Tachysurus fulvidraco (yellow catfish): 113647240
Help
Entry
113647240 CDS
T08119
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04510
Focal adhesion
tfd04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113647240 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113647240 (lamb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
LAMB4
Motif
Other DBs
NCBI-GeneID:
113647240
NCBI-ProteinID:
XP_027009679
LinkDB
All DBs
Position
19:complement(7427391..7456655)
Genome browser
AA seq
1772 aa
AA seq
DB search
MRILQCAMIWALGLAVPAQLLPEANNMCSEGSCYPATGDLLIGRAHRLTASSTCGLHTPE
RFCIVSNLPAEKCFECDSRGLYNKVTHPNSHTIDNVVTTFTPNRLVTWWQSENGVENVAI
QLDLEAEFHFTHIIMTFKTFRPAAMVIERSSDFGQTWQVYRYFAFNCSASFPHISQGPVK
GVDDVICDSRYSNIEPSTEGEVIFRALDPKFKIPDPYSQRIKDILRITSLRVRMVKLHTL
GDNLLDGRDEVKQKYYYALYDMVVRGSCFCYGHASECAPVDDIDAGPEGMVHGLCVCNHH
TTGLNCEKCQDFYQDTPWRPAAGRNANPCKRCECNQHAYSCHFDMAVYVSSGNMSGGVCD
GCQHNTQGQHCEVCKPFYYLHPKRDIRDPRICEPCDCDSRGSLNGGVCDSVTDVMKGLIA
GQCHCKQNVEGERCDHCKQGHYGLGQDPLGCLSCSCNPLGTLPGGSPCDTDTGMCYCKRL
VTGRNCDQCQPQHWGLSTDKDGCRPCDCDFGGALNNDCSPQTGQCVCREHMFGRRCDNIK
PGYYFTALDHYTYEGEEAKFKPAVTVVARTLPVDRPLTWTGIGFANVPEGETLEFTIDNI
PQSMEYELLIRYEPQLPDVWEQVRIDVVRAGHPSPSAHCSAPYADHQMTSLPPGSRYVVL
PRPLCLEKGQKYTVKMILALFSSNDLHHEPHILIDSIVLLPVVQDLELFSGAADREEAWE
MFQKYRCLENSKSVQKLPMTNICREYIFSTSALLHQGAMECECDPLGSLSTMCEPNGGQC
PCRPNVVGRNCDRCALGTLQLGPSGCRPCECDPLGSMNAFCNSTTGQCLCLPGVYGRQCA
HCLPGHWGFPQCKPCFCNGHEDHCHPHTGQCLECRDHTTGDQCERCEKGYHGNALLGSGD
RCRPCMCPEGPGSGRQFADTCYQNPNSLQLFCVCSQGYKGPRCEECAPGYYGNPLVSGGR
CHPCRCNGNIDMHDPMSCDARTGTCLRCLHNTVGQACDRCRHGYYGDASTQKCQKCMCQP
LGTDSHRCVDGECECEQVSGQCPCLPGVEGQHCDHCAPNTWNFHSGKGCEPCQCHPTHSY
GLSCDGMSGQCSCMPGFGGRTCDECRALFWGDPEVKCHACDCDPQGISTPQCNKSTGACV
CVKGVAGQRCDSCGRGYVGTFPDCQPCHQCFREWDVTVGELTNQTQQLVDIVENLKVTGV
TAAYKGTIDKMESEAKKLTQILEDDKTQQTLRHTQELLQQSKRLVSDLDRSLNHSEVDIH
QISEEHDRVAEKLESLSLDTQKQQESINNTQQQVLRMKHSDPVGAVDSIKEYYQQSVEAE
SQVNRATTDTHNPVEQSAGLRQATQARIDAVTGEFELRQRVDSELLKTLNQELEPKDVSH
LSQQVCGGEMSENGCGECGGFGCVGEDGEPQCGGQDCEGVVTQTNNVWKKAKDLDKDIMD
SLKEVDKLQRMVSAAQGRADEGKVSAQDILLKANQSKARVEQTNQELRELIQQIRDFLSS
GTDLERIEAVSDEVLKVKMPVVAGELKNVTTELRQHVASLTGVDDVLAQSAEQAQTAERL
LQQARTISDEATHLREEVSKVTATLNETDQAQVAAEENLTAAKIDLGNAKQLITTVESET
VESEFMLSNATQRLLELKTNVDAVRQKTQDISNKAELAESKADDSTEDTEQTKRTLDLEV
KPKFQSVSGLMEDKAVGVSDARQRAEQLQQEAKDLVTDAIKKLQNLNELERSFSVNQRTL
EEKAQEVEELEKEAQALLQELSHSVTVYGTCQ
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgcggattttacagtgtgccatgatttgggctttaggtttagctgtcccagcacagctt
cttcctgaggccaacaatatgtgttcagagggaagctgttaccctgccacaggcgacctg
ctgatcggcagagctcatcgccttacagcctcgtccacctgcgggctgcacactcccgaa
cgcttctgcattgtcagcaaccttccggctgagaagtgttttgagtgtgactctcgagga
