Tachysurus fulvidraco (yellow catfish): 113647439
Help
Entry
113647439 CDS
T08119
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04514
Cell adhesion molecule (CAM) interaction
tfd04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113647439 (lrrc4bb)
04517 IgSF CAM signaling
113647439 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113647439 (lrrc4bb)
Cell adhesion molecules [BR:
tfd04515
]
Immunoglobulin superfamily
NGL family
113647439 (lrrc4bb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
LRRNT
Ig_2
VEGFR1-3_N_Ig-like
Ig_6
Motif
Other DBs
NCBI-GeneID:
113647439
NCBI-ProteinID:
XP_027009967
LinkDB
All DBs
Position
3:642222..657440
Genome browser
AA seq
727 aa
AA seq
DB search
MWAAMLTGLCSPFPLIWLVQLLLWPYFSGPQLAEATPPCPAPCSCSNQASRVICTRKGLD
EVPQSISVNTRYLNLQENSIQMIKSDTFKHLSHLEILQLSKNHIRQIEVGAFNGLPNLIT
LELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFI
SEAAFEGLVNLRFLNLGMCGLKDVPNLTPLVKLEELELSGNQLGVVRPGSFQGLVSLRKL
WLMHSRISLIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLNHNPWVCNCD
VLWLSWWLKETVPDNSTCCARCHAPPGTKGRYIGDLDQRDFTCYAPVIVEPPTDLNVTEG
MAAELKCKTGTSMTSVNWLTPNGTLMTHGAYKVRISVLHDGTLNFTNVTMQDTGPYTCMV
TNSAGNTTATAVLNVSASDPGNGYSYFTTVTVETVETGQEVHDSARQFVNETFIGYLGPT
ASSGSTGPSGSVPSSLSPHVTRAPERPFTVSITDVANLSGLEDVMKTTKIIIGCFVAITF
MAAVMLVVFYKLRKQHQLHKHHGPARTIEIINVEDEMGPAGGASGIAGGSTLHSGAGPGT
GGGPGTNLRIHDPEIITLPNIGRSDHVNHYYKSHHFNNNILGLNMGVGQTGNKTSPSSKK
QAPSTNQTATSVDSTNAGSVSPPLPIPIPMTMTFHGTLKSLSHTPSSQNEPLLLSNGSKE
SVQETQI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtgggctgccatgttaacaggcctctgtagcccctttcccctcatctggttagtccag
cttttattatggccatatttcagtggaccccagctggctgaggcaactcctccatgccct
gccccctgtagctgctccaatcaggcaagtcgggtgatttgtacgagaaagggactggat
gaagtcccacaaagtatctcagtcaacacacgatacctcaacctgcaggaaaactctata
cagatgatcaaatctgacacctttaaacacctgagtcacctggagatccttcagctttca
aagaatcacattcgtcagattgaagtcggggcatttaatggcctcccaaacctgatcaca
cttgagcttttcgataatcgtctgccattggtcccatcacaagcatttgaatatctcagt
aaactgcgtgaactctggctgcggaataatccaatagaaactctcccagcctatgctttc
catcgcgtaccttctctccgacgtctggacctcggcgaactccgaaagcttagtttcatc
tcagaagcagccttcgaaggattggtaaacctccgcttcctgaatttgggaatgtgtgga
ttgaaagatgttccaaacttgacgccacttgtgaaactagaggaacttgaactttctggg
aaccagctaggtgtagtccgtccaggatcattccaaggtcttgtttcgctacgcaagttg
tggcttatgcactcacgcatctcactaattgaacgcaatgcttttgatgatctgaagaat
ctagaggaacttaatctttcccacaattccttgcattcactgccgcatgacctgtttacc
ccactgcagcagcttgaaagggttcacctgaaccacaatccttgggtttgtaactgtgat
gttctctggctcagctggtggttgaaagagactgtaccagataactccacatgctgcgcc
cgttgccatgctccacctggcaccaaaggacgctacatcggagatctggatcagagagac
ttcacttgctatgcccctgtgatcgtggagcctccaactgacctgaatgtgactgaggga
atggcagcagagctgaaatgcaaaactggaacatccatgacctctgtgaactggttgacc
cctaatggaaccctgatgacccatggtgcttacaaagtacgaatctcagtattacatgat
ggcaccctgaacttcactaatgtcaccatgcaggatactgggccatacacttgcatggtg
actaactctgctggaaacaccacggctaccgctgtcctcaatgtgtctgcctccgaccct
ggcaatggatacagttattttacaacagtcactgtggaaactgtggaaacagggcaggaa
gttcatgactctgctcggcaatttgtcaatgagacctttatcggttatctaggcccaaca
gcatcatcaggctcaacaggaccttctggatcggtaccatcttccctgtcaccccatgtt
actcgtgctccagagcgccctttcacagtctccatcactgatgttgctaatctttcagga
cttgaggatgtaatgaagacaacaaagattataattggctgctttgtagccatcactttt
atggctgctgtgatgcttgtggttttctataaactgcggaagcagcaccagctgcacaag
catcatggtcctgcccgtaccattgagatcatcaatgttgaggatgaaatggggccagca
gggggtgccagtggtatcgcaggtggctctacccttcactccggggcaggcccaggaact
ggtggaggacctggaacaaatcttcgaatccacgaccctgaaattatcacactgcccaac
attgggcgctcagatcatgttaatcactactacaaatcacaccactttaacaacaacatc
ctgggacttaacatgggagtgggccaaactggcaacaagacaagcccctcatctaaaaaa
caggccccatccaccaatcagacagccacatctgtcgactcaactaatgctggatctgtc
tctccaccattaccgattccaatcccaatgacgatgactttccatggaacactgaagagc
ttaagccacacccccagctctcaaaatgagcctctgctgttgtccaatgggtccaaggag
agtgttcaggagacacagatataa
DBGET
integrated database retrieval system
