Tachysurus fulvidraco (yellow catfish): 113646700
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Entry
113646700 CDS
T08119
Symbol
pkd1l2a
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113646700 (pkd1l2a)
04091 Lectins [BR:
tfd04091
]
113646700 (pkd1l2a)
Ion channels [BR:
tfd04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113646700 (pkd1l2a)
Lectins [BR:
tfd04091
]
C-Type lectins
Others
113646700 (pkd1l2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Lectin_C
Ion_trans
SUEL_Lectin
GPS
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
113646700
NCBI-ProteinID:
XP_047663508
LinkDB
All DBs
Position
2:37463700..37486999
Genome browser
AA seq
2495 aa
AA seq
DB search
MDTHALSTHLLLVILSISAVYSEEDTETQICLEHQKAFEGSCYEFVTLQRSFLEAQRWCE
RGGGHLAFIQNDETQQFLHRHLQLEQDWWLGLAPSSFNFSMGSAATEGSLSWLDGSDVSY
SNWFREPEVGEACGYIMKQSGFQWASTENCSQELHFICEFESGHALACLEHNATLQCGSG
QVIEIDDSFYGRKTPHYCRAEHFLPDITLREECSWVDVVDMVSGHCHGLQVCQAVANVAS
FGEPCPGLGSYLSVDYHCKDGLHLLINKQAAVFQNITLATKWLLHPYQGNLTCTLNAGDG
HTIDPYMPEELQSIIVHRYQHAGVYTVTVECSTSEWHVTAQKTITIQEPVGEFSKIVCHS
SNQTTDSENCKGLNNHVLRIQVQLSAGTNITYKIQHGITELVRSSVVRGIVPHNITITQE
TLQLLGLGCHQLSLLAANGVTAPDVSVPLELCLVEPVDGLKASVAPEQDLCSDSALYVNV
SLDHGAPVEVFFLVSADNDSFSEIHRMLNGSLQMFRISSKIEGSMRIKVKASNLFTSMEV
EAGDTLLDCQADNSMGDHTGTLSGNILLITANPESPVVGTSSIMLDVNGLNGNANHYTFA
WNCSGTCPCNVSTQTKTHQINATCLPPPYSFSVYTVIAQKTTVQLEEQTASKCIFVSPGK
DLNPVITCSNCNPVNVNANVNLQLQCEGCQQIVWYFEDKSHVPDILRSCYSETGQKALIK
QKEGGSSFIIESEILVNAQQNINVVVYGVRDGLSGSTEFTIPIFGVSSTLFPTLLPNSQA
TNGQLASQTQAIVTESVITTSSTPFSSPTTAINPLKDSAPSCNINPTVGDIFSPFNILCT
VAPSFCKSGPCMYCFRTSTGDYLYCGHNQTVKSLFLPLGGGTNYTLVVAVTVENVEGEKI
NTTLSVQVNDVSTGPTVEDLQGFVSKQVDQMLQHGKLTGASLAQMFQSVSYRLNEDTPEG
QKQDAKMKLREEMLIDLGTAVNSAPLKNPGEVQKTADAVVSLTTQSEELTSTAQLQASSI
LSKLSLSLVSLTLSERDDQEVTRQAVTPIIQAASNILKVSARTDQQEVISENLLHAADNV
QSALLVGASVDQEPIIVSTSEISVYVNRMSPVALQKQSFSIEYNSSASFVLPSLGPNVLP
LEETVDLRMLSFAINPFPLRKGELISGAVASLSITRENGSVIPVSDLSEEIEIILPRPEA
EVNSTFLDLENYSTLIINVTTPNISLVLKLDPSEEIPLHLLLGFEHYPNNTHYKTTIQLP
QPGNSTEERYAWVLDSRDITLEVGVYYLLVRPIGSAGLNSSNASVYITSIAAQCKYWDET
ETTWSDYGCRVGPHTTTLHTQCLCTHLTFFGSSFFVMPNLVDVSRTAELFATFVNNPVVV
CFVGTIFLVYLIAVVWARRKDIQDTAKVKVTVLADNDPLAEYRYLLTISTGHRRGASTSS
QVTVTLLGSEGESEPHHLTDPEKPVFERGGTDMFLLTTPFSLGELQSIRLWHDNSGKHPA
WYVNKAMVQDLETGQKWHFLCSSWLAIDVGECTLDKVFPAATETDLKRFSNLFFMKTTKD
FQDGHIWFSVITRPPNSNFTRVQRVSCCFSLLLCTMLTSIMFWGIPTDPSEQTMDLGKIE
FTWQQVMIGIQSSIIMFPINLLIVSIFRNVRPRERATDQTPKKSKPASVKQGKTGRVSPT
QPPSPQSDHREITPDAVTKDIKRIAQSLSKALRSPMPMIDPEKMDINDLLSLVEDIICQQ
NRVGEFYSDASKKELAISLGAVNLHERSPENIPKEKHRIFRQYLYKQLQNVEKELRLLGP
SRFSKPESYIQAVLQVQGMKQLLEPYLSSSSNRDQISCSSSLGEHAGGDKKCCQKGLPWW
FVFVGWILVAATSGVSAYFTMMYGLTYGTDRSISWLISMVVSFFESLFITQPIKVLGFAV
FFALVLKTVDQEDYGDVSIEGALSSTDDPDNICIARRDSTCSFYQPPPPCDIEKMRNNMI
