Tachysurus fulvidraco (yellow catfish): 113647072
Help
Entry
113647072 CDS
T08119
Symbol
smg9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113647072 (smg9)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
113647072 (smg9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
AAA_16
MeaB
RsgA_GTPase
MMR_HSR1
URGCP_GTPase
KAP_NTPase
AAA_14
Motif
Other DBs
NCBI-GeneID:
113647072
NCBI-ProteinID:
XP_027009445
LinkDB
All DBs
Position
3:26960999..26970007
Genome browser
AA seq
504 aa
AA seq
DB search
MSESGHSQPGMYGQGRRRRRRRDREPGPPGQNLSGPSRDRDYGPRERRDGSEEPSGPLLQ
KTPIILAKPPGERAKSNAAVSGSLLEKPIMLIKARDEGGKPGTTPDAALPLSGSGAAKLE
REGQRPTQPVYQIQNRGMGSAASTCAVDPVIGQTKLLPPEKMKHSIKLVDDQMNWCDSAM
EYLRDQTDMLVVGVIGLQGMGKSTILSLLSANMPEEDQRAYVFKAQTQEIKERGGNQTTG
IDFYITQERVIFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQIAAFLFTVC
HVVIVVQDWFTDINLYRFLQTAEMLKPSTPSGSHDSVGSSGPDDGSEYYPHLIFLQNKAR
REDFCPRNLKDMHMVVDKLMAHSHLKYKGMLSMLDCNIFPGLGRDYLENEVNLFLLPILE
NDGDDALTRAGSGSTPLFSLLPGYKGHPSFSSLMSKLRSQVLAMPRNQLSHTILTEKNWF
HYAARIWDGVKKSSALSEYSRLLS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtccggtcacagccagcccgggatgtacggacagggacggaggagacgtaga
cgcagggacagggagcctggaccacctggacaaaacctctccggaccgagtcgtgatcgt
gactacggccctcgggagcgaagagatggaagcgaggagccgtctggtccacttcttcag
aaaactcctatcattctggccaaaccaccaggagaaagagcgaagtcgaacgctgctgtc
agcggctctttgttggagaagccgattatgctgataaaagccagagatgaaggaggcaaa
ccggggaccacaccagatgctgctcttccactgtctggctcaggggcagcaaagctggag
agggagggtcagcgtccaacgcagcctgtgtatcagatccagaatcgaggaatgggttcg
gctgcatctacttgtgctgttgatcctgtgattggacagacgaagctcctcccccctgag
aaaatgaagcacagcattaaactagtggatgaccagatgaattggtgcgacagtgctatg
gagtacctacgagaccagactgacatgctggttgtgggagttattgggctccaggggatg
ggaaagtccaccatcctgtctctcctctcagccaatatgcctgaagaagaccaaagggca
tacgtgttcaaggcccagacgcaggagatcaaagagcgagggggaaatcaaacgactgga
atcgacttctacattacacaagagagagtgatcttcttagacacacagccaattttaagc
ccttcgatcttggaccatctcattaacaatgaccgcaagttgccgcctgagtataacctg
ccacacacgtatgtggagatgcagtcactccagatagctgcttttctcttcactgtgtgt
catgtggtaatcgtggttcaggactggttcacagacatcaacctctacaggtttctacaa
accgctgagatgctaaagccttcgactccatctggcagccacgatagtgtcggatcatca
ggaccagatgatggttcagaatactatcctcacctaattttcttacagaacaaagcaaga
agggaggatttttgtccccgaaacctgaaagatatgcacatggttgtggacaagctcatg
gcccactcccacctgaaatataaaggcatgctgtccatgttggactgtaatatattccct
ggactgggtcgggactaccttgaaaatgaagtcaatcttttccttttgccaattttggag
aatgatggagatgacgctttgacaagagcaggatctggatctactcctcttttctctctg
ctgcctggctacaaaggccacccaagcttttcgtctctgatgtccaaactgcgtagccaa
gtcctggccatgccacgcaatcaactctcccacaccatcctcactgagaaaaactggttc
cactatgctgcccgaatttgggatggggtaaagaaatcctctgcgctatccgaatacagc
cgcttactgtcctga
DBGET
integrated database retrieval system
