Tachysurus fulvidraco (yellow catfish): 113647557
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Entry
113647557 CDS
T08119
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04080
Neuroactive ligand-receptor interaction
tfd04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113647557
04082 Neuroactive ligand signaling
113647557
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113647557
Ion channels [BR:
tfd04040
]
Ligand-gated channels
GABA-A
113647557
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Glyco_hydro_100
Motif
Other DBs
NCBI-GeneID:
113647557
NCBI-ProteinID:
XP_027010131
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Position
21:complement(896106..1010096)
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AA seq
477 aa
AA seq
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MSGAPNKLVVLVSCIWIFLMLLEPSLQNGAVAGHREPLPDDSKDNITIFTRILDRLLDGY
DNRLRPGLGESVTEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLPL
NNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDF
PMDAHACPLKFGSYAYTNNEVVYIWTADDDRSVSVAPDGSRLNQYDLLGHVIGKETIKSS
TGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWDGQKEIQEM
RRRESASFSKKTNNTFNIVGTTYPMSVGKEPGLTTIAKSASSTASASTPSQPVREVRLSR
MDGEYICEGVKKSYNRVSKVDKISRIIFPVLFFIFNLAYWATYVNRKPTIRRSNPHN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgctcctaacaagcttgtcgttcttgtgtcgtgcatatggatattcctaatg
ctcttggaacccagccttcagaatggggctgtagcagggcacagagagcctcttcctgat
gacagtaaagacaacatcactatttttactcggattctggatcgcttgctggatggatat
gacaacaggctgcgccctggtctcggagagagtgtgactgaagttcgaaccaacatctac
gtcaccagttttggaccagtatctgatacagacatggaatacacaatcgatgtattcttt
cgacagagctggagagatgagaggctgaagtttgatggacccatgcaggttcttccactc
aacaaccttctggccagtaagatctggactccagatacattcttccacaacggtaaaaag
tcggttgctcacaacatgaccactcctaataaactcctgcgtctggtggacaacgggact
ctgctgtacactatgagattaactattcatgctgagtgccccatgcatctggaagatttt
cccatggatgcccacgcctgcccgctcaagttcggaagctatgcttacaccaacaacgag
gtggtctacatctggactgcagatgatgacaggtctgtgtctgtggccccagatggctcc
cgtctcaaccagtatgacctgctgggacacgtcatcggcaaagagaccatcaagtccagc
acaggagaatatgtggtgatgacaacttattttcatctgaaaaggaaaatcggctacttt
gtcattcagacatatttgccctgcatcatgacagtcatcctttcccaggtctccttctgg
ctcaaccgcgagtctgtgccagcacgtaccgtcttcggagtcaccactgttctgaccatg
accacgctaagcatcagtgccagaaactctctacccaaagtggcctatgctacagcaatg
gactggttcatggccgtgtgttacgcgttcgtcttctccgccctcattgagttcgccacc
gtcaactatttcaccaagcgcagctgggcctgggatggacagaaggagatccaggagatg
aggagacgcgagtctgcgtcattctccaaaaagaccaacaacacgtttaacatcgtgggc
accacatatccgatgagtgtgggaaaagaacctggactgaccaccattgctaagagcgct
tccagcaccgcctcagcctctaccccgtctcagccggtccgagaggtgcgtctgtccagg
atggacggggagtacatctgcgaaggcgtcaagaagtcctacaaccgagttagcaaagtg
gacaagatctcacgtattatatttcccgtgctcttcttcatcttcaacctggcctactgg
gccacttacgtcaacagaaagccgaccatcaggaggtccaacccccataactga
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