Tachysurus fulvidraco (yellow catfish): 113646465
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Entry
113646465 CDS
T08119
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X4
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04020
Calcium signaling pathway
tfd04080
Neuroactive ligand-receptor interaction
tfd04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113646465 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113646465 (grin1a)
04082 Neuroactive ligand signaling
113646465 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113646465 (grin1a)
Ion channels [BR:
tfd04040
]
Ligand-gated channels
Glutamate (ionotropic)
113646465 (grin1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
113646465
NCBI-ProteinID:
XP_027008544
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All DBs
Position
21:20222404..20251795
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AA seq
935 aa
AA seq
DB search
MSGFSTMRIFVILILLSCSCAPGGCETKIVNIGAVLSQKRYEQVFKDAVNQASVVYGRDR
FKLNAISVTHKANAIQMALSVCEDLISNQVYAILVSHPPQSSDHLTPTPVSYTAGFYRIP
VVGLTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQ
KRLETLLEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFNQETNLTALLLEAKELEAR
VIILSASEDDAAAVYKTARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNE
SAHISDAVAVVAQAIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGR
VEFNDDGDRKYAHYSILNYQKSRLIQVGIYNGTQVLLNKQRKIIWPGGDTDRPKGFQMST
WLKIVTIHQEPFVYVKPTMLDGTCKEEYTPNGVLIKKVICTGPNETIPGRPTVPQCCYGF
CVDLLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLT
INNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLY
LLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAG
FAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVE
LSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGF
GIGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFM
LVAGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDNKESSVSQVVGAAG
TPSLPSSSVETQDQYPPTDITGQLNLSDPSVSTVV
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtttttccaccatgcgcatttttgtgatcttgattcttctgtcctgctcctgc
gctccaggtggctgcgagacgaaaatcgtgaacatcggcgcggtgctgagccaaaagcgc
tacgagcaggtgtttaaggatgcggtgaaccaggcaagcgtggtgtacggcagagacagg
tttaaactcaacgccatctccgtcacgcacaaagccaacgctattcagatggcgctgtcc
gtgtgtgaggacctcatctccaaccaggtctatgcgattttggtgagccaccctccacag
tccagtgaccacctcacacctacaccggtgtcctacaccgccggcttctaccgtatccct
gtggtcggcctcaccaccaggatgtccatctactccgataagagtatccatctgtccttc
ctgcgcaccgtgccgccttactcgcaccaggcacacgtgtggttcgacatgatgcgtgag
ttccgctggaaccacatcatcctgatcgtcagcgacgaccatgaaggtcgagccgcacag
aagagactcgagacccttctggaggaaagggagaccaagaataaaaaaaggaactatgaa
aacctcgatcaactgtcctatgacaacaagcgaggacctaaggcagagaaagtcctccag
ttcaaccaagagactaacttaactgccctgctgctcgaggccaaggagctggaggctcgc
gtgatcattctgtccgccagtgaggacgacgctgctgcagtgtacaagacagctcggttt
ctcaacatgaccggctctggctatgtgtggctagttggagagcgggagatgtctggtaaa
gctctgagtgaagctcctgatggactaattggccttcagctcattaacggcaagaacgag
tcggctcacatcagcgacgccgtggcggtcgtggctcaagccattcaggagcttttcgag
aaggagaacattaccgaaccgcctcggggttgtgtgggcaacaccaacatctggaaaact
gggccactctttaaaagggtcctgatgtcatccaaatacccagaaggcctgacaggacga
gtggagtttaatgatgatggggacaggaagtacgctcattacagcatccttaactaccag
aagagcagactgattcaagtcggcatttataatggaactcaggtgctgctaaataagcaa
aggaagatcatctggcctggaggagatacagacagaccgaaaggtttccagatgtccaca
tggctaaaaatagtcacgatacatcaggagccttttgtgtacgtgaagccaaccatgctg
gatgggacctgcaaggaagaatacacaccgaacggagtattaattaaaaaggtgatctgc
actggaccaaatgagaccattccaggacgtccaacggtgcctcagtgctgttatggattc
tgtgttgacttgctgatcaagctggccatgactatgaactttacctatgaggtccatctg
gtggctgatgggaaatttggcacgcaggagagagtgaacaacagcaacaagaaggagtgg
aacggtatgatgggagagctcctgggtggcctcgcggacatgatcgtggctccgctaaca
ataaacaatgaacgagctcagtatattgaattctccaaaccgtttaaatatcaagggctc
actatccttgtgaaaaaggaaatccctcgtagtacgctggactcgttcatgcagccgttc
cagagcacgctgtggctgctggtgggtttgtcggtgcatgtggtggcggtgatgctttac
ctactagaccggttcagcccatttggaaggtttaaagtaaacagtgaagaagaagaagaa
gatgccctcaccttgtcttcggctatgtggttctcctggggagtgttgctgaactctgga
attggagaaggtgccccgcgtagcttctcagcgagaatcctaggtatggtgtgggccggc
tttgctatgattatcgtagcatcctacactgccaacctggctgccttcttagtgctggac
cggcctgaggagcgcatcaccggcatcaatgacccgaggttgaggaacccatcagacaag
tttatctacgccacggtgaagcagagctcggtggatatttatttccggcgtcaggtcgag
ctgagcaccatgtatcgccacatggagaagcacaactacgagagcgccgctgaggccatc
caggctgtccgggacaacaagctgcatgctttcatctgggactctgcggtgctggagttt
gaagcctcgcagaagtgcgacctggtgaccacgggagagctgtttttccgttcgggcttt
ggcataggcatgcgcaaggacagcccctggaaacagaatgtgtccctggctattctcagt
tcccatgagaatggcttcatggaggacctggataaaacctgggtgagataccaggagtgt
gactcaaggagcaatgccccagccacactgacctttgaaaacatggcaggggtctttatg
ctggtagctggaggcattgcagcagggatcttcctcatctttattgagattgcatacaag
agacacaaagacgcccgcaggaagcagatgcagctagcctttgcggccgtcaacgtctgg
agaaaaaacctgcaggacaataaggagagttctgtgagtcaagttgtgggcgcagctggg
actccgtctttaccctcttcctctgtagagactcaggatcaatacccaccgacagacatc
acgggccagctcaacctgtctgacccgtctgtcagcaccgtggtgtga
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