCTASPYT
DLHSSYGSSSSNHFSTPRQSGLPPLSLSSLSGTHLAHRSPPSTHRPSSTCEFNFIHGIKD
TLWSPSSLCGMATPPSSRGMSPNPELSQSAFHLSGRSYSTPGGGKGTPAASSPPPGVSDD
LPSSSMTHSTPNLQWKDGRLIDLTKPPLLRQEQIRELERSGSDVQNHRDGAAKNMSMTLT
ELSDYMKEQDQLRLGKEREEAAITEELMKLTEEKREASGARGFDSPFFRTTETLTGAQEK
PPTAFTHLRDPHHAVSTPDKIDMRIWCKGPGSRTASQEQPWSFQPLFTPIDLRHHSPSTE
DEALKSTPISPSPGRAPSSLPYEALFDLALPRTASLFMSRRSSEALERAAMQGTVGEVDE
GHGVTSASPLEVLDRLVQQGSDAHDRVLKRLPLPSKSADWTHFGGKQHNGSAPLDELQTL
RSQLLLLHNQLLYERYKREQHAVRNRRLLRRIINATALEEQNNAMKDQLNLQCVDIMSLR
ESLHMEQQRYRQLRDERETTVACLHSQIRQLQHDHDDYYTKYQELQSEMQECQKRMGEME
AELQKANNKVCHTGHQLNQLTAKLSSSESTQQQLSFMSRQLLLLGEAHKLCVQEQQQAGP
DLSKEVQMVQVSSTKEVERLKQNLTLQGQKLDAAQHRVAELETQLSKKEHLIAEQKKFLE
DVKGQAKEELKASESRYQAQRRVTQALQMELLQLYSRLEMEAPATTAVASSAGDATERCC
LTHASVAVASGGPMKTVSKERGKSSPHRNGFSPGQAKAGVPDPKSKPLNGSRATPPPMLV
EPPPACPAVPTSTPSLTVGSYPSAKSFLGMRARELFRNKSESQCDEDYAPRPQLTGLSQG
LKTDLCLEPSLKTAVKIGPTSSIHGHASSLVAKEPDILQRAPRREAGWPRQPQLHIMDYN
ETHQEHS
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggccagggaacagttcaacatgggtgacctgctccctctcttggagacctctgatctt
cagcatctggaggaaatcaaaggtctcatcaacgaacacctcagtacagaacgagggtcg
atgctcctaaatggcttggtggattatttcctagagaccaactcgagtccagcgctgcat
attctgtgttcagtgagggagccacatgacaagcaccttttcgataagatgaacgagtgc
atggcaaagccggcatgtcgtctaccgactctcaaccttctgggccacgtggtgcgcaaa
cagccgtcctggattcacaagatcgcccgctaccctctgctgctctcgctgctcaagtgt
ctcaagacggacacagacgttgtggttcttataaccggagtgctggtgcttgtcaccctg
ttacccatgatccctcaggcagggaagcagcatctgtatgagttttttgatgtttttgga
cgcctggctgcctggaacctgcggaacccaggccacgtttcggaggtgttcctgatccac
ctgcacgccagcgtctactcactcttccaccgcctgtatggcatgtacccctgcaacttc
atctcatacctgcgctctcactgcagcatgaaggagaacatggacacgttcgaggaggtg
gttaagccgatgctggaacacgttcgtatacaccctgaattagtgactggaactaaggac
catgagctggacccaactcgatggaaaaggtttgagatccatgatattgtgattgaatgt
gccaaagtgtctctggaccctcgggaggcgtcctgtgaagagggctatgccacccaacct
gagcacttctgtgccaacctgcacatgcgtgcccctgattgcactgccagtccttacact
gacctgcacagcagttatggaagctcatcctccaatcatttttccaccccgcggcagtct
ggccttcctcctctttctctgtcctctctctcagggacacatctggctcatcgcagtccc
cccagcacccaccggccgagctctacatgcgaattcaacttcatccatggcattaaagac
actctctggagcccttcttccctctgtgggatggccactccaccttcttcaagaggaatg
tcaccaaaccctgagctttcccagagtgcctttcacttatctggtcgctcctacagcaca
cccggaggtggtaaaggcactccagcggcatcgtctcctcctcccggcgtttcagacgat
ctaccttcttcctctatgacccacagtacacctaacctgcagtggaaggatggtagactt
atagacctcaccaaacctcccctcctgagacaggagcaaatcagagagcttgagaggtca
