KEGG   Tachysurus fulvidraco (yellow catfish): 113647240
Entry
113647240         CDS       T08119                                 
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
  KO
K05636  laminin, beta 1
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04510  Focal adhesion
tfd04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113647240 (lamb1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113647240 (lamb1b)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C LAMB4
Other DBs
NCBI-GeneID: 113647240
NCBI-ProteinID: XP_027009679
LinkDB
Position
19:complement(7427391..7456655)
AA seq 1772 aa
MRILQCAMIWALGLAVPAQLLPEANNMCSEGSCYPATGDLLIGRAHRLTASSTCGLHTPE
RFCIVSNLPAEKCFECDSRGLYNKVTHPNSHTIDNVVTTFTPNRLVTWWQSENGVENVAI
QLDLEAEFHFTHIIMTFKTFRPAAMVIERSSDFGQTWQVYRYFAFNCSASFPHISQGPVK
GVDDVICDSRYSNIEPSTEGEVIFRALDPKFKIPDPYSQRIKDILRITSLRVRMVKLHTL
GDNLLDGRDEVKQKYYYALYDMVVRGSCFCYGHASECAPVDDIDAGPEGMVHGLCVCNHH
TTGLNCEKCQDFYQDTPWRPAAGRNANPCKRCECNQHAYSCHFDMAVYVSSGNMSGGVCD
GCQHNTQGQHCEVCKPFYYLHPKRDIRDPRICEPCDCDSRGSLNGGVCDSVTDVMKGLIA
GQCHCKQNVEGERCDHCKQGHYGLGQDPLGCLSCSCNPLGTLPGGSPCDTDTGMCYCKRL
VTGRNCDQCQPQHWGLSTDKDGCRPCDCDFGGALNNDCSPQTGQCVCREHMFGRRCDNIK
PGYYFTALDHYTYEGEEAKFKPAVTVVARTLPVDRPLTWTGIGFANVPEGETLEFTIDNI
PQSMEYELLIRYEPQLPDVWEQVRIDVVRAGHPSPSAHCSAPYADHQMTSLPPGSRYVVL
PRPLCLEKGQKYTVKMILALFSSNDLHHEPHILIDSIVLLPVVQDLELFSGAADREEAWE
MFQKYRCLENSKSVQKLPMTNICREYIFSTSALLHQGAMECECDPLGSLSTMCEPNGGQC
PCRPNVVGRNCDRCALGTLQLGPSGCRPCECDPLGSMNAFCNSTTGQCLCLPGVYGRQCA
HCLPGHWGFPQCKPCFCNGHEDHCHPHTGQCLECRDHTTGDQCERCEKGYHGNALLGSGD
RCRPCMCPEGPGSGRQFADTCYQNPNSLQLFCVCSQGYKGPRCEECAPGYYGNPLVSGGR
CHPCRCNGNIDMHDPMSCDARTGTCLRCLHNTVGQACDRCRHGYYGDASTQKCQKCMCQP
LGTDSHRCVDGECECEQVSGQCPCLPGVEGQHCDHCAPNTWNFHSGKGCEPCQCHPTHSY
GLSCDGMSGQCSCMPGFGGRTCDECRALFWGDPEVKCHACDCDPQGISTPQCNKSTGACV
CVKGVAGQRCDSCGRGYVGTFPDCQPCHQCFREWDVTVGELTNQTQQLVDIVENLKVTGV
TAAYKGTIDKMESEAKKLTQILEDDKTQQTLRHTQELLQQSKRLVSDLDRSLNHSEVDIH
QISEEHDRVAEKLESLSLDTQKQQESINNTQQQVLRMKHSDPVGAVDSIKEYYQQSVEAE
SQVNRATTDTHNPVEQSAGLRQATQARIDAVTGEFELRQRVDSELLKTLNQELEPKDVSH
LSQQVCGGEMSENGCGECGGFGCVGEDGEPQCGGQDCEGVVTQTNNVWKKAKDLDKDIMD
SLKEVDKLQRMVSAAQGRADEGKVSAQDILLKANQSKARVEQTNQELRELIQQIRDFLSS
GTDLERIEAVSDEVLKVKMPVVAGELKNVTTELRQHVASLTGVDDVLAQSAEQAQTAERL
LQQARTISDEATHLREEVSKVTATLNETDQAQVAAEENLTAAKIDLGNAKQLITTVESET
VESEFMLSNATQRLLELKTNVDAVRQKTQDISNKAELAESKADDSTEDTEQTKRTLDLEV
KPKFQSVSGLMEDKAVGVSDARQRAEQLQQEAKDLVTDAIKKLQNLNELERSFSVNQRTL
EEKAQEVEELEKEAQALLQELSHSVTVYGTCQ
NT seq 5319 nt   +upstreamnt  +downstreamnt
atgcggattttacagtgtgccatgatttgggctttaggtttagctgtcccagcacagctt
cttcctgaggccaacaatatgtgttcagagggaagctgttaccctgccacaggcgacctg
ctgatcggcagagctcatcgccttacagcctcgtccacctgcgggctgcacactcccgaa
