Tachysurus fulvidraco (yellow catfish): 113646838
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Entry
113646838 CDS
T08119
Symbol
rabgef1l
Name
(RefSeq) RAB guanine nucleotide exchange factor (GEF) 1, like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113646838 (rabgef1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113646838 (rabgef1l)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113646838 (rabgef1l)
Protein recycling
Other Rab GTPase associated proteins
113646838 (rabgef1l)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
113646838
NCBI-ProteinID:
XP_027009103
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Position
22:16591447..16600984
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AA seq
472 aa
AA seq
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MSLKTARRGIYVDQAALLCNKGCGFYGNSAWGGLCSKCWRLEHPNSRAKQIEEDHKLAER
LQREEEAAYAGSNQGAQSGNSPPSLSKPEAKRNSQKSHPVPSGKKFFATLAKTKSRDVNV
PSQLPPPSTSIDQQPVAGTDQATRQFIDFLKTVQKPGRDIFRQCHAFCHSVAYKKDLSAE
DLSESVQDFYQNLSERLNNLFKGSPERVEAIMDEVEKYITLQLYEQAFCPESADDEAKDL
TIQKRIRALHWVTVQMLGAPVKEEIPAVSDSLDKAITDIIEMDSKRVPRDKLAYVTRCSK
DIFRAIKYSNKDAASADDFLPVLIYVVLKANPPRLQSNIQYITRFCNPRRLMSGEDGYYF
TNLCCAIAFIEKLDAQSLNLSTEEFELYMSDHVSPDRPQARACSYPSSSSSQSAGRLEND
LIEWGDGMEASVQDVLKELHLDSCTPSTSAIDSDNVESEGLPPPLQPQVFAG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgaaaactgcacgacgagggatctacgtggatcaggcggctttgctgtgcaat
aaaggctgtggtttttatggcaattcggcctggggaggtctctgttccaaatgttggcgt
ttggagcatcccaactcacgagctaagcagattgaggaggaccacaaactagccgagaga
ctgcaaagagaagaagaggcagcttacgcaggtagcaaccagggggctcaatcagggaac
tcgcccccaagtctgagcaaacccgaagcgaaaaggaacagtcaaaaatcacaccctgtc
ccatcaggaaagaaatttttcgccacgcttgcaaagacaaaaagcagagatgtcaacgtt
cccagccagctgcctcctccgtcaaccagcatcgaccagcagcccgtcgccggaacggac
caagccacgagacagttcatcgatttcctcaagacggtgcaaaagcctggacgggatatt
tttagacagtgccatgctttctgtcacagtgtagcttacaagaaggatcttagtgcagag
gatctctccgaatccgtgcaagacttttaccagaacttgtctgagcgcttaaacaacctc
ttcaaaggaagtccagagcgagtagaagcaataatggacgaagtggagaagtacataacg
ttgcagttgtatgaacaagctttctgtcctgaatctgcagacgacgaggctaaagatttg
accatccagaagagaatcagggctttacactgggttacggttcagatgctgggagcccca
gtgaaagaggagattcctgctgtgtcagacagtctggacaaagccattacagatataatt
gagatggactccaagcgtgtacccagggataagttggcttacgtcaccagatgcagcaag
gacatcttccgcgccattaagtacagcaacaaagatgccgcgtcagctgacgacttcctt
ccggtgctgatctacgtggtgctgaaggccaacccaccgcgactgcagtccaacatccag
tacatcacccgattctgcaaccccagacgtctcatgagcggcgaggacggatattatttc
accaacctgtgctgtgccatagctttcatagagaagttggatgctcagtctctaaacctg
tctacagaggaatttgaactctacatgtctgaccacgtgtcccctgacaggccacaggcc
cgtgcatgctcttatccttcatcctcttcatcacagagtgccggcaggttggagaacgac
ctcatcgaatggggagacggaatggaggcctctgttcaggatgtcctgaaagagcttcac
ctggactcttgtaccccgtccacctctgcgatcgactcggacaacgtagagagcgagggg
cttccgcctcctctgcagccccaggttttcgctgggtag
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