Tachysurus fulvidraco (yellow catfish): 113648060
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Entry
113648060 CDS
T08119
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd00270
Cysteine and methionine metabolism
tfd01100
Metabolic pathways
Module
tfd_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
113648060 (dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113648060 (dnmt1)
03032 DNA replication proteins [BR:
tfd03032
]
113648060 (dnmt1)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113648060 (dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
tfd02048
]
113648060 (dnmt1)
Enzymes [BR:
tfd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
113648060 (dnmt1)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
113648060 (dnmt1)
DNA replication proteins [BR:
tfd03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
113648060 (dnmt1)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
113648060 (dnmt1)
Prokaryotic defense system [BR:
tfd02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
113648060 (dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
DNA_methylase
DNMT1-RFD
zf-CXXC
DMAP_binding
Motif
Other DBs
NCBI-GeneID:
113648060
NCBI-ProteinID:
XP_027010886
LinkDB
All DBs
Position
24:complement(5454510..5466853)
Genome browser
AA seq
1504 aa
AA seq
DB search
MPTRTSLCLPEDVKERLHALDKDDNSLSDEDCVKEKLRLLQDFLRDDTQVQLKNLEARLK
NSELTTEVYTSEVKAVLKKVLSLGKEGHGDGAEQNGHSNGFSENGSHKDNCEKERAMETQ
DQGGTMKSPSTSKARGGRRSKADSELKKSPASSRVTRNSGKQQTIVSMFSRVPKRKSDEV
NNEATNGDAEVNTEENDAEETREEKRLKTEVDEKQTTENSNAEKTKPLNTAKTPPPKCPD
CRQYLDDSDLKFFQGDPDDALDEPEMLTDERLSLFDSNEDGFESYEDLPQHKITNFSVYD
KRGHLCPFDSGLIEKNVELYFSCAVKPIYDDNPCMDGGVPAKKLGPINAWWITGFDGGEK
ALIGFTTAFADYILMEPSEEYSLIFALMQEKIYMSKIVVEFLQKNQDASYEDLLNKIETT
VPPAGLNFNRFTEDTLLRHAQFVVEQVESYDEAGDSDEQPIIVTPCMRDLIKLAGVTLGK
RRAARRQAIRHPTKIEKDVKGPTKATTTKLVYQIFDAFFAEQIEQNNKEGGVKRQRCGVC
EVCQAPDCGKCSTCKDMIKFGGSGRSKQACQKRRCPNMAVKEAEDDENIDEDDVLPLKDA
SKIMSQAKKKQTKNKITWVGDPIKTEGKRDYYMKVRVENEVLEVGDCVSVSPDDPSHALY
LARITALWEEDEKMFHAHWFCRGTDTVLGESSDPLELFLVDECEDMQLSFVHGKVNVLYK
APSDDWFMEGGLIDVIKVIEDDGKSFFYQLWYDGEFARFETPPKVVPEEDSKYKFCASCT
RNAEQQDQEVPRVVDPLDEENDTKVLYSLACLKGEQYRVGDGVYLKPEAFNFGVKSASPA
KRPHRKEDVDEDLYPEYYRKSSDYIKGSNLDAPEPFRIGRIKEIYCTKRSNGKPDASEVK
LRIYKFYRPENTHKGPKAGYHTDVNLLYWSDEEASVNMVDVLGRCRVEYGEDLVENVQEY
SSGGPDRFYFLEAYNAKSKTFEDPPNHARSVVNKGKGKGKGKGKGKGKASTQDAQEQETP
ELKVHKLRTLDVFSGCGGLSEGFHQANISETHWAIEMWDPAAQAFRLNNPGTTVFTEDCN
VLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYL
SYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR
AIILAAAPGEKLPRYPEPLHVFAPRACSLSVVVDDKKYVSNVTRGNGGIYRTITVRDTMS
DLPEIRNGASALEISYNGEPQSWFQRHIRGAQYQPILRDHICKDMSALVEARMRHIPLAP
GSDWRDLPNIEVRLRDGTTTKKLRYTHLDKKNGRNATGALKGVCTCSEGKPCDPADRQFN
TLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVREC
ARSQGFPDTYRFFGNILDKHRQVGNAVPPPLSKAIGLEIKKCVLEKVKEDATESVKQEKM
EVCE
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccaggacctcgctgtgtttacctgaggatgtaaaagaacgattgcatgcgctg
gataaagatgacaacagtttgtcggatgaggattgcgtgaaggagaagctcaggttactg
caggactttctgcgtgatgacactcaggttcaactcaaaaaccttgaggccagactgaaa
aactctgaacttacaacggaggtttacacatctgaagtgaaagctgtgctgaagaaggtt
ttaagtttgggcaaggaaggtcacggcgatggggcagagcagaacgggcactcgaatggc
ttctctgaaaatggatctcataaagataactgtgaaaaagagagagccatggaaactcag
gatcaaggaggaaccatgaagtcacccagcacatcaaaggcaaggggtggcagacgcagc
aaagcggactctgagcttaaaaaatctcctgcaagctcaagggtcacacgcaactctgga
aaacaacaaacgatcgtgtcaatgttttcaagagtgcccaagcgcaagtctgatgaggtg
aataacgaagctacaaatggtgatgcagaggttaacactgaggaaaatgatgctgaggag
acccgtgaagaaaagcgtcttaaaacagaagtggacgagaaacaaaccactgaaaactcc
aatgctgagaagaccaagcctttgaacacagccaagactcctccccccaagtgtcctgat
tgcaggcagtacctggatgactctgacctgaagttttttcagggagatcctgatgatgcg
cttgatgaacctgagatgttaacagatgagcgtctctcgttgttcgattcgaatgaagat
gggtttgaaagttatgaagatttgcctcaacacaaaattactaactttagtgtctatgac
aaacgtggccacctgtgtccttttgattctggactcatcgagaagaatgttgaattgtac
ttcagttgtgcagtcaagcccatctatgatgacaatccttgtatggatggtggtgtacct
gccaaaaagctgggtccaatcaatgcctggtggatcactggctttgatggaggagagaaa
gctctgattggcttcaccacagcgtttgctgactacatcctgatggagccgagtgaggaa
tactctctgatctttgccctgatgcaggagaaaatctacatgagtaagattgtggttgag
tttcttcagaagaaccaagatgcttcatatgaggacctcctgaacaaaattgagaccaca
gtccccccagctggactgaacttcaatcgcttcactgaggacacacttttgcgccatgcc
cagtttgtcgtggagcaggtagagagctacgatgaggccggagactctgacgaacagccc
atcattgtaaccccatgcatgagagacctaatcaaattggctggagtcaccctgggcaag
aggcgagcagcaagaagacaagctattcgtcatccaacaaagattgagaaggatgtcaag
ggtccaacaaaagctaccacaacaaagcttgtgtaccagatctttgatgccttctttgca
gagcagattgagcagaataataaagagggtggagtcaagagacagcgctgtggggtttgt
gaggtgtgccaagcccctgattgtggtaaatgctctacatgtaaggacatgatcaaattt
ggaggcagtggtcgcagcaagcaggcctgtcaaaagaggaggtgccccaacatggcagtg
aaggaagcagaggatgatgaaaatattgatgaggatgatgtcttgccacttaaagacgca
tcaaagattatgtcccaagctaagaaaaagcagaccaagaataagatcacttgggtggga
gaccccattaagacagaaggaaaacgtgactactatatgaaagtacgtgtggaaaatgag
gtgctggaagttggagactgtgtgtctgttagcccggatgacccatctcatgccctatac
ctcgccaggattacagctttatgggaggaagatgagaagatgtttcacgcgcactggttc
tgccgtggaacagacacagttcttggcgagtcctcagaccctctggagcttttccttgtg