ctctacaacaaggtcacacaccccaacagccacaccattgacaacgtggtcacaaccttt
actcccaaccgtctcgtaacatggtggcagtctgagaacggagtggaaaatgtggccatt
caactggacttagaagctgaatttcacttcacacatatcatcatgacctttaagacattt
cgtcctgctgccatggtgattgagcgttcatcagactttggccagacctggcaggtgtac
cgttactttgctttcaactgctctgcttcatttccacacatatcccagggaccagtgaag
ggtgttgatgatgtcatctgtgactcccgatactctaatattgagccttcaacagaggga
gaggttattttcagggcacttgatccaaaatttaagattcctgatccctacagccaacga
atcaaggatatcttgaggataactagcctgcgagtacggatggtgaagttacacactctg
ggtgataatcttctggatggccgagatgaggtaaagcagaagtactactatgctctttat
gacatggttgtccgcggcagctgtttctgttatggccacgcctccgagtgtgcaccagtg
gacgacatcgatgcagggcctgaaggcatggtacatggtctttgtgtgtgtaatcatcac
accactggtttaaactgtgagaagtgtcaagacttttatcaagatacaccatggagacca
gcagcgggccgaaacgccaatccgtgcaagcggtgtgagtgtaaccagcacgcatactcg
tgtcacttcgacatggccgtgtatgtgtcgtcggggaacatgagtggaggagtgtgtgat
ggttgtcaacacaacacacaggggcagcactgtgaggtttgcaagcccttctactacctg
catcccaaaagggacataagagaccctcgcatctgtgaaccatgtgactgtgactcacgg
ggctcactgaacggtggtgtgtgtgacagcgtgactgacgtaatgaagggcttgatcgcc
ggtcagtgtcactgtaaacagaatgtggagggagaacgctgtgatcactgcaaacaagga
cactacggacttggccaagacccgctaggctgcctctcatgcagctgtaatcctctgggt
actcttcctggaggaagtccttgtgacacagatacaggaatgtgttattgcaaacgcttg
gtcacggggagaaactgtgaccagtgtcagcctcaacattggggcctgagcacagataag
gatggctgtcggccatgtgactgtgattttggaggagctctgaacaacgattgttctcca
cagacggggcagtgtgtgtgtagagagcacatgtttggcaggcgctgtgacaacataaag
cctggttattatttcactgcacttgaccactacacttatgaaggagaggaagcaaaattc
aaaccggcagtgactgtggtggcgaggactctgcccgtagatcggcccctgacctggact
ggtattggattcgccaacgtacctgaaggagaaacacttgagtttaccattgacaacatc
ccacagtctatggaatatgagttgttaatccgctatgaacctcagttgcctgatgtgtgg
gagcaggtaaggatagatgtggtacgtgctggccatccctccccatctgcacactgttca
gctccttatgctgaccatcagatgacctcccttcctccaggctccaggtatgtggtactg
cccaggccactgtgtttggaaaagggccagaaatacacagtgaaaatgattctagcgctt
ttttcatcaaatgatcttcatcacgagccacacatactgattgactctattgtgctgttg
cctgtggtgcaagatctggagctgttctcaggggcagctgacagagaggaagcgtgggaa
atgtttcagaaataccgctgtcttgagaacagcaagagtgtccagaaattacccatgacc
aacatctgcagagaatacatcttcagcacatctgccctgctgcaccagggagctatggaa
tgtgagtgtgacccactaggctctctcagtacgatgtgtgaacctaatggtggccagtgc
ccatgcaggccgaatgtagtgggcaggaattgtgaccgctgtgccctgggcacccttcaa
ctcggaccctctggctgcaggccatgtgagtgtgacccgttgggctccatgaacgctttc
tgcaattcgaccacaggccagtgcttgtgtttacctggtgtttacggacgtcagtgtgct
cactgtctgcccggacactggggctttccccagtgcaagccctgcttctgtaatgggcat
gaagatcattgtcaccctcacacaggccagtgcttggagtgcagagaccacaccacagga
gaccagtgtgagaggtgtgagaaaggctaccatggcaacgcattactaggcagcggtgac
cgctgtcggccctgtatgtgtccagaaggcccagggagtggaagacagtttgcagatacc
tgctaccaaaaccccaactcactccagctcttctgtgtttgcagccaaggatacaaagga
