Tachysurus fulvidraco (yellow catfish): 113647552
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Entry
113647552 CDS
T08119
Symbol
lars1b
Name
(RefSeq) leucine--tRNA ligase, cytoplasmic
KO
K01869
leucyl-tRNA synthetase [EC:
6.1.1.4
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113647552 (lars1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tfd01007
]
113647552 (lars1b)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfd03016
]
113647552 (lars1b)
03029 Mitochondrial biogenesis [BR:
tfd03029
]
113647552 (lars1b)
Enzymes [BR:
tfd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.4 leucine---tRNA ligase
113647552 (lars1b)
Amino acid related enzymes [BR:
tfd01007
]
Aminoacyl-tRNA synthetase
Class I (U)
113647552 (lars1b)
Transfer RNA biogenesis [BR:
tfd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
113647552 (lars1b)
Prokaryotic type
113647552 (lars1b)
Mitochondrial biogenesis [BR:
tfd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
113647552 (lars1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ULD_3
RBD_LARS1
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
BEX
Motif
Other DBs
NCBI-GeneID:
113647552
NCBI-ProteinID:
XP_027010122
LinkDB
All DBs
Position
21:complement(643801..666075)
Genome browser
AA seq
1176 aa
AA seq
DB search
MTERKGTAKLDFLRKIEIEIQKKWAEEKVFESDAPAAEAETKNNYLITFPYPYMNGKLHL
GHTFCLSKCEFAVGFQRLKGRHCLFPFGLHCTGMPIKACADKLKRELELYGNPPQFPDEE
EEEEEEKPKPADEIIIKDKAKGKKSKAAAKSGSSKFQWDIMKSLGLKDEEIVKFSEAEHW
LEYFPPLAVKDLKTMGVKVDWRRSFITTDVNPFYDSFVRWQFVTLRERKKIKFGKRYTIY
SPKDGQPCMDHDRQTGEGVGPQEYTLIKMKVVEPYPAKLSTLKGKKVFLVAATMRPETMF
GQTNCWVRPDMKYVVFETVSGDVFISTQRSARNMSYQGFTKDNGVVPVVMQLLGQDILGC
ALNAPLTSYKTIYALPMLTIKEDKGTGVVTSVPSDSPDDIAALRDIKKKAALREKYGIKD
HMVLPFEPVPIIEIPGFGNLSAPLVCDELKIQSQNDREKLAEAKERVYLKGFYEGIMLVD
GFKGQKVQDVKKPIQKMMMDKGEALIYMEPEKQVMSRSADECVVALCDQWYLDYGDKEWK
QQAVTALESLETFCDETRKNFEATLAWLQEHACSRTYGLGTRLPWDEHWLIESLSDSTIY
MAYYTVAHLLQGGVLNGQGPSPLGIGPEQMTREVWDFIFFKSAPFPKTNIPKEHLQRLRR
EFEYWYPVDARVSGKDLVPNHLSYYLYNHVAMWPDDKGKWPRAVRANGHLLLNSEKMSKS
TGNFLTLSQAIEKFSADGMRLALADAGDTVEDANFVEAMADAGILRLYTWVEWVKEIISN
QNNLRSGPADTFNDRVFVSEMNSGIIRTEQHYERMMYKEALKSGFFEFQAAKDKYRELAI
EGMHRDLVFDFIENQTLLLAPICPHLCEYTWNLLGKSESLMKARWPAAGPVDEVLIRSSQ
YLMETAHDLRLRLKAYMQPAKNKKGDNKPPGKPSHCTVYVAKSYPPWQHSALSLLAKHYK
NNNGALPDNKVISSELSAMPELKKYMKRVMPFVAMIKDNLEKKGPRVLELELEFDERAVL
LENIVYLTNSLELDQIDVLFASEGDDKVKEDCCPGKPFSVFRSEPGVSVSLLNPQPFNGL
FSSRIDVRQGDTKDSIVRRLSKINRGIKDLTKVKLMRFEDPLLGPRRVPVLGKEEQGKLA
VSDKCVFHINLQENKVCLSDNGLTVDVGDTLVYVME
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacgaaagggaacagcgaagctcgacttcttgaggaagatcgagatcgagatc
cagaaaaaatgggcagaggagaaagttttcgagagcgacgccccggcggcggaagctgaa
actaagaacaattacttgattacctttccgtatccgtacatgaacgggaaactgcatctt
ggtcacaccttctgtctgtcgaagtgtgagtttgcagtgggctttcagcgcttaaaagga
cgccactgtctcttccccttcggattgcactgtactgggatgcccattaaagcctgtgcg
gataaactgaagcgagaattggagctctacggaaatccgccccagtttcccgacgaggaa
gaggaggaagaggaagagaagccgaagcccgcggatgagatcatcattaaagacaaggcg
aaggggaagaagagcaaagcagctgccaaatcaggatcctccaagttccagtgggacatc
atgaagtctctgggcttgaaggacgaggagattgtgaagttttcagaagctgagcactgg
