Tachysurus fulvidraco (yellow catfish): 113647826 Help Entry 113647826         CDS       T08119                                  Symbol prpf19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism tfd  Tachysurus fulvidraco (yellow catfish) Pathway tfd03040   Spliceosome tfd04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:tfd00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     113647826 (prpf19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     113647826 (prpf19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:tfd03041]     113647826 (prpf19)    04121 Ubiquitin system [BR:tfd04121]     113647826 (prpf19)    03400 DNA repair and recombination proteins [BR:tfd03400]     113647826 (prpf19) Enzymes [BR:tfd01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      113647826 (prpf19) Spliceosome [BR:tfd03041]  Complex B   Other components    Prp19 complex     113647826 (prpf19)  Complex C    Prp19-CDC5 complex     113647826 (prpf19) Ubiquitin system [BR:tfd04121]  Ubiquitin ligases (E3)   U-box type E3    113647826 (prpf19) DNA repair and recombination proteins [BR:tfd03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     113647826 (prpf19) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Prp19 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_IFT122_1st PEP5_VPS11_N Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_Nup120_160 WD40_RFWD3 U-box Beta-prop_WDR35_TULP_N PROPPIN Beta-prop_DCAF12 Cytochrom_D1 zf-Nse ATG16 Cep57_MT_bd Motif Other DBs NCBI-GeneID:  113647826 NCBI-ProteinID:  XP_027010584 LinkDB All DBs Position 17:complement(7438090..7444821) Genome browser AA seq 505 aa AA seqDB search MSLVCAISNEVPEHPCVSPVSNQVFERRLIEKYIAENGADPINGQPLSEEQLVDIKVAHP IRPKAPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLVAPQVAPASQPAAVGAGGEPMEVSEQVGMTPEIIQKLQDK ATVLTTERKKRGKTVPEELVRAEDLSKYRQVSSHVGLHSASIPGILALDLCPTDTNKVLT GGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPSQSLVFSASPDSTIRVWSLAAGNCV QVVRAHEAGVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFH PDGLIFGTGTADSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLW DLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWTEVLNFTDHSGLVT GVAFGEHAQFLSSTGMDRSLKFYSL NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt atgtctttggtttgtgcaatctcaaacgaggtcccggagcacccttgtgtctctccggtc tccaatcaggtatttgaacgccgcctcatagagaaatacattgctgagaatggagctgat cccattaacggacaacctctgtctgaggagcagctggttgacatcaaggtcgctcaccct attcgaccaaaggcaccatctgctaccagcatccccgccattctgaaatcccttcaagac gagtgggatgcagtgatgctgcacagtttcacactgcgccagcagttgcagacaacacgg caggagctgtcacacgcactctaccaacacgatgccgcctgcagggttattgctcgtctc actaaagaggtcactgctgccagagaggctttggccacactcaaacctcaagccggattg gttgctccccaggttgctcctgcctcccagcctgcagcagtgggtgcgggtggtgagccc atggaggtcagtgaacaggtgggaatgactccagagatcatccagaagctgcaagacaag gccactgtcctgaccaccgaaagaaagaagaggggaaagacggtgccagaggagctggtc agagccgaagatctcagcaagtatcgccaagtgtcctcccatgttggtctgcacagtgcc agcatccctggaatccttgctctggatttgtgtcccacagacaccaacaaagtgctcaca ggtggcgcggataagaacgtggtggtgttcgatcgcagagaggagcagattgtggccact ctcaaaggccacaccaaaaaagtctcctctgtcatctaccacccatctcagtcactggtg ttttcggcatctccagatagcaccatccgtgtgtggtctcttgcagctggaaactgtgtg caggtggtcagagctcatgaggcaggagttactggcctctccctgcatgctactggggat tacctgctgagttcctctgaggatcagtactgggccttctctgatatccaaactggtcgt gttctcaccaaagtcacagatgagacagcaggatgtgcgctgacctgtgctcagttccac cctgacggcctgattttcggtaccggtacggcagactcgcagattaagatttgggatctg aaggagcgcactaatgtggccaacttccctggtcactctggtccggtcaccgccatcgct ttctctgagaatggatactaccttgctactggtgctcaggatagctctctgaagctgtgg gatctgaggaagttgaagaactttaagacaattactttggataataactatgaggtgaag tctctggtgtttgatcagagtggaacgtacctggctgttggagggtctgatattcgagtt tacatttgcaaacagtggactgaggttctcaacttcactgatcactcaggtttggtgact ggtgtggcttttggtgagcatgctcagttcctgtcatctactggtatggacagaagcctc aagttctacagcctgtag

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