ccaaggtgtgaggaatgtgcacctggttactatggaaacccattagtgtcaggtggacgg
tgccacccatgccggtgtaacggcaacattgacatgcatgacccgatgtcctgtgatgct
cgcacaggcacctgcctcagatgcctgcacaacactgtgggccaggcgtgtgatcgctgt
cgccatggctactatggagatgcgagtacacagaaatgccagaagtgtatgtgccagcct
ttgggcactgatagtcacaggtgtgtagatggtgagtgtgagtgtgaacaggtcagtggg
cagtgcccttgtcttccgggtgtagaaggtcagcactgtgaccactgtgcccccaacacc
tggaactttcacagtggaaaaggctgcgagccatgccagtgtcaccccacacactcttat
ggcctgtcctgcgatgggatgtccggtcagtgctcctgtatgccagggttcggtggcaga
acctgtgatgagtgtagagctctgttctggggtgatccagaggtcaagtgtcatgcatgt
gactgtgacccccaaggtatctctacaccacaatgtaacaagtcaacaggagcatgtgta
tgtgtgaagggtgtagccggtcagcggtgtgactcctgtggacggggctatgtgggaact
ttcccagactgccagccgtgccatcagtgcttccgtgaatgggatgtcaccgtgggtgag
ctgaccaatcagacgcagcaattggtggacattgtggaaaacctgaaagtgacaggtgtg
acagcagcctataagggcacgatagacaaaatggaaagtgaagccaagaagctcactcag
atcctagaggatgacaaaactcaacaaactcttagacacactcaagagcttctgcagcag
tccaagaggctcgtgtctgatctggaccgctccctgaaccattcggaggtcgacatacat
cagatctctgaggaacatgacagggtcgcagaaaagcttgaatcactcagtctggacact
cagaaacagcaagaaagcattaataacacacagcaacaggtgctgcgcatgaaacactca
gacccagtcggtgcagtagacagcattaaggaatattaccagcagtcagtggaggcagaa
agccaggtgaacagggccaccacagacacacacaacccagtggagcagtcagctggtcta
cggcaagccacacaggccagaatcgatgcagtgacgggagagtttgagctcagacaacgg
gtggactctgagctactgaaaactctgaaccaggagctggagccaaaggatgtttcacat
ctcagccagcaggtgtgtggtggagagatgagtgaaaatggctgtggagaatgcggaggt
ttcgggtgtgtgggtgaagacggtgagcctcagtgtggaggacaggactgtgaaggtgtg
gttactcaaacaaacaatgtgtggaaaaaagctaaagacctggacaaggacatcatggac
tcgctaaaagaagtggataagctccagaggatggtttcagctgctcaaggacgggcagac
gagggtaaagtcagtgcacaggacatcctgttgaaggccaatcagagcaaagcaagagtt
gagcagaccaatcaggagctacgagagctaattcagcagatacgagactttctttcaagt
ggaacagacctggagcggattgaagctgtgtctgatgaggttttgaaggtaaagatgccg
gtggttgctggcgagttgaagaacgtgaccacagagctccggcagcacgtcgccagtctg
accggtgtggatgatgttctggctcaaagtgctgaacaagctcaaacagctgagagactg
ctgcaacaggcacgcaccatcagtgatgaagctacacacctgagggaggaagtgagcaaa
gtgacggcaacgctaaacgagaccgaccaagctcaagttgcagcagaagagaacttgaca
gccgccaagatagacctggggaatgcaaagcaactaataaccactgtggaatcagagaca
gttgaatctgagtttatgctgagtaatgccactcagcggttgctggagctcaagacaaac
gtggatgcagtgcgacagaaaacacaggacatttctaacaaagcagaacttgctgaaagc
aaagcagacgactccactgaggacacggagcaaaccaaacggacactagatttagaggtg
aagcctaagttccagtcagttagtggcctgatggaggacaaagcggtgggtgtgtctgat
gcacgccagagagcagaacagctgcagcaggaagcaaaagacttagtcactgacgccatc
aaaaaattacagaatttaaatgagctggagcggtcattctcagtgaatcagaggactctg
gaagagaaagcacaggaggtggaagagctggagaaagaagcacaggccttgctacaggag
ctcagccacagtgtcacggtttacggcacctgtcagtaa
DBGET
integrated database retrieval system