Tachysurus fulvidraco (yellow catfish): 113647267
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Entry
113647267 CDS
T08119
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03015
mRNA surveillance pathway
tfd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113647267
09123 Folding, sorting and degradation
03018 RNA degradation
113647267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113647267
03041 Spliceosome [BR:
tfd03041
]
113647267
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113647267
mRNA cycle factors
Stress granule specific factors
113647267
Spliceosome [BR:
tfd03041
]
Complex C
Other components
Complex C specific factors
113647267
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_Nup35
RRM_5
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
113647267
NCBI-ProteinID:
XP_047659668
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All DBs
Position
19:6147953..6152225
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AA seq
578 aa
AA seq
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MAALYVGDLHPEVTELMIFERFRPAGPIKSVHICRDRKSGYSLGYAYVNFCYQYDAERAL
EMFNFELLLEKPMRVMWSRFERTLNWTNGSNIIIKNLDKSIQSVDLFDTFSVFGKIVSCK
VVESKGYGYVQFESQEAAASAIKRLNGMLLNDQYVTIEYFKYRDERKPEARPQDQANNLF
IKNLDYTIDDECLRTVFGEFGTIISAKVTYILRQTDRQTRPQHQANNLFIKNLDYTIDDE
CLRTVFGEFGTIISAKVMTENGLSKGFGFVSFTSSQEAMTAKKALNGRMWGKKQVYVGVA
LRKEERQAQLKNEKAQKMLNLQNNVPHPSIMTAPSEAPGFETAFFEDIVPGFETARFEDI
VPGFETAPLVDTFPGFETAPLVDTFPGFETAPSEDSVPVFETVTPEDIFPDFKTAPAVER
APAEAPAALSDTTKATAAVEELSTSVANVDAVQLEDRTKDAPTSTPSGKRLTIYMLESAP
PDDRIQMAYDYMLPLVKKIHPSLASKITWMLIEGENNFEIINMIRVPELLRARVHEMDSL
LKAREAGHKPETLKMMYRHKTSRNRKKKNNKNKNKRNI
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggctgcactgtatgttggagatctgcaccctgaagtgacagaactgatgatttttgag
agattcagacctgcaggacccattaaatctgtccacatctgcagggacaggaagagcggc
tactcactcggctatgcctatgttaacttctgctatcaatacgacgctgagcgagcgctg
gaaatgttcaactttgaacttctcctggagaaacccatgcgtgtgatgtggtctcgcttt
gaacggacgctgaactggaccaacgggagcaacatcatcatcaagaacttggacaagtcc
attcagagcgttgacctgtttgacaccttctcagtgtttgggaagatcgtgtcgtgcaag
gttgtggaatcaaagggatacggctatgtccagtttgagtcacaggaggcagctgcgtcg
gccatcaagcggctcaacgggatgctgctgaacgaccaatacgtcaccattgagtatttt
aagtaccgtgatgagcgcaaacctgaggctcgccctcaagaccaggccaataacctcttc
atcaaaaacctcgattacaccatcgatgacgagtgtttgcgcacggtgttcggagagttt
gggaccatcattagtgcaaaggtaacttacatcttaagacagacagacagacagactcgc
ccccaacaccaggccaataacctcttcatcaaaaacctcgattacaccatcgatgacgag
tgtttgcgcacggtgttcggagagtttgggaccatcattagtgcaaaggtgatgacggag
aatggactgtccaagggattcggctttgtgagcttcacttcatcgcaggaagccatgact
gccaagaaagcactgaatggcaggatgtggggcaagaagcaggtgtatgtgggagtggcc
ctgcgaaaagaagaacgccaggcacagcttaaaaatgaaaaggctcagaaaatgttgaac
cttcagaacaatgtaccacacccatccatcatgacagctccttctgaggccccaggcttt
gagacagctttctttgaggacattgtcccaggctttgagacagctcgctttgaggacatt
gtcccaggctttgagacagctcccctggtagacaccttcccaggctttgagacagctccc
ctggtagacaccttcccaggctttgagacagctccttctgaggactccgtcccagtcttt
gagacagttacccctgaggacatcttcccagactttaaaactgctccagctgtagaaaga
gctccagctgaagctccagctgcactgtcagacactactaaagccacagctgcagttgag
gagttgtctacatctgtggctaatgtggatgctgtgcagctggaggaccgcacaaaagat
gcacccacatctacaccaagtgggaaacgcttgaccatctatatgctggagtctgcacca
ccagacgatcggatacagatggcctatgactacatgcttcctctggtcaagaaaatccac
ccttctctggccagtaagatcacatggatgctaatagagggagagaacaacttcgaaatc
ataaatatgattagagttcctgagcttctgcgtgccagggtacatgaaatggactcccta
ctgaaggcacgagaagctggtcacaagccggaaaccctgaagatgatgtacagacacaag
accagcagaaacaggaagaagaaaaataataagaataagaataagagaaatatctaa
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