Tachysurus fulvidraco (yellow catfish): 113647018
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Entry
113647018 CDS
T08119
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113647018 (copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113647018 (copa)
Membrane trafficking [BR:
tfd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
113647018 (copa)
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113647018 (copa)
Exosomal proteins of bladder cancer cells
113647018 (copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
113647018
NCBI-ProteinID:
XP_027009348
LinkDB
All DBs
Position
1:complement(18017416..18029833)
Genome browser
AA seq
1231 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILASLHNGIIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRLW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDTE
VRGITGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENSVLLCTRATNLENSTYDLYSIPRESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLNIDPTEYRFK
LALVNRKYEEVLHMVRNSKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQGALYLGDVSERVRILKNCGQKSLAYLTAATHGMDEEAEALKETFDL
EKEMIPEVDPNAELLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGRAGQMAADLDMDTP
GGEGWGEDAELHLDEDGFMDAQEGLGDEGALGKEEGGGWEVEEDLDLPPELDVPAGAGGG
AEGEGFFVPPTKGISPTQMWCNNSQLPVDHILAGSFETAMRLLHDQVGVVCFEPLKPLFM
QAYSRGRVSYVGLPSLPCLFSHPLRDGGTAEGRRQRDGQKGGVPAVGLHLRDLIARLQQC
YQMTTAGRFDEAVDKFRSILLSVPLLVLDNKQEIAEAQQLITICKEYIVGLTMETERKRL
PKETLEQQKRQCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLKNFKTAAGFARRLLELGP
KPEVAQQTRKILAACEKNLTDAYQLNYDPHNPFDLCAASFTPLYRGRPVEKCPLSGACYC
PTYKGQVCRVTQVTEIGKDVIGLRVSPLQFR
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgttaaccaaattcgagaccaaatcagctcgagtgaaagggctgagtttccacccgaag
cggccgtggattctggccagtctgcacaatggcatcatccagctgtgggactatcgcatg
tgcactctcatcgataagtttgatgagcatgatggtccggtgagagggatcgacttccac
aagcagcagcctctgtttgtctctggtggagatgattacaaaataaaggtgtggaactat
aagctccgtcgttgtctcttcactctgcttggacacctggactacattcgtaccaccttt
ttccatcatgagtacccatggatcctgagtgcctcagatgatcagaccatccgtttgtgg
aactggcagtcccggacctgtgtctgtgtcctgacaggtcataaccactacgtgatgtgt
gctcagttccacccatcagaggacctggtggtgtcggccagtctggatcagaccgtgcgg
gtgtgggatatctctggtttgaggaagaagaacctttctcctggtgctgtggatacagaa
gtgcgtggcatcactggtgtggatctgtttggagcatcagacgctgtggttaaacatgta
ctggagggtcatgatcgaggggtgaactgggcagcgtttcatcccagcatgcctctgatt
gtgagtggagctgatgatcgccaggtgaagatctggaggatgaacgagtcgaaggcgtgg
gagctggacacctgcagggggcactacaacaacgtatcctgcgccgtcttccacccacgt
caagagctcatcctgtccaactctgaggataagagcatccgtgtgtgggacatgtccaag
aggaccggggtccagaccttccgcagggaccatgatcgcttctgggtgttgggggctcat
cccaacctcaacctgtttgctgcaggtcatgacagcgggatgttggtgtttaagttggag
cgtgagcgtcctgcttacgccgtttatgggaacatgttgtattacgtcaaggaccgcttc