KEQKVFALIREILIYVGFLWMLLLVAYGQRDPNAFYLTQHIQQSFRTGIADSMNYKDVFS
WANTTLLNKVFGQQPGFITDGNSKLVGNARLRQVRVHKDSCRTSSFMSRSIRDCNAPYSW
EVEDMGSYGPGWNRSTDVNVSKSLLMPWWYQTQSRLRAHPIWGGVAFYRGGGFVVDLGPN
KQNARSLLRYLFESTWVDKYTRAIFVEFTVYNANVNLFCIVTLMFETTAVGAFQYRSDLQ
SVRLYQSTDGFHIFMMASEAIYFLFILYYMFQQGKLMKQHKWEYFRSKWNVLELAIIILS
WSALCVFIKRTLLGKRDIEYYQNHKDEHASFHETATADGVLGYLIAFLVLLATVKLWHLL
RLNPKLQMITATLHRAWNDISGFIIVMTIMLLAYSIACNLMYGWKLYSYHTLLHAAKTIV
SLQLGIFNYEEVLHYNPVLGAFVIGSCIIFMTFVVLNLFISVILVAFSEEQIHHKPSEEE
EIVDLMLMKICSLLGIRVKKNQFPEEPKAKPFAIT
NT seq
7488 nt
NT seq
+upstream
nt +downstream
nt
atggatacacatgctctctccactcatctccttttagtcattctcagcatcagtgcagtc
tacagtgaagaagacacagaaacacagatctgtcttgagcaccaaaaagcctttgaaggc
tcttgctatgagtttgtgaccctgcagcgaagcttcctcgaagctcaaaggtggtgtgag
cgtggaggtggacacttggccttcatccagaatgatgagacgcagcaatttctccacaga
catttgcaattagagcaggactggtggctaggcctggcaccttcctccttcaacttcagc
atgggctccgctgccacagagggttccttgtcctggctggatggatccgatgtgagttac
tctaactggttccgtgaacctgaggttggagaagcttgtggttacatcatgaagcaatct
ggatttcagtgggcatcaaccgaaaactgtagccaagagctccactttatctgcgagttt
gagtcaggacatgctctagcctgtctggaacacaatgccacgctacagtgtggctctggt
caggttatagagatcgatgacagcttctacggcaggaagacgccgcactactgcagggct
gaacattttctgcctgacataaccttacgggaggagtgcagctgggtcgacgtggtggat
atggtgtcggggcactgtcatgggttgcaggtatgccaggctgtagcaaacgtagcatcc
tttggagagccatgcccaggactaggaagctatttatcagtggattatcactgcaaagat
ggtcttcatctactgatcaacaagcaagctgctgtctttcaaaacatcaccttggcaaca
aaatggttgcttcatccttaccaaggaaatcttacatgtactttgaatgctggtgatgga
cacactattgacccctacatgcctgaagagttacagagtattatagtgcacagataccaa
catgctggagtgtatactgttacagtggagtgtagcaccagtgagtggcatgtgacagct
cagaaaaccatcacgatccaagaacctgttggggaatttagtaaaattgtgtgccatagc
tcaaaccagacaacagacagtgaaaactgcaaaggtcttaacaaccatgtgctgagaatc
caagtgcagctcagtgctggtactaacatcacatacaaaattcaacatggaatcactgag
cttgtacgttcttctgtagtcagagggattgttcctcacaacatcactatcactcaagaa
actttacagctgttgggcttgggatgccatcaacttagtctcctggccgccaacggagtg
actgctccagatgtgtctgttcctctggaactttgcttggtggagccagtggatggtctt
aaagcctctgtggcaccagagcaggacctgtgctcagactcagctctatatgttaatgtc
tctttggaccacggtgctccagttgaggtgttctttctggtgtctgcagataatgatagc
ttctccgagatacatcgcatgctaaatgggagtttacagatgttcaggatctcaagcaaa
atagaaggttcaatgcggataaaggttaaggcatctaacttgtttacctcaatggaagtc
gaagctggagatacactattggattgccaggcagacaattcgatgggagatcatacagga
acgctaagtggcaatatcttgctgatcactgcaaacccagagagcccagttgtaggcaca
agtagtataatgttggatgttaatggcctaaatggaaatgctaaccattacacatttgcc
tggaactgcagtggaacttgtccctgtaatgttagtactcagactaaaacccatcagata
aatgctacttgtcttccaccaccctacagtttttcagtttacactgtgattgctcagaag
actacagtgcagcttgaggaacagacagcaagcaaatgcatctttgtatctccagggaaa
gatttaaatcctgtcattacatgttccaattgcaacccagtcaatgtcaatgccaatgtt
aatctgcagttgcagtgtgaaggctgtcaacaaattgtttggtactttgaggacaaaagc
catgttcctgatattttgagatcctgctattctgaaacagggcagaaagccctgataaaa
