Tachysurus fulvidraco (yellow catfish): 113647564
Help
Entry
113647564 CDS
T08119
Symbol
brcc3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03440
Homologous recombination
tfd04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113647564 (brcc3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfd01002
]
113647564 (brcc3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113647564 (brcc3)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113647564 (brcc3)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113647564 (brcc3)
Peptidases and inhibitors [BR:
tfd01002
]
Metallo peptidases
Family M67
113647564 (brcc3)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
113647564 (brcc3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
113647564 (brcc3)
BRISC complex
113647564 (brcc3)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
113647564 (brcc3)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
113647564 (brcc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
TEDC1
REP_ORF2-G2P
DUF6262
DUF7385
Motif
Other DBs
NCBI-GeneID:
113647564
NCBI-ProteinID:
XP_027010141
LinkDB
All DBs
Position
21:797436..802822
Genome browser
AA seq
260 aa
AA seq
DB search
MAVNAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRV
EISPEQLSAASTEAERLAEMTGRPVRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVVPHEAIGKVCLESAVEL
PRILCQEEQDTYRRIHSLTHLDPITKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNK
KSIVELQKEKERLTQELASL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcggtaaacgcggtgcatttagagtcggacgcttttctggtttgtatgaatcacgct
ttgagtacagagaaagaagaagttatggggctctgcattggggaggtcgacaccaatcgt
attgtccacattcactcggttattattctgcggcggtctgacaagaggaaggaccgagtg
gagatttcacctgagcagctttctgcagcctccactgaagctgagaggttggctgagatg
acggggcgtcctgtaagggtggtgggatggtaccactctcatcctcacatcactgtgtgg
ccgtcacacgtcgatgtgaggacgcaggccatgtaccagatgatggatcagggttttgtg
ggtctcatcttttcttgctttatagaagataagaacacgaagacgggtcgagttctgtac
acgtgttttcagtcagtacaagcccagaaaggctccgagtacgagaggatcgagattccc
atccatgtggttcctcacgaggccatcggaaaagtgtgtctggaatctgcggtggaactt
cccagaattctctgtcaggaggaacaggacacgtacaggaggattcacagcttaactcat
ttggatccaatcacaaagatacacaatggatcagtattcactaaaaacctctgcagtcag
atgtcagcagttagtggaccgctgttgcagtggctggaggatcgactggagcagaacaaa
aagagcatcgtggagctgcagaaagagaaagagagactgacgcaggagctggcctcgtta
tga
DBGET
integrated database retrieval system
