Tachysurus fulvidraco (yellow catfish): 113647176
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Entry
113647176 CDS
T08119
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113647176
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113647176
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113647176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
Crescentin
zf-ANAPC11
zf-RING_5
zf-C3HC4_4
zf-RING_11
zf-RING_Vps41
MAD
CALCOCO1
TSNAXIP1_N
HIP1_clath_bdg
Zn_ribbon_8
CENP-F_leu_zip
Sec3_CC
KxDL
RING_XB3-XBAT31
FANCL_C
CCDC113_CCDC96_CC
zf-RING_16
zf_RING_Vps8
zf-RING-like
BRISC_FAM175B_helical
Gp58
bZIP_1
SLX1_C
Fez1
COG3_N
RINGv
KASH_CCD
zf-Nse
AAA_13
EF-hand_like
OVT1
Rho_Binding
Motif
Other DBs
NCBI-GeneID:
113647176
NCBI-ProteinID:
XP_047666487
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All DBs
Position
2:17642914..17647581
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AA seq
451 aa
AA seq
DB search
MPIRAYCTICSDYFDHTRDVAAIHCGHTFHYVCLLQWFQSAPTKTCPQCRKQVSTRHIIN
KLFFDIAPEEEGSAADPESLQNEVDRLKVVLCEKERDWKEKQKATETLKETIEKQRADLD
RVRREIGEKEMLCTTLRKQMQFLESQQRESETAKEEAKRLRVKMKTYESLGILLQGQRAE
VEAMISDMGVGHSAVEQLSIYCISLKKEYESLKGSLRTSNETCEKLKREVFSSNNKLQKA
TLEMNRAREDMKALQNDLTNSDKEITSLKKKVEILQKTLSTPTRTNEAISRLVFESPVPV
ELKSPRLHRPLDTQDIDLNLTFDISTPEQVEKKPVVVPSKKMRLDAGATSSSHCDNTFRS
KPKDDEVSMEPMFRNSLLFRKKMFGSMLDPHSKPGAVRTGYDGLGGRTKFIQPSPLAEIR
PLLMKAKRKKVSRPTASKLPPSLSTLDGFLE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgcgcttactgcaccatctgctcagattactttgaccacaccagagatgta
gcagcgatacactgtggtcacactttccactacgtttgtcttcttcagtggttccagtca
gctcccactaagacctgtccccagtgcaggaagcaggtcagcaccagacacatcatcaac
aagcttttcttcgacatagcgccggaggaagagggatctgccgctgaccccgagagctta
cagaatgaggtggacagattgaaagtagttttatgtgaaaaagagagagactggaaggag
aaacagaaagcaaccgagacgctgaaggagacgatcgagaagcaaagagccgatctggac
cgggtcaggagagagattggagagaaagagatgctctgtaccaccctgagaaagcagatg
cagtttctggagagtcagcagagagaaagtgagacggctaaagaggaggccaagagactg
cgggtcaaaatgaaaacctacgaaagcctgggcattctgctgcagggtcagagggccgag
gtggaggccatgatctcagacatgggagtgggccattcggctgtggagcagctctccatc
tactgcatctctctcaaaaaagagtacgagagtctgaaaggcagcctgcggacctccaac
gagacgtgtgagaagctgaagagggaagtgttctcctctaataacaagttgcagaaagcc
acgctggagatgaaccgagcgagggaggacatgaaggctcttcagaacgatctcaccaac
tcggataaagagatcacaagtctaaagaagaaagtggagatcctacagaagaccctaagc
actccaacacgcaccaatgaggccatcagccgccttgtgtttgagagccccgtccctgta
gagctaaagtccccgcgcctgcaccggcccttagacacccaggacatcgacctcaacctg
accttcgacatcagcacacccgagcaggtggagaagaagcccgttgtcgttccctccaag
aagatgcgcttggacgcgggagcaacatcctccagtcactgtgataatacgttcaggagt
aagcctaaagatgatgaggtttccatggagcccatgttcaggaactctctactgttcagg
aagaagatgtttggcagcatgctcgacccacacagcaaacctggagctgtaagaacaggc
tacgatggactcggaggaagaaccaaattcatccagccctctccgctggctgagatccgg
ccgctgctcatgaaggcaaagaggaagaaagtatcgagaccgacagcgagcaaactgccc
cccagcctcagcacactggacgggttcctggaatga
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