Tachysurus fulvidraco (yellow catfish): 113646901
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Entry
113646901 CDS
T08119
Symbol
nbn
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03440
Homologous recombination
tfd04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113646901 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfd03032
]
113646901 (nbn)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113646901 (nbn)
DNA replication proteins [BR:
tfd03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
113646901 (nbn)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
113646901 (nbn)
BRCA1-C complex
113646901 (nbn)
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Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
113646901
NCBI-ProteinID:
XP_027009189
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Position
3:26349784..26362572
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AA seq
816 aa
AA seq
DB search
MWRLHPTDPGTGPITLLDGKEHVVGRKNCDILLPNDQSISRVHALITVTEQAVTLKDCSK
YGTFVNDKRLETGSTKAVYAGDKLTFGVFQSKFRLELDSVVVCSSCVDNEGKATLSKDVQ
ALGGRLVNSWSQECTHLVMPAVKVTIKTICALLCCRPIVKPQFFTELSRAVQQKENLPKA
ESFRPEIDEPSIAKEKVDLGPCHERKTLFAGKTFVFLNTKQMKRLSQAIGFGGGRSQLLE
EGSLPVSLLESTGICVVDMATGSSQAPMTPTIKNWTNSVSSILHRNGLRFIAESEIGLAA
IYVNIQTYCNPCCSLDSQSVNMRPAIPESTLSQSAAVDETVLHGASINITAYVVNTEPSQ
CIGRMDICEATAVGETPEKRPTVNPLGATTFKKLPKATELPAACSEPVSSGDVKEGKKAK
SESQKSAECNKYSGTFKKSPQKQASLTSYFKPPIKKRQREGSTESELSDAKLSRREDEES
NSHLAPSLQKSSVSRLDSKLAQNQHDTTPRYGSSGSLGLGSFLATDSKSGGLQQNVSLNL
DLNYSSKKRKEPEQEPVALVDLDVSLEELESIMSEDMDAPEPAAKKKQLLDQGGRCTATA
EEDCSDPFSKQSKAEKQQRIGSTSLNSEQDTRGLARTAQVTSSKTKGSEQERQGSTSGND
RRKTADVKEEEVSFLLETKVPNGFDKHSEVSAVKEEPTASSSGSAPEKDPELPSKLLQVQ
FMSLTVRAPSRTRAEPLQSRDTNRKNFKRFRKVPVPGLQGLPKIIGGSDLVAHNRSKNSE
LEEWLKDAAEQEKQQERDETLGDDLFRYNPRTTKRR
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtggagactacaccctacagatccggggacaggcccaatcactttgcttgatggtaag
gagcatgtagtaggtcgtaagaactgtgacatccttctgcccaatgaccagtcgatcagc
cgtgtacatgccctcatcactgtcactgagcaggctgtcacgctgaaagactgctccaag
tacggcacttttgtcaacgacaagcggctagagactggatccaccaaggctgtctatgca
ggggacaaactgacatttggggtttttcagagcaagtttaggctagaactggattctgtg
gttgtttgttcatcgtgtgtcgataatgaagggaaagcaactctctccaaggacgtccag
gctcttgggggacgtctggtcaactcctggtctcaggagtgcactcacctagtcatgcct
gctgttaaagtcaccataaagacgatctgcgcgctgctgtgctgccgaccgatagtgaaa
ccccagttcttcaccgagctctccagagctgttcagcagaaggaaaaccttcccaaagcg
gagagcttcaggcctgagatagatgaaccgagcatcgctaaagagaaagtggacctggga
ccatgtcatgagagaaagactctgtttgcaggcaaaacctttgtctttctcaacaccaaa
cagatgaagcgcttaagccaagctattggttttggaggtggaagaagtcagcttttggag
gagggatctcttccagtgtcacttctagagtccacaggaatttgtgttgtcgatatggct
acaggatcttcccaagcaccgatgactcctactatcaagaactggacaaattctgtcagc
tcgattctgcacagaaatggtttacgtttcattgctgagtcagagatcggattagctgcc
atttacgtcaatattcagacatactgcaatccctgctgttctttggattcacaatccgtt
aatatgaggccagcaatccccgaatcgacactttcccagagcgcagccgtggacgagacc
gtgcttcatggagcctcaataaacatcactgcctacgtggttaatacagagccatctcag
tgtatcggcaggatggacatatgcgaggccacagctgtgggcgagaccccagaaaaacgt
ccgactgtaaatccgctgggtgcaacaacatttaagaagctgccaaaggccacagagctg
ccagctgcctgctctgagcccgtttcatccggtgatgtaaaggaaggaaagaaagccaaa
tccgaaagccagaagagtgctgaatgtaataaatacagtggcacatttaaaaaatccccg
cagaagcaagcatcactgacttcctacttcaagccacccattaaaaagaggcagcgcgaa
ggcagcaccgaatccgaactatcagacgccaaactctctagacgagaggatgaggaaagc
aactctcatctggctccttctctacaaaaatcctcagtttccagattagattcaaaacta
gcccaaaaccagcatgacacaaccccacgctatggttccagtggcagtctcggtttgggc
tcttttctcgctacagattccaaatcaggtggcttgcaacaaaacgtgagcctgaattta
gatctgaattacagttccaagaagaggaaagagccagaacaggagcctgtagcacttgtc
gatttagacgtttctctggaggaactcgagtccatcatgtctgaggacatggacgcgcct
gagccagcggctaaaaagaagcagcttttggatcaaggaggaagatgcacagctactgca
gaggaggattgtagtgacccgttcagcaagcagagcaaagcagagaaacagcaacgcata
ggcagtacaagcctgaactctgaacaggacacgcgaggtctagcgagaacggcacaggtc
acgtctagtaagacgaaggggtcggaacaggaacggcaaggttcaacaagtggaaatgac
agacgtaaaaccgcagacgttaaagaagaggaagtttcttttcttttggaaaccaaggtc
ccgaatggcttcgacaaacacagtgaagtgtctgcagtgaaggaagaacccacggcctca
agctcaggctctgctcctgagaaagatcctgaacttcctagtaagcttttgcaagtccag
tttatgtccctgaccgtgagggcccccagcaggacgagggccgagccactacagagccgt
gatacgaacagaaagaatttcaaacgtttccgtaaggtccctgttcctggacttcagggc
ttacctaaaatcattggaggctctgatctggttgctcataaccgcagcaaaaactcagaa
cttgaggagtggctgaaggatgcagctgagcaagagaaacagcaagaacgtgatgagact
ctaggtgatgacctgttcagatacaatccaaggactactaaaagaagatga
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