Tachysurus fulvidraco (yellow catfish): 113647841
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Entry
113647841 CDS
T08119
Symbol
srsf6b
Name
(RefSeq) serine and arginine rich splicing factor 6b isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03040
Spliceosome
tfd05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113647841 (srsf6b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113647841 (srsf6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113647841 (srsf6b)
Spliceosome [BR:
tfd03041
]
Common components
Common spliceosomal components
SR proteins
113647841 (srsf6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
113647841
NCBI-ProteinID:
XP_027010608
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All DBs
Position
2:3642317..3646656
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AA seq
356 aa
AA seq
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MPRVYVGRLSYHVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDTRDADDAVYELNGKEL
CGERVVVEHARGPRRDRDGYGGGYGGSGRSGSSGYSSRSRSGRDKYGPPVRTEYRLIVEN
LSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTDINGRKI
RLVEDKPKRRRSYSGSRSRSRSRRRSRSRSRRSRSSRSRSRSRSRSRSRSKRRSHSRSKR
KSRSKSPAKSRSKKSRSRSHSRKSHSRSASRKSRSKSHSKPRSERGSRSRSKEKSVSKKS
RSRSASPMENGDKKSVSRSPSPQEDRHRSKSPLKRSPSRSPSRSKSRSRSRSASQD
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtgtttacgtaggcaggctgagttatcatgtccgcgaaaaggacatccagagg
tttttcagcggttatgggaagctgttagagattgatctgaagaacgggtatgggtttgtg
gagtttgaggacacacgtgacgccgatgatgctgtgtacgaactgaatggcaaggagctg
tgtggtgaacgtgtggttgtggaacacgccagggggccacgtcgggaccgcgacggatat
ggtgggggttatgggggttctgggcgcagtggtagtagtggttacagcagccgaagccgc
tccggcagagacaaatacggacctcctgtccgcactgagtatcggctcatcgtagaaaac
ctgtccagtcgatgcagctggcaggacctcaaggacttcatgcgacaggccggtgaggtg
acctatgctgatgcccacaaggaacggacaaatgaaggtgtgatcgagttccgcagctat
tctgatatgaagagggcccttgataagctggacggcactgacatcaatggaaggaaaatt
cgcctggtggaggataaacccaaacggcgccgatcgtactctggcagcaggtctaggtcc
cgcagccgtcgccgctctcgcagcagaagccgtaggagcaggagctcacgaagccgctca
aggtctcgctctcgatcccgctcccgcagcaagcgccgctcccactctaggtccaagaga
aagtcccgctccaagtctccagctaaatcccgatctaagaagtcccgctctcgttctcac
tcccgcaagtcccacagccgctcggcgagtcggaagtcacgctccaagagccattcgaaa
ccccggtctgagcgtggctctcgcagccgttccaaggagaagtccgtgagcaagaaatcg
cgcagccgctcagcctcaccaatggagaatggggacaaaaaatcagtctcgcgttctcct
tctccacaggaggatcgtcaccgttccaaatcacccttaaagcgttctccgtctcgttct
ccttctcggtccaaatctcgctcgcgctctagatctgcctcacaagactga
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