Tachysurus fulvidraco (yellow catfish): 113647706
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Entry
113647706 CDS
T08119
Symbol
rapgef2b
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04010
MAPK signaling pathway
tfd04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113647706 (rapgef2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
113647706 (rapgef2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
RA
PDZ_6
cNMP_binding
RA_2
PDZ_2
ABhydrolase-like_N
Motif
Other DBs
NCBI-GeneID:
113647706
NCBI-ProteinID:
XP_027010360
LinkDB
All DBs
Position
17:4127205..4234386
Genome browser
AA seq
1605 aa
AA seq
DB search
MASYVDNSFRQAVMLNPAERTQQDLEIVYSYLHGMEALSNLREHQLRMMCETVRYERHEA
NEVLYYPDDMGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVEPYQAGKPPISRGYHTECVKA
QLPADFSRLHLADGIHPQVTHVSSSLSGCSITSDSGSSSLSDIYQATESEPGDMDLSGLP
ETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPEGRTEILCMGNSF
GVSPTMEKEFMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTTERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGRKLLEW
FHDPSLRDKVTRVVLLWVNNHFNDFEGDPEMTHFLEEFENNLEREKMFGHLRLLNIACAA
KAKLRVVTLTKPSREAPLAFGLLGGSEKGFRIFIENVEPGSKAAEAGLKRGDQVLEVNGQ
NFENVQLSKANEILRNNTHLSITVKTNLLVFKELLARPEHDQEPDHDEELDRKNGAPHIP
KIGDIKKASRYSIPDLAVDVEQVMGLEKASKKAKANTVGGRNKLKKIFDKTLTSILPPKP
YNDVGVGQSQDDSIVGMKQSKQIPPALPVSGNLSSSNPDLLQSHHRILDFNNQPEPVPNN
MSDQVLRVFKADQQSRYIMISKDTTAKEVVAQAIREFALTAAAEAYSLCEVSVTPECVIK
QRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQELLRESQISLLQLSTVEVATQ
LSMRAFELFCAIEPTEYIDDLFKLRSRSSGPSSLKLFEESINRETFWVATEVLREPNQLK
RMKIIKHFIKIALHCRECKNFNSMFAIISGLNLAPVSRMRGTWEKLPSKYEKLFSDLQDL
FDPSRNMAKYRNVLNSQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKE
IRHVGRMAAVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLN
AKKLYEDAQMARKVKQYLSNLTLETNEESLQTLSVQCEPSISTLPKSSGDRKRPDTSPVV
ARAALHPRQQLQKSNQALQVPTVALYPSRKKVPVKDLPPFGTNSPQSLKKILSLSEEAAE
RHRKQTEDAVSSTSSPPTSPRSSPKKGLGRASDNLSDSGHSEISSRSSLVSTSSLDMGQD
ERRLRYGHGVSDGHAAGHGGHRLERRATADPDQYSLGSYSSVQDWRGMYANTAMPSSPSS
EELSQEQGDRVSLDAADSGRGSWTSCSSGSHDSIQAMQQGRSWEALAEGAGLWAGRGSWA
STSSCSSTSAACWGDESEGDTGTIKRRGGKDVGTDPDTCSITSTGSEESKQQSRRPSPIT
AGTTKSSMIRKDGRYRDPPPTPPGYTALSISEVTEGSTHSTRKPPDYTTALQRSRLITHS
PKPGTEREGEDEEEEVEVEEEGECLSPKLRDQRRRGPHTAVPPRP
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtggacaacagctttaggcaggcggtgatgctgaacccggccgagagg
acgcaacaggatttggagattgtgtactcatatctacatggtatggaggctctgtccaat
ctacgagaacatcagctaaggatgatgtgtgaaactgtccgttatgaaaggcatgaagca
aatgaagtgctttactatccggatgacatgggcagctgctggtacattcttctctctgga
tccgtgttcatcaaagagtccatgttccttcctagatccagtttcgggaagcgttctgct
ggaagtttacgtcgcggatgtgagtgcatcgttttggagccgtccgaaatgatcgtggtg
gactatatggatgagaatgaggagtattttcagcgccaggcttcacatcgacagtctcgg
aggagattccgcaaaatcaaccagaagggcgaaaggcagaccatcatcgacacggtggag
ccgtaccaagcgggcaagccgcccataagccgcgggtaccacacggaatgcgttaaagct
cagctcccagcagacttcagcaggctacacttggctgacgggatccacccccaggtgacc
cacgtctcctccagtctctcaggatgtagcatcaccagtgactccgggagcagcagcctg
tccgacatctaccaggccacggagagcgagccaggcgacatggacctgagtggcctgccc
gagaccgccgtcgactccgaagaggatgacgacgaggaagacatcgaacgtgcctccgat
ccgctcatgagccgagacatcgtccgtgactgcctggagaaagaccccatggaccgcacg
gatgatgacatcgagcaactgctggagttcatgcaccagcttccagcctttgctaacatg
accatgtcggtgaggagggagctttgtgctgtcatggtgttcgccgtcgtcgagcgagct
ggaaccatcgtccttaacgacggcgaggagctggactcgtggtctgtgattctgaacggc
tcggtggaggtgacctaccccgagggtcgcaccgagattctctgcatgggcaacagcttc
ggcgtctcacccactatggagaaagagttcatgaagggagtgatgaagaccaaggtggac
gactgtcagtttgtgtgtatagcacagcaggactattgctgcatcctgaaccaggtggag
aagaacatgcagaaggtggaggaggaaggagaaatcgtcatggttaaagaacaccgtgag
ctcgatcgcaccggcaccagaaaaggacacatcgtcatcaagggaacaacggagcgtctg
