Tachysurus fulvidraco (yellow catfish): 113646766
Help
Entry
113646766 CDS
T08119
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04517
IgSF CAM signaling
tfd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113646766 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113646766 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfd04812
]
113646766 (sptbn1)
Cytoskeleton proteins [BR:
tfd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
113646766 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
113646766 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CENP-K
CAMSAP_CH
PH_11
SOS1_NGEF_PH
SCAR_helical
Motif
Other DBs
NCBI-GeneID:
113646766
NCBI-ProteinID:
XP_047666565
LinkDB
All DBs
Position
2:complement(39516974..39601424)
Genome browser
AA seq
2349 aa
AA seq
DB search
MTTVAAEYDHMDIQQQYQDTVKNRWDEEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVVTEDNKEKRSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNVHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAV
MAVAKELEAENYHDIKRITARKDNVLRLWDYLLELLKARRQRLEMNLGVQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVRAVNTNAQKFAVDDDGY
KPCDPQVIRDRVAHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDVGKDLTGAVRLLSKHRALEDEMSGRAGHLQHTVREGQAMADAGHFGEVKIRERIAD
VQAQWAALEQLAAVRKARLEEACSLHQFQADADDVDAWMLDALRIVSSDDVGHDEFSTQA
LVKKHKDAAAEVASYRPVIDSLHEQAQALPNELGQSEDITGRLAGIEERYKELAELTRLR
KQALQDALALYKMFSEADACEVWIDEKEQWLNSMVIPEKLEDLEVIQHRFENLEPEMNNQ
ASRVAVVNQIARQLMHSGHPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYH
LDCNETKSWIREKTKVIESTQDLGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEAER
LAVEHPEQAKAITDRLAEIGTVWEEMKDTLQNREASLGEASKLQQFLRQLDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLAQHEGIKHEIDNYEEDYQKMRDMGEMVTQGQTDAQHMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAETFLNNQEYVLAHTEMPTTL
EGAEGAIKKQEDFMTTMDANEEKINGVVEAGRRLASDGNINAEKIQERATSIDDRHKKNR
EAAVELLMRLKDNRDLQKFLQDCQELSLWTNEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELQSNKEWLEKIEKEGMQLVSEKPETESVVKEKLSVLQTQWQDLESTTQTKAQCLFDANK
AELFTQSCTDLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVEELQS
QAHVLRQEGKDTDEVDGRRKVVEKKFQELLDPLEKRKKFLMASREIHQFNRDVEDEILWV
EERMPLATSTDHGNNLQTVQMLIKKNQTLQKEIQGHQPRCDDIFERSQSIVTVDTPSVDS
IRARLAELQDLWNLLIQEAAKRHERLEEAHQAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVADNHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDGVNRMADELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDVKEILSRILDKHKKLPEELGRDQNTVEALQRMHTTFEHDIQALGTQVRQ
LQEDAARLQSAYAGEKADDIQRRESEVLDAWRTLLEACEGRRARLLDTGDKFRFFNMVRD
LMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKH
YASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
REVGRSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRRQEEEERRRKPPT
PEPELEIEAQQREGEQIAQNGLPSDQDSPRDGVDGEIVNGVPERSSKEASPIPSPSSSRR
VKGSQSSTLPAKSQDSPSAQLEGFLHRKHEYEGHNKKASNRSWHNVYCVINNQEMGFYKD
NKNAGQGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRVTNGNEYLFQAKDDEEMNTWM
QAIQNAVSGSSPSDKSDVTPSNQSTPASSRAHTLPASVTLTTESSPGKREKDKEKDKEKR
FSLFSKKKQ
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgccgaatatgaccacatggacatccagcagcagtaccaggacact
gtcaaaaaccgctgggatgaggagtgggacaacgagaacagctcggcccgcctgttcgag
cgctcacgcatcaaggccttagcagatgagcgtgaagcggtgcagaagaagacctttaca
aaatgggtgaactcccacctggcgcgggtctcctgccgcattacagacctgtatatggac
ctgcgggatggacgcatgctcatcaagctcctggaggtgctttctggagagaagctgccc
aaacccacgaaggggcgaatgagaatccactgtctggagaatgtggataaagccttgcag
ttcctcaaggaacaacgcgtccatctggagaacatgggctcccacgacatcgtcgacggc
aaccatcgcctcacgctcggcctcatctggaccatcatcctccgtttccagatccaagac
atcagcgttgtaacagaagacaataaggagaagcgctcggctaaagacgctctgctcctg
tggtgccagatgaagacggcaggatatccaaatgtcaacatccacaacttcaccaccagc
tggcgcgacggcatggcgttcaacgccctcattcacaaacacaggccggatcttattgat
tttgacaagctgaagaagtccaacgttcactacaacctgcagaatgccttcaacttagct
gagcagcacctgggactcactaaactgctcgaccccgaggatatcagcgtggatcatcct
gacgagaagtcagtcatcacctatgtcgtcacatactatcactacttctccaagatgaag
gctctcaaggtggagggaaaacgtatcggcaaagtgctggataacgccatcgaaacagag
aagatgatcgagaaatacgagtctcttgcatcagatcttctggagtggattgagcagact
atcatcatcctcaacaaccgcaagtttgctaattctctggtaggggtccagcagcagctc
caggccttcaacacgtaccgcactgtagagaagcctcccaagttcacagagaaaggtaac
ctggaagtccttctgttcacaattcagagcaaaatgagagccaacaaccagaaagtttac
atgcccagagagggcaagctgatttcagacatcaacaaggcttgggagcgtctggagaag
gcggagcatgagcgcgagctggctctgaggaacgagctgattcgtcaggagaagctggag
cagctggcacgccgcttcgaccgcaaggccgccatgagagaaacctggctcagcgagaac
cagcggctggtgtcacaggataacttcggcttcgatcttcaggcagtggaggcggccacc
aagaagcacgaagccatcgagacggacattgcagcttatgaggagcgtgtgcaagcggtg
atggctgtggctaaagaactggaagcagagaactaccatgatatcaagcgcattacagca
cgcaaggacaatgtactgcgtctctgggactaccttctggagctgctgaaggcacgtagg
cagaggctggagatgaacctgggtgtgcagcgtgtcttccaggagatgctttacatcatg
gactggatggatgagatgaagatgcttctgctgtctcaggactatggaaagcatttgctg
ggagtagaagatctgcttcagaaacacgctctggtggaggctgatatcgccatccaggca
gaccgcgtgagggccgtcaataccaatgcccagaagtttgcggttgatgatgatggttac
aaaccatgtgatccgcaggtgatccgtgatcgtgtggctcacctggagttctgctaccag
gagttgactcagctggcggctgagcgccgtgcacgtctggaggagtctcgtcgtctctgg
aagttcttctgggaaatggctgaggaggagggctggatccgtgagaaggagcagatcctg
tcatccgatgacgttggaaaggacctgacaggtgccgtacgtttgctgagtaagcaccga