cagaaagaaggtggcagttcttttataatcgagagtgaaattctagtcaatgcacagcag
aacataaacgttgttgtgtacggtgtaagagatggattatctggatcgactgaattcacc
atcccaatattcggtgtctcgtctactttgttcccaacattactacctaatagtcaagcc
acaaatgggcagcttgcgtcccaaacacaggctatagtcacagagtctgttataaccacc
tccagtactccctttagttctcccaccactgcaattaatcctttaaaagattcagcaccg
tcctgtaacattaaccccactgtcggagatattttctctcccttcaacatcctttgtact
gtggctccttcgttctgcaaatctggaccatgtatgtactgcttcagaacatccactggt
gactacttgtactgtggccataaccagacagtgaagtcactctttctccctcttggaggt
ggtactaactacaccctggttgtagcagtcactgttgagaatgtggaaggagagaagata
aacacaactttatctgttcaggtaaatgatgttagtactgggccaacagtggaggatcta
cagggctttgtgtccaagcaggtggaccaaatgttgcagcatgggaagctgacaggggca
tcactagcccagatgttccagtctgtgtcatacaggctgaatgaggacacacccgagggc
caaaaacaagatgcaaagatgaagctccgagaggagatgctgatagacctgggaacagct
gtgaactctgcccctctcaagaaccccggagaagtgcaaaagacagctgatgctgtagtg
agcctcactacacagagtgaagagttgacatctacagctcagttacaggctagttcaatt
ttgtcaaagctcagtttgtccctggtctctctcacactctctgagagggatgaccaagaa
gtaacaaggcaggcggtcacacccatcattcaggctgccagtaacatcctcaaagtttct
gccagaacagaccagcaggaggtcatctctgaaaacctgctacatgcagcagacaatgtc
caaagtgcactgctggttggtgcaagtgtagaccaagagcctattattgttagcacctct
gagatcagtgtgtatgtaaacagaatgtccccagtggcacttcagaagcagtccttcagt
attgagtacaacagctctgccagctttgtgctcccgtctttgggtcctaatgtgctgcct
ttagaagagacagtggatctacggatgctgagttttgcgataaaccctttccccttgagg
aaaggtgagctcatcagtggagcagtggcatctctgtccatcactcgagagaatggatct
gttatcccagtatcggacctcagtgaagagattgagattatcttgccgagaccagaggct
gaagttaacagtacatttctggacctggagaactacagtactttaattattaatgtgact
acaccaaatatatctctggttttgaaattggacccctcagaagagatacctttacattta
ctcctggggtttgaacactacccaaacaacactcactacaagaccacaattcagctgcct
caaccaggcaattcaacagaagagaggtatgcatgggtcctggattccagggatataaca
ctagaagtaggggtttactatcttctggtgaggcctattggatcagcaggtttaaactcc
tcaaatgcctcagtgtacatcacgtcgatagctgctcagtgtaagtactgggacgagact
gaaaccacatggagtgactatggctgcagggttggacctcacaccacaacactgcatact
cagtgcctgtgtactcatctaacatttttcggcagttctttctttgtcatgcccaacctt
gtcgacgtgtcccgcaccgctgaacttttcgccacgtttgtcaataacccagtagtggtg
tgtttcgtgggcactattttcctcgtctatctcatagctgtggtttgggctcgacgaaag
gacatccaagacactgcaaaggtgaaagtcacagtgttagctgataacgatcctttggct
gaatatcgctacttattgaccatcagtactgggcatcgccgtggagcatctacatcatct
caggttacagtgactctgctgggctctgagggagaaagtgagccccatcacctaactgac
ccagaaaagccggtatttgaaagaggaggaacggacatgttcctcctcaccacgccattc
tcacttggagagctgcagagcatcagattatggcatgataattctgggaaacatcctgca
tggtatgttaataaggcgatggtccaagacctggagacaggacaaaagtggcatttctta
tgtagttcatggctggctattgatgtcggagagtgcaccctggataaagtgtttcctgca
gcaacagaaactgacttaaaaaggtttagtaatctgttctttatgaaaaccacaaaagat
ttccaagatggtcacatttggttttcagtgatcactcggccacccaatagtaacttcacc
cgagtacagcgtgtttcgtgctgtttctctctgttgctctgtacaatgctgaccagcatc
atgttctgggggattcccactgacccttctgaacagaccatggatctggggaagatcgag
