Tachysurus fulvidraco (yellow catfish): 113646908
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Entry
113646908 CDS
T08119
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113646908 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113646908 (nup98)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113646908 (nup98)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113646908 (nup98)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113646908 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
113646908
NCBI-ProteinID:
XP_027009207
LinkDB
All DBs
Position
21:complement(3339207..3353363)
Genome browser
AA seq
1801 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGASSTFGQQNTGFGAAGGFGASAFGATNNTGGLFGATQNKPGG
LFGSSTFSQPVTSSTSSGFGFGATSGGTSNSLFGSTNTGSGGLFSQQGNAFSASKPASFG
TFGTSTSSGGLFGTTNTTSNPFGAASSLFGSSGFTAAQPGTTIKFNPPTGSDTMVKSGVT
TSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPSNTGGLFGATATATPSTATGLFGS
TGPGFSFNQAKPSFSAGTSGFGATPGGLFGQPAPANSLFKPFGQPTTTQNTGFSFGGTNT
MGLANTSSMGLFGNTAASQAGGLFGNTANTSTAAGFGTGTGLFGQPSTGFGNVGTQNLFG
NKPAGFGTTTTSAPSFGTGTGLFGNKPTLTLGTNTNTFGFGANPAGGSLFGNKPATGTLG
TGLGAGFGTGVGTGTTSLFGNNQNKIGSTLGTVGTFGGPSFNTGNSSLNFGAPQQPVALT
DPNAAAQQAVLQQQLNALNYSPFGDSPLFRNPLSDPKKKEERLKPTNPAAQKALTTPTHY
KLTPRPATRVRPKALTSSGSGKSQLFDGLDDEEPSLTNGAFMPRRSIKKLVLKNLNGSSL
YSSPLNREVDDLNSPSEYPQNGLSLRADAEETQDIEGEGGAEDDLHVSKFYPNPIVKSIP
HNQPSPSLQDTITELNMRRVVSVRNGLDLSSEEISLGDDSVQEERDEELEAQRPPHPAGI
VLTRIGYYTIPSMEELGKMLNENGECIVENFTVGRKGYGSVFFPGEVNLTNLNLDEIVHF
RRKEVIVYPDDNDKPNAGDGLNRRAEVTLDGVWPNDKTTRVQIKSPQRLSEMNFEERLEN
ASRKQGARFLEYRPETGSWVFEVTHFSKYGLQDSDEEEDISQAKTETKKLKTAIQAGLQQ
IPLSQQHQQMAPQAQSTAVLELLSRVPELDSDMADITQEPPADGLLFEEDDSVLEDDTRM
ALRPATPTEPEPISASSQIASSLGINPHTLQIMKASLFAGDDDCDLFHEQLPPKLLEVSS
PQLLIGQAQARLSVGSRLQSKFTSFGGLFSHLPEVPFGASPQKPSKPDVPEAPWPSLGTS
IMLPLPVPEVTLRTVGARRLGGPVPMANSVTSGKGRLMMDAALYMGRSFRVGWGPNWTLV
HCGNPLSTSEESKDQTKDVLGFGFLPKPTKTWQINESPFKVHVEQVVGMEPKEKAQSLSV
YHKPLEIGLKHSTISTDDICPFILPEKGVNALHDYAEWIVEVLKQAGAGDVVLSHWQQVW
TLCEALWGRLGEQDLEPEVGGGYREQHARRHSFSRWLSESAAQCIQEEVNQCKTQSHVEA
IFSYLTGHCISEACRLAQKNGDHRLSLLLSQAVGSQISRDLLALQLADWNRMQTDSFIHE
ERLHIFALLAGKPVWETTDCCINVCSRLDWKRCLAVHLWYMLPPTASVADALSKYETAFQ
GSEEGIKYACAPLPPYMDNIDQETLEEMEDTESNKTLYDICFHLLKLYSDKHYSLQQLLD
PTTVTPEQLDYRLSWHLWNVLQALNYTHLSVPRQNLLHTSYAAQLESTGLWEMAVFVLLH
IPDSLLRERAVREVLNQHCTLEETEETAEKEHFLTNKLLIPMQWIHEAKATRASRDGDRH
REALHHYRAGHWNHCHRLVIQNLASDCIINDDHEYLKEFLEGLAVPERSVQIQDWDTSGR
VYLDYIRVIQTLNTIQRTDSPGYELERLHTDVTSLCSRIELLPCFKAKDRLAQSEMAKRL
ANILRVVLSLQQGGEGPPDPRHIPLCHLAPHIGRLPLPEDYALEELRSLTQSYLREYVVS
H
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcgttcggtactcccttcgggggaggaacaggaggatttggggcttca
tctacgtttggacaacagaacacagggtttggtgcagcaggtggttttggtgcctctgca
