Tachysurus fulvidraco (yellow catfish): 113646965
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Entry
113646965 CDS
T08119
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfd03009
]
113646965 (ddx52)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113646965 (ddx52)
Ribosome biogenesis [BR:
tfd03009
]
Eukaryotic type
90S particles
Helicases
113646965 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SecA_DEAD
AAA_19
Motif
Other DBs
NCBI-GeneID:
113646965
NCBI-ProteinID:
XP_027009287
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Position
21:complement(2945499..2957181)
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AA seq
611 aa
AA seq
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MDAVELFKRLGAGAKFDLKRFGRDAERFKVGKFQNKEITSPLTEISYFGKTREPAEESRH
GCRDDEDEEHNSDEDHHTVVDETLSSLKKKRKGNKRKTQDSEDERSHDEDSEQTGIRWTS
SQDKKAEGAKKKVTDGPSIKRLKQLHKEKLNQIRHQNRINVHGTDIPDPLCTFEELQQEY
ELDSRIIQNIKAAGFQTPTPIQMQAIPLMMHRREILACAPTGSGKTVAFCLPVLAHLRQP
LNKGFRALIVAPTRELASQTHRELLKLSEGVGFRVHMINKGVDAAKKYGPKSAKKFDILV
TTPNRLIYLLNQEPPAVDLSSVEWLVVDESDKLFEDGKTGFREQLAAIFLACTSPKVRRA
LFSATFTTEVEQWCKLNLDNLVSVNIGPRNSAAETVEQELLFVGAENGKLLAMRDLIKKG
FLPPMLVFVQSIERARELFHELVYEGINVDVIHAERTQQQRDNVVSSFRAGKIWVLICTA
LMARGIDFKGVNLVVNYDFPTSAVEYIHRIGRTGRAGHKGKAVTFFTEADKPLLRSIASV
IKQAGCPVPDYMIGFKKLKSKVKRHLEKKPPRRATIRTMPRILMQKNPGQVKRKKGKSEA
RPNGGEADDKK
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtggagttgttcaagaggctcggagccggcgcaaagtttgatttgaaacga
tttggcagagatgcggaaaggtttaaggtaggaaagtttcagaacaaagaaatcaccagt
cctttgactgaaattagctactttgggaaaaccagagagccagctgaagaatccagacat
ggttgtagagatgatgaagatgaagagcacaactcagatgaagatcatcacacggttgtg
gatgaaacgctgagctcgctgaagaaaaaaaggaaggggaataaaaggaaaactcaggat
tctgaagacgagcgtagccatgacgaggattcggagcagactgggattaggtggacgtct
tcgcaagacaagaaggcggaaggtgcgaagaaaaaggttacagatggaccatcgataaag
aggttaaagcagcttcataaagagaagctcaatcagatccgacatcagaacaggattaac
gtgcacggtacagacatcccggaccctctctgtacgttcgaagagcttcagcaggagtat
gagctggattctcggatcattcagaacatcaaagcggctggatttcagaccccgacgccc
attcagatgcaggccatccctctgatgatgcacagacgagaaatcctggcgtgcgctccc
acgggctcaggaaaaaccgtagccttctgcctgcctgtgctggcgcatctccgtcagccg
ctcaacaagggtttcagagcgctcatcgtagcacccacgagagagctggccagccagacg
cacagagagctcctgaagctgtctgagggagtgggcttcagggttcacatgattaataaa
ggagtggacgctgccaagaaatacggtcccaagtcagccaagaaatttgacatattggtg
acgacgccgaacaggctgatctacctgctgaaccaggagcctccagctgttgatctgagc
agcgtggagtggttggtggtggacgagtccgacaagctgttcgaggacggtaagaccggc
ttcagggagcagctggccgccatcttcctggcctgcacctcaccgaaagttcgccgcgct
ctcttcagtgccactttcaccaccgaggtcgagcagtggtgcaaactcaacctggacaat
ctcgtctccgtgaacatcggacccaggaactctgcagcagagacggtggagcaggaactg
ctgttcgtaggagcagaaaacggcaagctgctcgcaatgagggacctgataaagaagggc
tttcttcctcccatgctggtgtttgtacagtctatagagcgagccagagagttgttccat
gagctggtgtacgagggcatcaacgtcgatgtgattcatgctgagcgaacgcaacagcag
agagataacgtggtcagcagctttcgtgcaggtaaaatctgggtgctcatctgcacggcg
ctcatggctcgtgggatcgatttcaaaggcgtcaacctggtggtgaactacgactttccc
accagtgctgtggagtacatccatcgtatcggccgcacaggacgagcgggtcataaaggg
aaagccgtcacgtttttcaccgaggctgacaaacccctcctgcgcagcattgcctcagta
ataaaacaagctggatgtcctgtgcctgattacatgattggattcaagaaactaaaaagc
aaagtgaagcgacatcttgagaagaaacctccgagaagggcaacgattcgcaccatgcct
cgcattctcatgcaaaagaatcctggccaagtaaaaaggaaaaagggaaaatctgaggca
agaccaaacggcggcgaagcagatgataaaaaataa
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