tttacctggcagcaagtgatgattggaatccagagctccattattatgttccccatcaac
cttcttatagtaagcatcttcagaaatgttcgaccaagagaacgagcaacagatcaaact
cctaaaaagtctaagcctgcttctgttaagcaaggaaaaacaggacgggtgtcgccaacc
caacctccgtctccacagagtgaccacagggagatcacgccagatgctgtaaccaaggac
atcaagaggatagcccaatctctctccaaggctctgaggagccctatgccaatgatagac
cctgagaaaatggatatcaatgatctcctgtcactagttgaagacattatttgtcagcag
aaccgtgtaggcgagttttactctgatgcctccaaaaaggaactcgccatctctctgggt
gctgtaaatcttcatgaaaggagtcctgaaaacataccaaaagagaaacacagaattttc
aggcaatatctctacaaacaacttcagaatgtggagaaagagctgaggctgctgggtcct
tcccggttctctaaaccagagagctacattcaggcagtgttgcaggttcagggcatgaaa
caattgctagagccatatctctcctccagctccaatagagaccagatctcctgtagctcc
agtctgggagagcatgctggaggtgataagaagtgctgtcagaaaggcttgccctggtgg
tttgtgtttgttggctggattcttgttgcagccactagtggagtgtcagcatatttcacc
atgatgtatgggttgacttatggaacggatcgctctattagctggcttatttctatggtt
gtgtcgttttttgagagcctcttcattacccagcctataaaggtgcttggatttgccgtc
ttctttgctctggtcctaaagacagtcgatcaagaagattatggtgatgtttcaattgag
ggtgctttatctagtacagatgatcctgataacatatgcattgccaggagggacagcaca
tgtagtttctatcagcctcctcctccttgtgatattgagaagatgaggaacaacatgatc
aaagaacagaaagtctttgcactcatcagggaaattctcatttatgtagggttcctctgg
atgctactcctggtggcttacggtcagcgagatccaaatgctttctacctcactcaacac
attcagcagagttttaggaccggcattgctgacagtatgaactacaaagatgtcttttcc
tgggcgaacaccaccctcctgaataaggtttttggacaacaaccaggctttatcacagat
ggaaactcaaagctcgtcggcaatgctcgactccggcaggttcgagtgcacaaggactcc
tgcaggacctccagcttcatgagtcgttccatccgtgactgcaatgctccatattcttgg
gaggttgaggacatgggctcctacggtcctggctggaaccgatcaacagatgtaaatgtg
tcaaagagtctcctcatgccatggtggtaccaaacccagtccagactcagggcgcatcct
atctggggtggggtggctttctacagaggtggaggctttgttgtggacctggggcctaac
aaacaaaacgcaagaagtttgcttcggtaccttttcgagagcacctgggtggacaaatac
actcgggctatctttgtggagttcacagtgtataacgctaacgttaacctcttctgtatt
gtcacgctgatgtttgagaccacagcagtaggagcattccagtaccgcagtgatctacaa
agtgtccgcctttatcagtcaactgatggttttcatattttcatgatggcctctgaagcc
atctattttctcttcattctttattacatgtttcagcagggaaagcttatgaaacaacat
aagtgggaatacttcaggagcaagtggaatgttttggagttagctatcattattttaagc
tggagtgcactgtgtgttttcatcaagaggacactgttgggcaaacgagacatcgagtac
tatcaaaaccacaaagatgaacatgctagcttccatgaaaccgccacagcagatggagtt
cttggataccttatagctttcctagttctgctggctacagtcaaactgtggcacctgctg
cgcctcaaccctaagctgcaaatgatcaccgcgacgcttcatcgggcttggaacgacatc
tctggcttcattatcgtcatgacaattatgctcttagcttactccattgcttgtaattta
atgtacggctggaagctttattcctaccacactcttctccatgctgccaagaccatcgta
agcttacaactggggatcttcaactatgaagaagttttgcattacaatcctgttcttggt
gcatttgtcattggttcttgcatcatcttcatgacgtttgtggttctaaatctgttcata
tccgttatcctggtggcattttctgaagaacagatacaccataagccatctgaagaggag
gaaatcgtggacctgatgctaatgaagatatgcagccttttggggatcagagttaagaag
aaccagtttcctgaagaaccaaaagcaaaaccttttgctataacttaa
DBGET
integrated database retrieval system