cgcttctgcattgtcagcaaccttccggctgagaagtgttttgagtgtgactctcgagga
ctctacaacaaggtcacacaccccaacagccacaccattgacaacgtggtcacaaccttt
actcccaaccgtctcgtaacatggtggcagtctgagaacggagtggaaaatgtggccatt
caactggacttagaagctgaatttcacttcacacatatcatcatgacctttaagacattt
cgtcctgctgccatggtgattgagcgttcatcagactttggccagacctggcaggtgtac
cgttactttgctttcaactgctctgcttcatttccacacatatcccagggaccagtgaag
ggtgttgatgatgtcatctgtgactcccgatactctaatattgagccttcaacagaggga
gaggttattttcagggcacttgatccaaaatttaagattcctgatccctacagccaacga
atcaaggatatcttgaggataactagcctgcgagtacggatggtgaagttacacactctg
ggtgataatcttctggatggccgagatgaggtaaagcagaagtactactatgctctttat
gacatggttgtccgcggcagctgtttctgttatggccacgcctccgagtgtgcaccagtg
gacgacatcgatgcagggcctgaaggcatggtacatggtctttgtgtgtgtaatcatcac
accactggtttaaactgtgagaagtgtcaagacttttatcaagatacaccatggagacca
gcagcgggccgaaacgccaatccgtgcaagcggtgtgagtgtaaccagcacgcatactcg
tgtcacttcgacatggccgtgtatgtgtcgtcggggaacatgagtggaggagtgtgtgat
ggttgtcaacacaacacacaggggcagcactgtgaggtttgcaagcccttctactacctg
catcccaaaagggacataagagaccctcgcatctgtgaaccatgtgactgtgactcacgg
ggctcactgaacggtggtgtgtgtgacagcgtgactgacgtaatgaagggcttgatcgcc
ggtcagtgtcactgtaaacagaatgtggagggagaacgctgtgatcactgcaaacaagga
cactacggacttggccaagacccgctaggctgcctctcatgcagctgtaatcctctgggt
actcttcctggaggaagtccttgtgacacagatacaggaatgtgttattgcaaacgcttg
gtcacggggagaaactgtgaccagtgtcagcctcaacattggggcctgagcacagataag
gatggctgtcggccatgtgactgtgattttggaggagctctgaacaacgattgttctcca
cagacggggcagtgtgtgtgtagagagcacatgtttggcaggcgctgtgacaacataaag
cctggttattatttcactgcacttgaccactacacttatgaaggagaggaagcaaaattc
aaaccggcagtgactgtggtggcgaggactctgcccgtagatcggcccctgacctggact
ggtattggattcgccaacgtacctgaaggagaaacacttgagtttaccattgacaacatc
ccacagtctatggaatatgagttgttaatccgctatgaacctcagttgcctgatgtgtgg
gagcaggtaaggatagatgtggtacgtgctggccatccctccccatctgcacactgttca
gctccttatgctgaccatcagatgacctcccttcctccaggctccaggtatgtggtactg
cccaggccactgtgtttggaaaagggccagaaatacacagtgaaaatgattctagcgctt
ttttcatcaaatgatcttcatcacgagccacacatactgattgactctattgtgctgttg
cctgtggtgcaagatctggagctgttctcaggggcagctgacagagaggaagcgtgggaa
atgtttcagaaataccgctgtcttgagaacagcaagagtgtccagaaattacccatgacc
aacatctgcagagaatacatcttcagcacatctgccctgctgcaccagggagctatggaa
tgtgagtgtgacccactaggctctctcagtacgatgtgtgaacctaatggtggccagtgc
ccatgcaggccgaatgtagtgggcaggaattgtgaccgctgtgccctgggcacccttcaa
ctcggaccctctggctgcaggccatgtgagtgtgacccgttgggctccatgaacgctttc
tgcaattcgaccacaggccagtgcttgtgtttacctggtgtttacggacgtcagtgtgct
cactgtctgcccggacactggggctttccccagtgcaagccctgcttctgtaatgggcat
gaagatcattgtcaccctcacacaggccagtgcttggagtgcagagaccacaccacagga
gaccagtgtgagaggtgtgagaaaggctaccatggcaacgcattactaggcagcggtgac
cgctgtcggccctgtatgtgtccagaaggcccagggagtggaagacagtttgcagatacc
