Tachysurus fulvidraco (yellow catfish): 113646962
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Entry
113646962 CDS
T08119
Symbol
gria1b
Name
(RefSeq) glutamate receptor 1b isoform X1
KO
K05197
glutamate receptor 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04080
Neuroactive ligand-receptor interaction
tfd04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113646962 (gria1b)
04082 Neuroactive ligand signaling
113646962 (gria1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113646962 (gria1b)
Ion channels [BR:
tfd04040
]
Ligand-gated channels
Glutamate (ionotropic)
113646962 (gria1b)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
113646962
NCBI-ProteinID:
XP_027009282
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Position
21:complement(4446981..4527050)
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AA seq
917 aa
AA seq
DB search
MEPSLALLLTSFLGWCSCSSFPSNINIGGLFPTDSHEYEVFRFALSQQHELPKLVPQVDM
VDVGSSFAMTYAFCSQFSKGVYAIIGLYDKKTMNMLMSFCGALHVCFVTPSFPIDTNNQF
VIQLRPQLQDALIGLVEHYKWTKFVYMYSSDSGLTVLQKILDTAAEKSWQVTSINFDTLT
EAAFLNSIQDLDTKKENKIILDCELERLNSILNLIAAQRKNLKNYHFILANLGFLDLNLT
DFRKGGANITGLQLMNYTDPRVSRTIDDWLEFDSKDLKSPKRRLKYTGALTYDGVSVMAT
AFQNLRKQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVQFEGLTGHVQFNEKGHRT
NFTVSVMELVQSGPKKVGYWNENEKYVSTATYAPLLNETFGMHNRTYIVTTILESPYVML
KKNHEHLSGNDKYEGYCVELAAEIAKHVGYSYKLELVPDGKYGARDPDSKMWNGMVGELV
YGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMC
IVFAYIGVSVVLFLVSRFSPYEYHGDESEEGGEQQSQNRTPSPEPGQSQGQQGQSPSQQD
KQERGPEYNNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTAN
LAAFLTVERMVSPIESAEDLAKQTEIAYGTLDGGSTKEFFMRSKIAVFEKMWSYMKFADP
SVFVKTTDEGVKRVRKSKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSD
LRNRVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIG
GLGLAMLVALVEFCYKSRIQSRRMKQIIDAAMLGSSLSHMGSGGENGRVVAHDFPKAAQT
LPCMGQAAGMGINTGGM
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggagccaagcctggccttattgctcaccagcttcctcggctggtgctcgtgctcgagt
ttcccaagtaacattaatataggcggtttgttcccgaccgactcgcacgaatatgaggtg
ttccgatttgcgctctctcagcagcatgagctccccaaactggtgccacaagtggacatg
gtggacgtgggcagcagtttcgccatgacatacgcattttgttcccagttctctaaggga
gtctacgccatcatcggtctgtacgacaagaagaccatgaacatgttgatgtcgttctgt
ggggctctgcacgtctgcttcgtcacacccagcttcccaatcgacaccaacaatcagttt
gtaatccagctcaggccccagctccaagatgctctgattggccttgtggaacactacaag
tggaccaaattcgtctacatgtatagttcagattcaggactgaccgttttacagaagatc
ctggacactgctgcagagaagagctggcaagtgacatccatcaactttgatactcttaca
gaggcagcattccttaactccattcaggacctggacaccaaaaaagaaaacaagatcatt
ctggactgtgagctagagagacttaactccattcttaacctgattgcagcacaaagaaag
aatctgaagaattatcacttcatcctggcaaacctgggctttctggacctgaatttaaca
gatttcaggaaaggtggagccaacatcacaggattgcagctaatgaactacacagaccct
agggttagcaggaccatcgacgactggctggagtttgacagcaaagacttgaagagccct
aagaggagactcaagtacacaggagcgctcacctatgatggtgtgagcgtcatggctact
gcttttcaaaacctcaggaagcaacgtatcgacatctcccggcgggggaacgcaggcgaa
tgtctggccaaccctccagcaccgtggggccaaggcatcgacatccagagagccctccaa
caggtgcagtttgaaggtctgacaggacacgtccaattcaacgagaaaggacatcgaact
aactttacagtcagtgtaatggagctcgtccagagtggacccaagaaggtgggctactgg
aacgaaaacgagaagtatgtgagcacggcgacgtacgcccccttgctcaacgagacgttc
ggcatgcacaataggacgtacatagtcaccaccattctagaatctccctatgtgatgctg
aagaaaaatcacgagcacctgtcagggaacgataagtacgagggatactgtgtggagctg
gctgccgagatcgccaaacacgtaggctactcctacaagctggaactcgtaccagacggc
aagtacggagcccgagaccccgattccaaaatgtggaacgggatggttggagagctggtg
tacgggaaagctgacatagccgtggctcctctcaccatcactctggtccgagaggaggtc
atcgacttctccaagcccttcatgagcttgggcatttctataatgatcaagaaacccacc
aaatccaaaccaggcgtcttttccttcctggacccgctggcgtacgagatctggatgtgt
atcgtgtttgcgtacatcggcgttagcgtggtcctgttcctggtgagccgcttcagtccg
tatgagtatcacggcgatgaatcagaggaaggtggcgagcagcagagccagaaccggacg
ccgtctccggaacccggacagtcgcagggacaacaaggccagagccccagccagcaagac
aagcaggaaagaggacccgagtacaacaatgagtttgggatcttcaacagtctgtggttc
tctctgggtgccttcatgcagcaaggctgcgatatttcaccaagatcactctctggtcgt
atagttggaggcgtctggtggttcttcaccctcatcatcatctcctcctacacggccaac
ctggctgccttcttgactgtagagaggatggtgtcacccatcgagagcgcagaagacctg
gccaagcagacagagatcgcctacggcaccttggatggaggatcaaccaaagagttcttc
atgagatcaaaaatagccgtgtttgagaagatgtggtcctacatgaagtttgcagatccc
tcagtgtttgtaaagaccaccgacgagggagtgaagagagtgcgcaagtccaaatacgct
tatctgctggagtccaccatgaacgagtacatcgagcagcgtaaaccctgcgatactatg
aaggtgggcggaaacctggactcaaaagggtatggggtcgccactcctaaaggatctgac
ttaagaaaccgagtaaacctggcagtgttaaaactgaacgagcagggcctgttggacaaa
ttgaaaaacaaatggtggtacgacaagggcgagtgcggcagcgggggaggtgattccaag
gataagaccagtgccctgagcctcagtaatgtggcaggggttttctacatcctgattgga
ggactggggctagccatgttggtggccttggtcgagttctgttacaagtccagaatccag
tctcggagaatgaagcaaatcatcgatgcagcaatgttgggctccagcctgagccacatg
ggcagcggaggtgagaacggccgtgtggtggctcacgattttcccaaagcggcacagact
ctgccctgcatgggccaagcagccggcatgggaatcaacaccggcggcatgtaa
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