gcgcttgaggacgagatgagcggtcgcgctgggcacctgcagcacacggtacgtgagggt
caggcaatggctgacgctggacacttcggagaggtgaagatccgtgagcgcattgctgac
gtgcaggctcagtgggcagcattggagcaactcgcggcagtccggaaggcacgtctagag
gaagcctgcagcttacaccagttccaggctgatgctgatgatgtggatgcatggatgctg
gacgcgctgcgcatcgtctcaagcgatgatgttggccatgatgagttctccacgcaggca
ctggtgaagaagcacaaagatgcagcagccgaggtggctagctaccgacccgttatcgac
tcactccacgagcaggcccaggcgctgcctaacgagctgggccaatcagaagacatcacc
ggacgcttggctggcatcgaggagcgctacaaggagctggcagagctcaccaggctgagg
aaacaagctctgcaggatgcactggctctttataagatgttcagcgaggctgacgcctgc
gaggtttggatcgacgagaaggagcagtggcttaacagcatggtgattccagagaaactg
gaggaccttgaagttattcagcacaggtttgagaatctggagcctgagatgaataaccag
gcttcccgcgtcgccgtggtcaatcagatcgcccggcagctgatgcacagcggacacccc
agtgagaaggacatcaaggctcaacaggacaaactgaacaccaggtggagccagttcaga
gatttggtggaccagaagaaggagtccctgaactcagcactgggtgtgcagaactatcac
ctggactgcaacgagaccaagtcatggatccgcgagaagaccaaagtgatcgagtccact
caggacctgggtaacgatctgacaggagtcatggcactgcagcgcaagctgacggggatg
gagcgcgacctggctgcaatcgaagccaagctgggtgatctgcgtggagaagccgagcgt
ctggcagtggaacatcctgaacaagccaaggctatcaccgacaggctggcggagatcgga
acagtctgggaggagatgaaggacaccctgcagaaccgcgaggcctctctgggtgaagca
agcaagctgcagcagttcctccgccagctggatgacttccagtcatggctgtctcgcacg
caaacggccatcgcctctgaggacatgcccaacaccctggcagaggctgagaaacttctc
gcccaacacgaaggcatcaagcacgagatcgacaactatgaagaggactaccagaagatg
cgagacatgggcgagatggtgacccagggccaaacggatgctcagcacatgttcctgagg
caacggctgcaggcacttgacaccggttggaatgagctgcataagatgtgggagaaccgt
cagaacctcctgtcccagtctcacgcctaccagctgttcctcagagacacaaagcaggct
gagacattcctcaacaatcaggagtatgtgttggctcacactgagatgcccaccactcta
gaaggagcagaaggtgctattaagaagcaggaggacttcatgactacgatggacgccaac
gaggagaagatcaacggagtggtggaggccgggcgcagactggccagcgacggaaacatc
aacgcggagaagattcaggagcgagcgacttccattgatgacagacataagaagaaccgt
gaggcggctgtagagctgctgatgagacttaaagataaccgagacctacagaagttcctg
caggactgccaggagctttctctgtggacaaatgagaagatgctgacggcgcaggacatg
tcatacgatgaggccagaaacctgcacagcaagtggctcaagcaccaagccttcatggct
gagctccagtcgaacaaagagtggctggagaagatcgagaaggaagggatgcagctggta
tctgagaagcctgagacggagtccgtggttaaggagaagctgtcggtgctgcagacgcag
tggcaggacctggagtccaccacacagaccaaagcacagtgtctgttcgacgccaataag
gccgagctgttcacgcagagctgcaccgatctcgacaagtggctggggggtctggagggt
cagatccaatcagacgactacggcaaagatctaaccagcgtcaacatcctgctaaagaaa
caacagatgctggagaaccaggtggaggtgcgtcagagggaggtggaggaacttcagtct
caggcccacgtgttgcggcaggagggcaaggacacggatgaggtggacgggcggcgcaag
gtggtggagaagaagttccaggagctgctcgatcctcttgagaagaggaagaagttcctc
atggcttctagggagatccaccagttcaaccgcgacgtcgaggatgaaatcctctgggtg
gaggagaggatgcctctcgccacttcaacagaccatggcaacaacttacagactgttcag
