Tachysurus fulvidraco (yellow catfish): 113648107 Help Entry 113648107         CDS       T08119                                  Symbol xab2 Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism tfd  Tachysurus fulvidraco (yellow catfish) Pathway tfd03040   Spliceosome Brite KEGG Orthology (KO) [BR:tfd00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     113648107 (xab2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tfd03019]     113648107 (xab2)    03041 Spliceosome [BR:tfd03041]     113648107 (xab2) Messenger RNA biogenesis [BR:tfd03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      113648107 (xab2) Spliceosome [BR:tfd03041]  Complex B   Other components    Prp19-related factors     113648107 (xab2)  Complex C     113648107 (xab2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf TPR_2 TPR_12 TPR_19 TPR_8 TPR_16 TPR_15 ARM_TT21_C ARM_TT21 TPR_MalT TPR_1 PPR NRDE-2 Tcf25 LTN1_E3_ligase_6th N_NLPC_P60 Motif Other DBs NCBI-GeneID:  113648107 NCBI-ProteinID:  XP_027010974 LinkDB All DBs Position 24:4605652..4615850 Genome browser AA seq 847 aa AA seqDB search MPIFNGKQDVVFEEDDLPYEEEIIRNPYSVKCWMRYIEHKQNAPKSVLNMIYERALKELP GSYKLWYNYLRERRKQIKGKCITDPVYEEVNNCHERALVFMHKMPRIWLDYCQFIVSQCK ITRSRRTFDRALRALPITQHPRIWPLYLKFARKLPLPETAIRVYRRYLKLSPENAEEYID YLHSVGRLDEAAVRLAAVVNDEGFVSKEGKSNYQLWHELCDLISKNPDKVTSLNVGAIIR GGLTRFTDQLGRLWCSMADYYIRSGHFEKARDVYEEAIQTVVTVRDFTQVFDSYAQFEES MIAAKMETTSEMGQDDDDDIDLELRLARFEQLITRRPLLLNSVLLRQNPHNVHEWHKRVK LYDGIPRQIINTYTEAVQTVDAVKATGKPHSLWVSFARFYEENEQLDDARTIFEKATKVN YKQVDDLAAVWCEYGEMELRHENYDQALRILRKATAIPARKAEYFDSSEPVQNRVYKSLK VWSMLADLEESLGTFQSTKSVYDRIIDLRIATPQIIINYAMFLEEHTYFEESFKAYERGI ALFRWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPPKFAKTIYLLYAKLEEE YGLARHAMAVYERSTQAVETEERHLMFNIYIKRAAEIYGVTHTRPIYQKAIEVLPDEHAR DMCLRFADMESKLGEIDRARAIYSFCSQMCDPRMTAHFWQTWKEFEIRHGNEDTIREMLR IKRSVQATYNTQVNFMSSQMLKATTSTTVSDLAPGQSDIDDMKMLEQKAQQLAAEAEQDK PKLKDKILFVRSDTSRSELAELAKQANPDEIDIDDDEEDGDGDGEPDEVQLEQKSVPTAV FGGLKDD NT seq 2544 nt NT seq  +upstreamnt  +downstreamnt atgcctatttttaacggaaagcaagacgttgtgtttgaggaagatgatttgccgtatgag gaagaaatcatcaggaacccgtactcggtgaagtgctggatgcgctacatcgagcacaaa cagaacgcacccaagtcagtgctgaatatgatttacgaacgagcgcttaaagagctaccg ggcagttataaattgtggtacaattacctgagagagagaaggaagcagatcaaaggaaaa tgcatcacagatccagtgtacgaggaggtcaacaactgccacgagagagcgctggtcttc atgcacaagatgccgaggatttggctggattactgtcagttcatcgtgtctcagtgcaaa atcacaagaagtcggcgcacgtttgaccgagcgctcagagctctgcccatcacacagcac ccacgcatctggcccctgtacctcaagtttgctcgaaagttacccctgcctgagacagcc atccgggtttatcgacgctatctcaagctttctccagagaatgcagaggagtacatcgat tacctgcactctgtaggacggctggacgaggcggcggtgcggctggcagccgtggtcaac gacgaagggtttgtctcaaaagaggggaagtcaaactaccagctctggcacgagctttgt gacctcatctccaagaacccagacaaggtgacctctctgaacgtcggtgccatcatccgt ggtggtctcacgcgctttacagatcagctgggcaggctctggtgctccatggctgattac tacatccgcagcggccatttcgagaaggcgcgtgacgtgtacgaagaggcgattcagact gtcgtcaccgtgcgagacttcactcaggtgttcgacagctacgcccagtttgaagagagc atgatcgccgccaagatggagaccacgtccgagatgggacaagacgacgacgacgacatc gatctggagttacgcttggctcggttcgagcagctgatcacacgccggccgcttttactg aacagcgtgctgctgaggcagaacccacacaacgtccatgagtggcacaagagagtcaaa ctgtacgacggaattcctcgccagataataaacacctacaccgaagccgtgcagaccgtg gatgctgtgaaagccacggggaagcctcactcactctgggtctcgttcgcccgcttctac gaggaaaacgaacagctggatgatgccaggacgatcttcgagaaagccaccaaggtgaac tacaagcaggtggacgacctggcggccgtgtggtgtgaatacggagagatggagttacgg cacgagaactacgaccaggctctacgtatactccggaaagccacggcgatcccggcgaga aaagccgagtacttcgattcgtcggaaccggtgcagaatcgagtgtataaatccctgaag gtctggtccatgctggcagatttggaggagagcctcgggaccttccagtcaactaaatcc gtgtacgatcgcatcatcgacctccgcatcgccacgcctcagattatcatcaactacgcc atgttcctcgaggaacacacttactttgaggaaagctttaaggcgtacgagcgcggcatc gcgctgttcaggtggccgaacgtctacgatatctggaacacgtacctcaccaagttcatc gatcgctacgggggcaagaagctggagagagcacgagacctgtttgagcaggctctggat gggtgtccacccaaattcgccaaaaccatctacctgctctatgctaagctggaggaggag tatggactggcccgccacgccatggccgtgtacgagagatcgacgcaggccgtggagacc gaagagcgccaccttatgttcaacatctatatcaagagagctgccgagatttacggagtc actcacaccagacccatctatcagaaagccatcgaggttctcccagacgagcacgccagg gacatgtgtctacgcttcgctgacatggagagcaaactgggtgagatcgatcgtgcgaga gctatttattccttctgctcccagatgtgcgatcccaggatgactgctcatttctggcag acctggaaggagtttgagatccggcacgggaacgaggacacgatccgcgagatgctccgg ataaagagaagcgtccaagcgacctacaatacacaggtcaacttcatgtcctcacagatg ctcaaagcaacaaccagcactacggtgtcagaccttgccccaggacagagtgacattgat gacatgaagatgttggagcagaaagcacagcagctggctgcagaggctgaacaagacaaa cccaaacttaaagacaagatcctctttgtcaggagtgacacctctcgcagtgaactggct gaactcgccaaacaggccaatccagacgagattgacattgacgatgacgaagaggacgga gatggagatggagaaccagacgaagtgcagctcgagcagaaaagcgtccctacagctgtg ttcggaggactgaaggacgactga

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