tttggagccacaaacaacaccggtggtctctttggagcaacacagaacaaacctggaggg
ctctttggctccagcacgttcagtcagcccgtcacttcgtccacaagcagcggatttggg
tttggtgcaacaagtggtggtacctcaaacagcctctttggaagtactaatacaggaagt
gggggtcttttctctcagcaaggcaatgcattcagtgccagtaaacctgcctcttttggt
acgttcgggactagtaccagcagtggagggttgtttgggacaactaacaccacctccaat
ccattcggagcagcctcgtctttgtttggatcctcaggcttcacagctgcccagcctggc
acaaccatcaaatttaatccaccgacaggaagtgacacgatggtaaagagcggtgtgacg
accagcatcaacaccaaacatcagtgtatcacagccatgaaggagtacgaaaacaaatct
ctggaggagctacggttagaggattaccaggctgggagaaagggaccctccaacacaggt
ggcctgtttggggctacagccaccgcaacaccaagcactgctaccggtctgtttggctcc
acgggtcctggcttcagcttcaaccaggccaagccctccttcagtgctggtacaagtgga
tttggggcgactccgggtggcttattcggccagccagctccggctaatagtctcttcaag
ccctttggtcagcccaccacgacccaaaacacagggttctcattcggtggcaccaatacc
atgggcctggcaaataccagcagcatgggtttgtttgggaacactgctgcctcacaggcc
ggaggtttgtttggaaacacagcgaacaccagcacagcggctggcttcggcacgggcact
ggactctttgggcagcccagcacaggctttgggaatgttggtacacagaatttgtttgga
aacaagcctgctggttttggtaccaccacaacgagtgctccttcctttggcacaggaaca
ggcctgtttggcaacaaacccacactcacacttggcacaaatacaaacacttttggtttt
ggtgccaatcctgctggaggcagcctgtttggaaacaaacctgctactggtacattagga
acaggacttggagcaggttttggaacaggtgtaggtacagggacaacgtctctgtttgga
aataaccagaacaagattggctccactctagggacagtgggcacatttgggggacctagc
ttcaacacaggaaacagcagtctgaactttggagcaccgcagcagcctgtcgctctgacg
gatcccaacgccgcagctcagcaagcggtgctacagcagcagctcaacgctcttaactat
tcaccttttggggattctcccctttttagaaacccactctctgatcccaagaagaaagaa
gagcgcctgaagcctacgaatccagctgcccagaaagccctaacgacccccacgcactac
aagctcacccctcgtcctgccacgcgtgtgcgccctaaggccctcacctcttcaggttct
gggaaatctcagcttttcgacggcctagacgacgaggaaccatctctcacaaacggagcc
tttatgcccaggaggagcataaagaaacttgtgttaaaaaacttgaatggaagcagtctg
tacagcagcccactgaacagagaggtcgatgacttgaactctccgtcagaatatccgcag
aacggcctcagtctgagagcagatgcagaggaaacccaagatatagagggtgaaggagga
gcagaggatgatctgcatgtctccaagttctatcccaaccccattgttaagtccatccca
cacaaccagcccagtccctcgctgcaagacaccatcaccgagctgaacatgaggagagtc
gtcagcgtccgtaacggcctggacctcagcagcgaggagatctctttgggagatgacagc
gttcaggaagagagagacgaagagctggaggcacagagacctcctcacccagctggtatc
gttctcacacggatcggttactacaccatcccgtccatggaggagctggggaagatgctg
aatgagaacggggagtgtattgtcgagaacttcacagtcggaaggaaaggctacgggtca
gtcttcttcccaggcgaagtaaatttgaccaacctgaatcttgatgaaatcgtgcacttt
agacgaaaggaagtaatcgtctaccccgatgacaacgataagcctaacgcaggagatggc
ctcaacagacgagcagaagtgacgctggatggcgtttggcccaacgacaaaaccacccgt
gttcagatcaaaagtcctcagcgtctgagcgagatgaacttcgaggaacgtctggagaat
gcttcacgcaagcagggtgctcgcttcctggaatacagacctgaaactggctcctgggtg
tttgaggtcacacatttttccaagtacggcctgcaggactctgacgaggaggaagacatt
tcccaggctaaaaccgagacgaagaagttaaaaacagccatccaggcaggactgcaacaa
attccactgtcccagcagcaccagcagatggcgcctcaagctcagagtacggccgtgctg
gagcttctgagccgtgtgccggagctggacagcgacatggcggatatcacccaggagcct