gatgagtgtgaggacatgcagctgagctttgtgcatggcaaagttaatgtgctatacaag
gccccctcagatgactggttcatggagggtggacttattgatgtcataaaagtcattgag
gatgatggaaaaagtttcttttatcagctctggtatgatggggagtttgctcgttttgag
acaccacccaaggtcgtcccagaggaagactccaaatacaagttctgtgccagctgcact
agaaatgcagagcaacaggatcaagaggtgcctcgtgtagttgatcccctcgatgaggag
aatgacactaaggtcttgtattccctggcttgcctgaagggggagcagtacagagtggga
gatggtgtatacttgaaacctgaggctttcaactttggggtgaaatctgcaagcccggca
aaacgtcctcatcgtaaagaggatgtggatgaggacctttatccagaatactacaggaaa
tcctcagactacattaagggatccaatctggatgctccagagccattccgtattggtcga
attaaagagatttattgtacaaagcgcagcaatggcaagccagatgcatcagaagtcaaa
ctacgcatctacaaattctaccgaccagagaacacccacaaggggccaaaggcaggctac
cacactgatgtaaacctactttactggagtgatgaagaggcgtctgtgaacatggtcgat
gtactcggtcgctgtcgtgtagagtatggtgaagacctggtggagaatgtgcaggagtac
tccagtggtggacctgatcggttttacttcctagaggcctacaatgccaaatcaaaaacc
ttcgaggacccaccaaaccatgctcgctctgttgtaaacaagggcaaaggaaaaggaaag
ggaaaaggtaaagggaaaggaaaagcttccacacaggatgcacaagagcaagagactcca
gaactcaaagtccacaaactgcgcacactggatgtgttctctggctgtggtggtctgtct
gaaggctttcatcaagcaaatatctctgagacccattgggcaattgagatgtgggatcct
gctgcacaggccttcaggctaaataacccaggaaccacagtgttcacagaggactgcaat
gttttgctcaagcttgtaatgtctggagagaagaccaactcccttggccagaaactccca
cagaagggtgatgtggagatgctgtgtggagggccaccatgccaaggcttcagtggaatg
aatcgctttaactcgcgcacttactcaaagtttaagaattcccttgttgtctcttatttg
agttactgtgactactacaggccaaagttcttcttgttggaaaatgtcaggaactttgtg
tcctttaagcgctccatggtcttaaaactcactctgcgttgccttgtgcgcatgggctac
cagtgcacatttggtgtactacaagcagggcagtatggagtagcccagacacgacgcagg
gcaattatactggctgctgctccaggagaaaaactcccacgctacccagaaccactgcat
gtgtttgctccaagagcatgctccctaagtgtagtggttgatgacaaaaaatacgtctcc
aatgtcaccagagggaatggtggtatttatcgaaccattacagtccgggacaccatgtcg
gacctcccagagatccgcaacggagcctctgctctggagatttcctacaatggcgagcca
caatcctggttccagagacacatccggggtgcacaataccagcccattctcagggaccat
atttgtaaggacatgagcgctctggtcgaagcacgtatgcgtcacatccccttggcacca
ggctctgactggagagacttgcctaacattgaggtgcgactacgggacggaacaacaaca
aagaagttgcggtacacgcacttggacaagaaaaatggccgtaatgccactggtgccctc
aaaggagtgtgtacttgttctgaaggtaaaccatgtgacccagcagacaggcagttcaat
acactgattccatggtgcttgcctcacacgggtaatcgtcataaccactgggctggactg
tatggtaggctggagtgggatggcttctttagcaccacagttaccaaccctgagcctatg
ggcaagcaggggcgtgtgcttcatccagaacagcaccgcgttgttagtgttagggaatgt
gctcgttcgcaaggtttccctgatacgtaccgcttcttcggcaatatcctggacaaacac
agacaggttggaaatgcagtgcctccacctctttctaaagccattggacttgaaatcaag
aaatgcgttctggaaaaggtgaaggaagatgctacagaatctgtgaaacaggagaagatg
gaggtatgcgagtag
DBGET
integrated database retrieval system