accatgcacctggtggaggagcactcggtggtggatcccacctacatcgaggacttcctg
ctcacataccgcaccttcctgtccagccccatggtggtgggcaggaaactgcttgagtgg
ttccatgaccccagcctcagggacaaggttacacgagtggtcctgctgtgggtgaacaat
cacttcaatgactttgaaggcgaccctgaaatgacgcactttctcgaagagtttgagaac
aatctagagagggagaaaatgtttggacacttaagactgttaaacatagcgtgtgcggcc
aaagccaagctgcgggtggtgactctgactaagccgtcacgagaggctcctctggccttc
ggcctgctcggtggctcggagaaaggctttcgcatctttattgagaatgtggagccgggc
agcaaagctgcagaagcaggtctcaagcgtggagatcaggttctggaagtaaacgggcag
aactttgagaacgtccagctgtccaaagcaaacgagatcctgcgcaacaatacgcatctg
tctattactgtgaaaacaaatctcttagtgtttaaggagcttttggctcgacctgagcat
gaccaagaacctgatcatgacgaagagctggacaggaaaaacggggctccacacattccc
aagatcggggatattaagaaagcgagccgttactctatcccagacctggctgtagatgta
gagcaggtgatgggtctggagaaagcaagcaagaaagccaaggccaacacggtgggtggg
aggaacaagctcaagaagatcttcgacaagacgttgaccagtattctaccgcccaagcca
tacaatgatgtgggtgtaggccagtcccaggacgacagcatcgtcggaatgaagcagtcg
aaacagatacctcctgctcttccagtcagtggaaacttatcatccagtaaccctgacttg
ctgcagtctcatcatcgtatactcgacttcaacaaccagccagagccggtccctaacaac
atgtcggaccaggtgctgcgtgtcttcaaggccgatcagcagagccgttacatcatgatc
agcaaggacactacggccaaggaagtcgtggctcaggccatcagggagtttgctctgacc
gccgccgccgaagcgtattcactgtgcgaagtgtcagtgacacccgagtgcgtcatcaag
cagcggcggcttcctgaacagctctccaaactggccgacaggatccagctcagtggcagg
tactacctaaaaagcaacatggagacggagacattgtgctcggatgaggacgcgcaagag
cttttgagggagagtcaaatcagcctgctgcagttaagcacggtggaagtggccacgcag
ctctccatgcgtgccttcgagctcttctgtgccatcgaacccaccgagtacatcgatgac
ctcttcaagctgcggtcacgctcctccggaccttccagtctcaagctttttgaagagtcc
ataaaccgcgagaccttctgggtggccactgaggtgctgagagaacccaaccagctgaag
cgcatgaagatcatcaagcattttatcaagatcgctctgcactgccgcgagtgcaaaaac
ttcaactctatgtttgccatcatcagtggtcttaatctggcccccgtatccagaatgcga
ggaacttgggagaaacttccaagcaagtacgagaagttgtttagtgatctgcaggacctg
tttgacccgtccagaaacatggccaaataccgaaatgttctcaacagccagaacctacag
cccccaatcatcccactcttcccagttatcaaaaaagatctcacctttctccatgagggc
aatgattcaaaagtggacggactggtgaattttgagaagctacgtatgatcgctaaagag
atcagacatgtgggtcggatggcggccgtcaacatggaccctgccctcatgttccgcacc
aggaagaagaagtggaggagtttggggtcactgagccagggcagcgccaacgcagccgtt
ctggatgtgacccagacgggcgggcataaaaagcgtgtcaggcggagttccttcctcaac
gccaagaagctgtacgaggacgcacaaatggcacgcaaggtcaagcagtacctgtctaac
ctcacactggagaccaacgaggagagcctgcagactctgtctgtacagtgcgaaccctcc
ataagtacactgcctaagagctcaggggacaggaagaggccggacacctcccctgtggta
gcaagagccgctctgcacccacgccagcagcttcagaaatccaaccaggctttgcaggtt
cccaccgtcgccctctacccgtcccgcaagaaggttcctgtcaaagatctgccaccgttt
ggcacaaattctccgcagtctttaaagaagattctgtctctgtcagaggaggctgctgag
agacacaggaagcagacggaagatgccgtgtccagcacttcgtctcctcctacgtctcct
cgcagctccccaaagaaaggattaggaagagcgagtgataacctgtcagactcgggccac
agtgagatctcgtctcgatccagcctggtcagcacgtcttcactggacatgggccaggac
gagcgtcgtcttcgatacgggcacggcgtcagcgacgggcacgctgccgggcacggaggc
caccgactggaacgtagggccacagctgatccggaccagtacagtctcggctcgtactca
tcggtgcaggactggcgcggcatgtacgccaacacggccatgccgtcctccccgagttca
gaggagttaagtcaggagcagggcgatcgcgtctccttggatgctgcagactcaggacga
ggcagctggacatcctgctctagcggctcacacgacagcatccaggccatgcagcagggc
aggagctgggaagctctggctgagggggcaggtctgtgggccggacggggcagctgggcg
tcaacttcgtcatgctcgtccacatcggcagcgtgctggggagatgagtccgagggggac
acggggactatcaagcggagggggggtaaagacgtgggcaccgatcctgacacctgcagc
atcacttccacaggatcagaggagtctaaacagcagagtcgccggccgtctcccatcacc
gccggcacaaccaagagcagcatgatacgcaaagatggacgatatcgtgatccacctccc
actcctcccggctacacggctctgtctatctccgaggtgacggaggggtcgacgcactca
accaggaagcctccggactacaccacagcgctccagcgctcccgcctcattacgcactcg
cctaaaccggggacggagcgtgagggagaggatgaggaagaggaggtagaggtagaggag
gagggtgagtgcttatctcccaaactcagagatcagaggaggagaggtccacacacagca
gtgccccccaggccatga
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