atgttaatcaagaagaaccagaccctgcagaaggagatccagggccatcagccgcgctgt
gacgacatcttcgagcgcagccagagcatcgtgacggtggacaccccgagcgtggattcc
atccgagcgcgtctcgctgaactgcaggatctctggaaccttctcatccaggaggcagcg
aagaggcacgagcggctggaggaggcccatcaggcgcagcagtactacttcgacgcggct
gaggcggaggcctggatgagcgagcaggagctttacatgatgtcagaagagaaagctaag
gatgagcaaagctctgtggccatgctgaagaaacaccagatcctggagcaggcggtggag
gactacgccgagaccgttcatcagctctccaagaccagccgcggcctggtggctgacaat
caccccgagagtgagaggataggcatgcggcagtcacaggtggataagctgtacgcggga
ctgaaggacctttcagaggagaggagaggaaagttagacgagaggttcaggctcttccag
ctgaaccgcgaggtggatgatctggagcagtggatcgccgagagagaagttgtagcagga
tctcatgaactgggccaggactatgagcatgtcactatgctgcaggagcgtttccgtgag
ttcgcccgcgacaccggtaacatcggtcaggagcgcgttgacggcgtaaaccggatggcc
gacgagctcatcaacgcgggtcatgccgacgccgccaccgtcgcagagtggaaggacggg
ttgaacgaggcctgggcggatcttctggagctgatcgacactcgcacgcagatcctggcg
gcttcctacgagctgcataagttctaccacgacgtcaaagagatcctgagccgcatcctg
gacaagcacaagaagcttccagaagagctcgggcgagaccagaacacggtggaggcactc
cagaggatgcacaccaccttcgagcacgacatacaagcactggggacgcaggtcaggcag
ctgcaagaagacgcggcacgtttgcagtctgcgtacgctggcgaaaaggctgacgatatc
cagcggagagagagcgaggtcctagatgcatggcggacccttctggaagcctgcgaaggg
cggagggcacgtctgcttgacaccggagacaagttccgctttttcaacatggtacgtgac
ctcatgctctggatggaggatgtgatccgcctcatcgaggctcaggaaaaccccagggac
gtatcatctgtggagctgctcatgaacaatcaccagggcatcaaggccgagatcgacgct
cgtaacgacagcttcaccgcctgcatcgagctcggcaagtctctgctggcacgcaagcac
tacgcatcagaggagattaaagaaaagttgctacagttgaccgacaagaggaaagaaatg
atcgacaaatgggaagacagatgggagtggctaagactgattttggaagtgcaccagttt
tcacgggacgctggggtagctgaagcgtggttgctgggtcaggagccgtacctgtccagt
agggaggtgggtcggagcgtggacgaggtggagaagttgatcaagaggcacgaggcgttc
gagaagtcagccgctacctgggaggaacgcttctctgcactggagagactgactacgttg
gagttactggaagtgagaagaaggcaagaagaagaggagagaagaagaaaacccccgacc
ccagagccggagctggagatcgaggcacagcagagagaaggagagcagatcgctcagaac
ggactgccgtcagaccaggattctccacgggacggagtggacggagaaatcgtgaacggt
gtgcctgagaggagctctaaagaggcgagccccatcccgtccccaagctcaagcagacgc
gttaagggcagtcaatcgtccaccctgccggccaaaagtcaagattctccctccgcccag
ctggagggcttcctacaccgcaagcatgagtatgagggacacaataagaaggcatccaac
agatcctggcataatgtctactgcgttataaacaaccaagagatgggcttctacaaagac
aacaagaacgccggacagggcatcccgtaccataacgagatccccgtcagcctgaaggac
gccgtctgtgaggtcgcagtcgactacaagaagaagaaacacgtcttcaaactgagagtg
acaaacggaaacgagtatctcttccaagccaaagatgatgaggagatgaacacatggatg
caggctattcagaacgcagtcagtggctcctctccttcagacaagtctgatgttacgcct
agcaaccagagcactcccgcatccagccgcgcccacacactccctgcgtccgtcaccctg
acaaccgagtcgagcccgggcaagcgagaaaaggacaaggagaaagacaaagagaagcgt
ttcagtcttttcagcaaaaagaagcagtag
DBGET
integrated database retrieval system