ccagcagatggactgctgtttgaggaggacgacagcgtgctggaggatgacacgaggatg
gctctaagaccagccacccctactgagccagagcccatctctgcttccagtcagattgct
tcctctttaggaatcaacccacacacacttcagattatgaaggcgtccctgtttgcgggt
gacgacgactgcgacctctttcacgagcagctccctccgaaactcttagaggtttcgtct
cctcagcttttaatcggtcaagcccaagccaggctatcagtgggtagccgcctccagagc
aaattcacctcgtttggagggctgttttcccatctgccagaggttccttttggagcaagc
cctcaaaagccgagtaaaccagatgtcccagaagccccatggccttcgctgggcacctcc
attatgttgcctctccctgttcctgaggtcactctgaggaccgttggagcacgcagactg
ggtggccctgtgccaatggctaactctgtcactagcggaaaaggtcgtttgatgatggac
gcagcgctgtacatgggacggtcttttagggtgggatggggtccgaactggacactagtg
cattgtgggaatcccctgagcacatctgaagagtcaaaggatcagaccaaagacgtcctg
ggcttcggcttcttgcccaaacctaccaagacctggcaaatcaatgaaagccctttcaaa
gtacacgtggagcaggtggttggcatggagcccaaggagaaggcacagagcctgtccgtg
taccacaagcccctcgagatcgggctcaagcacagcacgattagcactgatgatatctgc
cctttcatcctgccagagaaaggcgtgaacgcactgcacgattacgccgagtggattgta
gaagtcctcaagcaggcaggagctggagatgtcgtactcagccactggcaacaagtgtgg
actctgtgtgaggctttatggggacgtcttggagagcaggacttggagcccgaggttggc
ggaggttacagagagcaacatgcgagaagacacagtttctctcgctggctatctgaaagc
gcagcccaatgcatccaggaggaagtgaaccagtgtaagacacagagtcacgtcgaagcc
atcttcagctacctgactgggcattgtatcagtgaggcttgcagactggcccagaaaaat
ggagaccatcgtctgtccctgctgctgtcccaggcggtgggttctcagatcagcagagat
cttttggctctgcagctagcagactggaacagaatgcagacagactctttcatccatgag
gagagattgcacattttcgctctacttgcaggcaaacctgtttgggagacgacagactgc
tgtataaatgtgtgctctaggctggactggaagcgctgtttggctgtgcatctgtggtac
atgctgcctcctacagcatccgtagcagacgctctctccaaatacgaaaccgcctttcag
ggttcagaagagggaataaaatacgcatgtgctcctcttccaccatatatggataacata
gaccaggaaactttagaggagatggaagatacagaatctaataaaaccctctatgacatc
tgtttccatcttctcaaactttacagtgacaagcactacagcctgcagcagctgctggat
cccactacagtgactccagagcagctggactataggctaagttggcacttgtggaacgtc
ctgcaggccctgaattacactcacttgtcggtgccaagacaaaatctgctccacactagc
tatgctgcccagctcgagagcacaggcctctgggagatggctgtttttgttctcctgcac
atccctgactccttacttcgagagcgtgccgtgcgggaggtcctgaatcagcactgcacc
ctggaggagacagaggagaccgcagagaaggaacacttcctcaccaacaagctgctcatc
cccatgcagtggattcatgaagccaaggccacccgggcaagcagggacggagaccggcac
cgcgaagcactgcaccattaccgggccggacactggaaccactgccaccgacttgtcatc
cagaacctggcttcagactgcatcattaatgatgatcatgagtatctgaaggagtttctg
gaaggcttggcagtgcctgagcgcagtgtacagatacaggactgggacacatcaggacgt
gtgtatttggactatatccgtgttattcagaccctgaataccattcagaggacggacagc
ccggggtacgagctggagcggctacacaccgacgtcacgtccctgtgcagcaggattgaa
ctccttccctgtttcaaagccaaagacagactggcccagtcagaaatggccaaacgtctg
gctaacatcctgcgtgtggtgctaagccttcagcagggtggagaaggcccaccggatcct
cgtcacatccccttgtgtcatcttgcaccccacatcgggcgcttacccctgccagaagac
tacgctctggaagaacttcgcagcctcacccagtcttacctacgcgaatatgttgttagt
cactga
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integrated database retrieval system