ctggaatattttcctccgctggcggtgaaggatctgaagacgatgggtgtgaaggtggac
tggcgtcgctccttcatcaccaccgacgtcaaccctttctacgactcctttgtgcgctgg
cagtttgtcaccctgcgagagaggaagaagatcaagtttgggaagagatacacgatttac
tctccgaaggacggacagccgtgtatggaccacgacagacagacgggagaaggagtcggc
cctcaggagtacactctcattaagatgaaggtggtcgaaccttatccagctaaactgagc
actctgaaagggaagaaggtcttcctggtggcagctacgatgaggccggagacgatgttc
ggtcagacgaactgctgggtcagacctgatatgaagtacgttgtgtttgagacggtgagc
ggagacgtgttcatcagcacacagagatcagccaggaacatgtcctaccagggcttcacg
aaggacaacggcgtggtccctgtagtcatgcagctgctcggacaggacattctcggctgt
gccctgaacgctcctctcacttcctataagaccatctacgccctgccgatgctcaccatc
aaggaggacaaaggaacaggagtcgtgaccagcgtgccgtcagactctcctgatgacatc
gctgcactgagagacatcaaaaagaaagcggctctgagagagaagtacgggattaaagat
cacatggtccttccttttgaaccggttcccatcatcgagatcccgggattcggaaacctt
tcggctcctctggtgtgtgacgagctgaagatccaaagccagaacgatcgagagaagctg
gcggaggccaaagagagagtctacctgaaagggttttatgaagggatcatgttggtcgat
ggttttaagggacagaaagttcaggatgtgaagaagccgatacagaagatgatgatggat
aagggtgaagctctgatttacatggaacctgaaaagcaagtgatgtctcgctcggctgac
gagtgcgtggtggcgctgtgtgatcagtggtatctggattacggtgacaaggagtggaag
caacaagctgtaactgctctggagtctctggagacattttgtgatgaaaccaggaagaac
tttgaggcgactcttgcttggctgcaggaacacgcctgctccagaacatatggtttaggt
acgcgtttgccgtgggacgaacactggctcatcgagtctctctcagactccactatctac
atggcttactacactgtagctcacctactgcaggggggagttctcaatggacagggaccc
tcacctctgggaatcggaccagaacagatgaccagagaggtgtgggatttcatcttcttc
aaatcagctccgtttcccaagacgaacatccctaaggagcatctgcagagactgaggaga
gagtttgagtactggtacccagtggatgcccgtgtctctggaaaagacctggtgccaaac
catctgtcttactacctgtacaaccacgtggccatgtggcccgacgataagggaaagtgg
cccagagcggttcgtgccaatggacaccttttattaaattctgagaagatgtctaaatct
acgggcaactttctcaccctgagccaagcgatcgagaagttctcagcagacggtatgcgc
ttggctctagctgacgccggagacacggtggaagatgctaacttcgtagaggcgatggct
gacgccggcattctgcgtctctacacctgggtggaatgggtcaaggagatcatctccaac
cagaacaatctgagatccgggcctgcggacacctttaacgacagagtgttcgtcagtgaa
atgaactcggggattattagaactgagcagcattatgagaggatgatgtacaaggaggca
ctaaagtctggattctttgagttccaggcagctaaggataagtacagggagttggccatc
gagggaatgcacagagatctggtgtttgactttattgagaatcagaccctgctactggct
cctatctgccctcacctgtgtgaatacacttggaacctgctcggaaagagtgaatcatta
atgaaggcacgctggccagcggcaggtccagtggacgaggttctaatccggtcctcacag
tacctgatggagacggcccatgacctgcgtctccgccttaaagcctacatgcagcctgcc
aagaacaagaagggagacaacaaaccaccgggcaaaccttctcactgcacggtgtatgtg
gcaaagagttaccctccctggcagcacagcgctctgtctctcctggccaaacactacaag
aacaacaacggagctcttcctgacaataaggtgatctcgtcggagctgagcgccatgccc
gagctgaagaagtacatgaagcgggtcatgccttttgtagccatgatcaaggacaacttg
gagaagaaagggccaagggtgctggagctggagctggagtttgatgagcgagcagtcctg
ctggagaacattgtttatctcaccaactctctggagctggatcagatcgatgtcctgttt
gcctccgaaggggacgataaagtgaaggaggactgttgtccggggaaaccgttcagcgtg
ttcagatccgagcctggagtgtcggtcagtctgctgaaccctcagccattcaacggtctt
ttctcctctcggatcgatgtccgccagggtgacaccaaggacagcatcgttcgccgactg
tccaaaatcaaccgaggcatcaaagacttgactaaagtgaagctgatgcggtttgaagat
ccgctgctcggccctcgtagagttcctgttctgggtaaagaagagcagggcaaactggcc
gtctcagacaagtgtgtgttccacatcaacctgcaggagaacaaggtgtgtctgagcgac
aacggcctcacggtggacgtcggagacactctggtctacgtgatggagtga
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