Tachysurus fulvidraco (yellow catfish): 113646650
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Entry
113646650 CDS
T08119
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03030
DNA replication
tfd03410
Base excision repair
tfd03420
Nucleotide excision repair
tfd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113646650 (rfc4)
03410 Base excision repair
113646650 (rfc4)
03420 Nucleotide excision repair
113646650 (rfc4)
03430 Mismatch repair
113646650 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfd03032
]
113646650 (rfc4)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113646650 (rfc4)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113646650 (rfc4)
DNA replication proteins [BR:
tfd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113646650 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
113646650 (rfc4)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
113646650 (rfc4)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113646650 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
113646650 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_30
AAA_assoc_2
AAA_11
AAA_16
AAA_22
DUF815
Mg_chelatase
AAA_14
Gp44_lid
DNAX_ATPase_lid
SLFN-g3_helicase
AAA_24
AAA_5
AAA_19
RuvB_N
Cdc6_lid
AAA_28
ResIII
AAA_7
Kinesin
UPF0176_N
RelA_AH_RIS
Motif
Other DBs
NCBI-GeneID:
113646650
NCBI-ProteinID:
XP_027008841
LinkDB
All DBs
Position
2:39249777..39259321
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGSAQSVKPQKDKATASSSGENKRQKPMPWVEKYRPKCVDEVAFQDEVIAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYKQRVLELNASDERGIQVIREKVKR
FAQLTVAGSRPDGKSCPPFKIIILDEADSMTGAAQAALRRTMEKESRTTRFCLICNYVSR
IIEPLTSRCSKFRFKPLANQIQQERLEEICRKENLKYSKEGIDALVKVSEGDLRKAITLL
QSTARLSAEKEITESIVIEIAGVVPPKVIENLLQTCYKGNFEKLEIAVKNMIEEGYAATQ
ILSQFHDIIIEEKLGDKQKSVITENMAVVDKCLVDGADEYLQLLHLCSVIMQQATQST
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcttttttgaaaggatctgcacaaagtgttaagccacagaaggacaaagccaca
gcttcgagcagtggagagaataagcgacagaaaccaatgccatgggtggagaaatacaga
cctaagtgtgtggatgaagttgcttttcaagatgaggtcattgcagttttgaagaaatca
ctagagggcgctgatctcccaaatcttctgttttatggtccacctggaacaggaaagacc
tccactatccttgctgctgccagagagctttatggcccagagctttacaaacagagagtt
ctggagctgaacgcctcagatgagagagggattcaggtgatccgggagaaagtgaagcgt
tttgctcagctcacggtggctggcagtcggccagatggaaaatcatgtcctccttttaaa
atcattattctggacgaggcggattctatgaccggtgcggcccaggccgctctcaggcgc
accatggagaaggagtcgcgcacaacccgcttctgtctcatctgtaactacgtcagcaga
atcatcgagcctttgacgtcccgctgctccaaattccgcttcaaacccctcgccaaccag
attcagcaggagcgtctggaggaaatctgcaggaaggagaatctcaaatacagtaaagag
gggattgatgctctggtcaaggtgtcagagggagatctccggaaagctataacactccta
cagagcacagccagactcagtgcagagaaagagatcacagagagcatcgtcattgagatc
gcaggggtggttccacccaaagtgattgagaatctgcttcagacttgctacaaaggcaac
tttgaaaaattagagattgctgtgaagaatatgatcgaagaaggctacgctgctacacag
atcctcagccagttccatgacattatcatcgaggagaaattgggggataaacagaagtct
gtcatcacagaaaatatggctgtcgttgataagtgcctggtggacggagctgatgaatac
ttgcagctgctgcacctctgctctgtgatcatgcagcaggccacgcagagcacctga
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