ggaagcgacgtccagaatcacagagatggtgcggctaagaacatgtccatgacgctgacc
gagttatccgactacatgaaggagcaggatcagctgcggctgggcaaagagagggaggag
gctgccatcacagaggagctgatgaagctgactgaggagaagcgcgaagcatcaggagca
cgtggctttgactcgccctttttccgcaccacagagactctcactggtgcacaagagaag
cccccaaccgctttcactcacctccgtgacccccaccatgccgtctctacacccgataag
atcgacatgcggatctggtgcaaaggcccaggtagccgtactgcgtctcaggagcaaccg
tggtccttccagccgctcttcaccccaatagatctacggcaccacagccccagcacagag
gatgaggctctgaaatctacacccatctcgcccagcccgggcagagcaccgtcatcgctg
ccttatgaggctctctttgacctggctctccctcgtaccgcttccctgtttatgagccgt
aggagctcagaggcgctggagagagctgcgatgcaaggcacggtgggagaggtggatgaa
ggccatggagtaacgtcagcatctcctctagaggtgcttgatcgtctggtgcagcaaggc
agtgatgctcatgacagggtactgaagaggttgcccctgccaagcaagtcagctgactgg
actcacttcggaggtaaacaacataatggctcagcacctctggatgaactgcagacattg
cgtagtcaactgctgttgctgcataaccagctgctgtatgagcgttataagcgtgagcag
cacgctgtgcgaaaccgccgcctgctgcgcagaatcattaacgccaccgcattggaggaa
cagaataacgcaatgaaggaccagctgaaccttcagtgtgtagatatcatgtctctgcgt
gagagcctacacatggaacagcagcgctacaggcagctaagggacgaaagggagactacg
gtcgcgtgcctgcacagtcagatccgccaacttcaacacgatcacgatgactactacacc
aaataccaggagttacagagcgagatgcaagagtgccagaagaggatgggtgagatggag
gctgagcttcagaaggcgaataacaaggtgtgccatacagggcaccagctgaatcagctc
accgccaagttgtcctcgagtgagagcacacagcagcagttgagcttcatgagcagacag
ttgctgctgttgggggaagcccataaactgtgtgtgcaagagcaacaacaagcaggccca
gacctcagcaaggaagtgcagatggtgcaggtgtcctcgacgaaggaggtggagcggctg
aagcagaacctgacgctgcagggtcagaagctggatgccgcacaacatcgagtagctgag
ctggagacgcaactgtccaagaaagagcatctcatcgcagagcagaagaagttcctggag
gatgtcaagggacaggctaaggaggagttaaaggcttctgaaagtaggtaccaagctcag
aggcgtgtgactcaggccttgcagatggagctgttgcagctctacagcaggctggagatg
gaggctcctgctaccaccgctgtagcttcatcagcaggggatgcaacagagcgctgctgt
ctcacgcatgccagtgtggcggtggcatcaggtggaccaatgaaaacagtctctaaagaa
cgcggcaagtcatcaccacacaggaacggcttctcgccaggtcaagccaaagccggcgtc
cccgaccccaagtctaaacccttaaacggcagccgcgccacacccccaccaatgctggta
gaaccgccccctgcttgccctgcggtgcccacctccaccccttccctcaccgttggctcc
tatcccagtgccaagagcttcctgggcatgcgagcaagggaacttttccgcaacaagagc
gagagccagtgcgatgaagattacgctcctcgtccacagctcaccgggctatcacaaggc
ctgaagactgatctctgtctggagccttcactaaaaactgcagtaaagataggtcccacc
tcctccatacacggacacgcctccagcttggttgctaaagagcctgacatcttacagaga
gcaccaagacgggaagcaggatggccgagacaaccacagctacatatcatggactataac
gaaactcatcaggagcacagctag
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integrated database retrieval system