ctgcgtcagctcgatttcaacagcagcaaagatacagcggtcatgcagctgcgcagcggc
tccaagttccctgtgttcagtatgtcatacaatcctgctgagaactctgtgctgctgtgt
actagggcgactaatctggagaacagcacatatgatctgtactccatccctcgagagagc
gactcacagaaccctgacgccccagagggaaagcgctcatcaggactcacagccgtgtgg
gtggcccgcaatcgctttgccgtattggaccgcatgcactcgctccttataaagaacctg
aagaacgagattgtgaagaaggtgcaggtgccgagctgtgaggagatcttctacgcagga
acaggttctttactgctgagggacgcagacggagtcacgttgttcgacgtgcagcagaag
cgctcgctcgctactgtcaaaatcgccaaagtcaaatacgtggtgtggagcgcagacacc
agccatgtcgccctactggccaaacacgccattatgatctgcaacaggaagttagagagt
ctgtgtaacattcacgagaacatccgcgtgaagagcggtgcgtgggacgagagcggcgtg
tttatttacaccacctccaaccacatcaaatacgccctcacctcaggtgatcacggtatc
atccgcaccctggacctgcccatctatgtgacccgtgtgaggggcaatagcgtgtactgt
ctggatcgcgagtgcagacctcgcgtcctcaacatcgacccgaccgagtaccgcttcaaa
ctcgcactcgttaaccgcaaatatgaagaggtgctgcacatggtgcgtaactctaagctg
gtgggtcagtctatcattgcgtacctgcagaagaagggctacccagaggtggcgctacac
tttgtcaaggatgagaaaactcgcttcagtctggcgctggagtgtggaaacatcgaggtg
gcgctggaggcggccaaggctctggacgagcggagctgttgggaacgtctgggcgaggcg
gctctgctgcagggacaccaccaggtggtggagatgtgctaccagagaaccaagaacttc
gacaaactcaccttcctctacctcatcactgggaacctggccaagctccgcaagatgatg
aagattgctgagatcagaaaggacatgagtggacattatcagggagctctgtatctgggg
gatgtcagcgagagagtgcgcattctcaagaactgtgggcagaagtctttggcgtacttg
actgcagcaacacacggcatggacgaggaggcagaagcactcaaagaaacctttgacctg
gagaaggagatgatcccagaggtagacccgaacgctgagctgcttcagcccccccctccc
atcaatcccctggacacaaattggcccctgctcaccgtctctaagggcttctttgagggc
gccatcgctgctaaagggagagcaggtcagatggcagccgatctggacatggacactcct
ggaggagaaggatggggtgaagatgcagagctccacctggacgaagatggctttatggat
gctcaggagggtctgggtgatgaaggagctcttgggaaggaggaaggaggaggatgggag
gtggaggaagatctggaccttccacctgaactggatgtgccagctggtgctgggggcggt
gctgaaggtgaaggcttctttgtcccgcccactaaaggcattagccccacccagatgtgg
tgtaacaactcccagttgccggttgatcacatcctggccggatccttcgagacagccatg
aggctgctgcacgatcaagtgggcgtggtctgcttcgagccactgaagcccctcttcatg
caggcgtactcacggggacgcgtgtcctacgtggggcttccgtctctgccctgtctcttc
tcacaccctttgagggacgggggcacggcagagggcaggaggcagcgagacgggcagaag
ggtggcgtcccggcagtggggctgcacctgcgtgacctcatcgctcgcctacagcagtgc
taccagatgaccaccgcggggcgctttgacgaggctgtcgacaagttcaggagcatcctg
ctgtctgtccccctgctggtgctcgacaacaaacaggagattgctgaggcccagcagttg
atcactatctgtaaagagtacattgtgggtctcaccatggaaaccgagaggaagaggctt
cctaaagagacgctggagcaacagaagagacagtgtgagatggcggcgtatttcacacac
tgtaacctgcagccggtccacatggtgttggtgttacgcacggcgctcaacctcttcttc
aaactgaaaaactttaagactgccgcagggttcgcacgccgcctgctcgagctcggaccc
aagcccgaggtggcccaacagacacgtaagatcctggcggcgtgtgagaagaacctgact
gacgcctaccagctcaactacgacccccacaaccccttcgacctgtgtgctgcctccttt
acccctctgtatcgcgggcgccctgtggagaagtgccctctctctggggcctgctactgc
cccacttacaaagggcaagtgtgcagggtcacacaggtgacagagattggtaaagatgtg
atcgggctgcgtgtgagtcctctgcagttccgctga
DBGET
integrated database retrieval system