tgctaccaaaaccccaactcactccagctcttctgtgtttgcagccaaggatacaaagga
ccaaggtgtgaggaatgtgcacctggttactatggaaacccattagtgtcaggtggacgg
tgccacccatgccggtgtaacggcaacattgacatgcatgacccgatgtcctgtgatgct
cgcacaggcacctgcctcagatgcctgcacaacactgtgggccaggcgtgtgatcgctgt
cgccatggctactatggagatgcgagtacacagaaatgccagaagtgtatgtgccagcct
ttgggcactgatagtcacaggtgtgtagatggtgagtgtgagtgtgaacaggtcagtggg
cagtgcccttgtcttccgggtgtagaaggtcagcactgtgaccactgtgcccccaacacc
tggaactttcacagtggaaaaggctgcgagccatgccagtgtcaccccacacactcttat
ggcctgtcctgcgatgggatgtccggtcagtgctcctgtatgccagggttcggtggcaga
acctgtgatgagtgtagagctctgttctggggtgatccagaggtcaagtgtcatgcatgt
gactgtgacccccaaggtatctctacaccacaatgtaacaagtcaacaggagcatgtgta
tgtgtgaagggtgtagccggtcagcggtgtgactcctgtggacggggctatgtgggaact
ttcccagactgccagccgtgccatcagtgcttccgtgaatgggatgtcaccgtgggtgag
ctgaccaatcagacgcagcaattggtggacattgtggaaaacctgaaagtgacaggtgtg
acagcagcctataagggcacgatagacaaaatggaaagtgaagccaagaagctcactcag
atcctagaggatgacaaaactcaacaaactcttagacacactcaagagcttctgcagcag
tccaagaggctcgtgtctgatctggaccgctccctgaaccattcggaggtcgacatacat
cagatctctgaggaacatgacagggtcgcagaaaagcttgaatcactcagtctggacact
cagaaacagcaagaaagcattaataacacacagcaacaggtgctgcgcatgaaacactca
gacccagtcggtgcagtagacagcattaaggaatattaccagcagtcagtggaggcagaa
agccaggtgaacagggccaccacagacacacacaacccagtggagcagtcagctggtcta
cggcaagccacacaggccagaatcgatgcagtgacgggagagtttgagctcagacaacgg
gtggactctgagctactgaaaactctgaaccaggagctggagccaaaggatgtttcacat
ctcagccagcaggtgtgtggtggagagatgagtgaaaatggctgtggagaatgcggaggt
ttcgggtgtgtgggtgaagacggtgagcctcagtgtggaggacaggactgtgaaggtgtg
gttactcaaacaaacaatgtgtggaaaaaagctaaagacctggacaaggacatcatggac
tcgctaaaagaagtggataagctccagaggatggtttcagctgctcaaggacgggcagac
gagggtaaagtcagtgcacaggacatcctgttgaaggccaatcagagcaaagcaagagtt
gagcagaccaatcaggagctacgagagctaattcagcagatacgagactttctttcaagt
ggaacagacctggagcggattgaagctgtgtctgatgaggttttgaaggtaaagatgccg
gtggttgctggcgagttgaagaacgtgaccacagagctccggcagcacgtcgccagtctg
accggtgtggatgatgttctggctcaaagtgctgaacaagctcaaacagctgagagactg
ctgcaacaggcacgcaccatcagtgatgaagctacacacctgagggaggaagtgagcaaa
gtgacggcaacgctaaacgagaccgaccaagctcaagttgcagcagaagagaacttgaca
gccgccaagatagacctggggaatgcaaagcaactaataaccactgtggaatcagagaca
gttgaatctgagtttatgctgagtaatgccactcagcggttgctggagctcaagacaaac
gtggatgcagtgcgacagaaaacacaggacatttctaacaaagcagaacttgctgaaagc
aaagcagacgactccactgaggacacggagcaaaccaaacggacactagatttagaggtg
aagcctaagttccagtcagttagtggcctgatggaggacaaagcggtgggtgtgtctgat
gcacgccagagagcagaacagctgcagcaggaagcaaaagacttagtcactgacgccatc
aaaaaattacagaatttaaatgagctggagcggtcattctcagtgaatcagaggactctg
gaagagaaagcacaggaggtggaagagctggagaaagaagcacaggccttgctacaggag
ctcagccacagtgtcacggtttacggcacctgtcagtaa

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