Tachysurus fulvidraco (yellow catfish): 113648134
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Entry
113648134 CDS
T08119
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04382
Cornified envelope formation
tfd04510
Focal adhesion
tfd04512
ECM-receptor interaction
tfd04810
Regulation of actin cytoskeleton
tfd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113648134 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113648134 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113648134 (itgb4)
04810 Regulation of actin cytoskeleton
113648134 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113648134 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113648134 (itgb4)
04515 Cell adhesion molecules [BR:
tfd04515
]
113648134 (itgb4)
04090 CD molecules [BR:
tfd04090
]
113648134 (itgb4)
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
113648134 (itgb4)
Exosomal proteins of bladder cancer cells
113648134 (itgb4)
Cell adhesion molecules [BR:
tfd04515
]
Integrins
Integrin beta subunits
113648134 (itgb4)
CD molecules [BR:
tfd04090
]
Proteins
113648134 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
PSI_integrin
EGF_Teneurin
EGF_2
I-EGF_1
EGF_integrin
EGF_TEN
vWA_SIBA-E
SEA
I-set
Motif
Other DBs
NCBI-GeneID:
113648134
NCBI-ProteinID:
XP_047656168
LinkDB
All DBs
Position
14:complement(298861..330644)
Genome browser
AA seq
1917 aa
AA seq
DB search
MGRWAWHLSVIFLSLILIAHHDVSANRCAASKATSCSACLQTGFGCAYCPDEVFGFDRCD
LLENLKSHGCVQIVSVQSSMSMLKNIEINKNLKHSQVAPQQMSMTLLPGEEREVEMEVFE
PARGPLDLYILMDFSNSMSDDLDNLKKMGDELARLVGTLSDDYTIGFGKFVDKVTEPQTD
MRPSKLKEPWAKSDPPFSFQHVITLTSNISTFRQILQKERISGNLDAPEGGFDAILQAAV
CQSQIGWRQHSTHLLVFSTESAFHYEGDGINVLAGILPRNDEACHLDTKGLYTHATQQDY
PSVPTLVRLLVQNNIIPIFAITNHSLSYYEMLLHYFPIAELGVLTDDSSNILNIIKNAFD
SIRSKISIQTENKPKAIISQILSASGVASDYGKFKIQPGEIGKFKVLLSAKTSVNDKPVC
SLNTNERTGTIRVKPTTFSSALEIQTTVLCETCNCEQFPITKASRCSGNGDLVCGTCKCH
NNWLGPFCNCSSQMSSDVSGCVAPGSTQPCNGRGDCLCGTCLCYNPNQYEGQFCQYDRSQ
CHRSGGFLCNDRGRCYMGGCVCDSGWTGNACECPLSNATCLDNKGGLCNGHGVCKCGRCE
CEYAGLELGTTCEPNFQAQLGMCESRRSCVQCQAWKTGEIKGDKCKECPFTIKMVDELKD
RDKVIETCEYRDEEDDCTYHYTVNYPNNPSDKEHEVEVLKKKDCPPGGFLWLIPLIMFLM
LLLGLLLLCCWKYCACCKACLARLCVCSPCCAMGRIVGFKEDHYMLHQSMLSSDHLDTPM
VRTGPTNSTDVVRWKVKDNVHRGPNLPQNQIQPNPKEIIDVPLSLRLHRAFSDELSRPEA
RNTEMLKQEVEENLNNVFRQIPGAHRVQKTRFRTQRNAGKRQNNTIVDTVLSAPRSSYHN
ITNLVHKQVQSGNFSDLKVVPGYYTVATDREAMGVVELQEDVESVDVRVPLFIKDEDDDK
KQLLVEAIDVPMGIANIGKRYVNITVIKEHAKSILTFLQPSYTFSRQDGVANIPISRDII
EDGRTQFTYCTRDLTAKDKKDYISVDGDLMFQPGETQKMVPVKLLELSEGDALLDKQPKQ
FVMDLSNPLQGAKLGKYPRTTINIADKPESSVIMFKNSTQNFNISDALYTVPVIRTQGLE
NPSTVNWRTISSRFNLSGPVKFAPGEMEKNIVIDTRTQQMVPKESFQLELFDPSANSLIR
DRKTTLVNITDSRGDFVSKTGSVPVKASSPTGRIFAPTNIEATPTGPKKIHLNWNPQPGA
KGYKVKYWIYGDPEAEAQVVDVKNTHAELTNLYPYCDYEMRVCSYNAQGDGDYSDITQCQ
TLEDVPSEPGRLAFNVIGQTVTQLSWAEPAEPNGVITEYEVVYTPINEDSKPIGPDKKVK
IDNPKKRMLLIENLQKSQTYRYKVRASNKVGWGPYRDATINLATQPLRPMSIPIIPDIPI
VDAEAGDDYDSFLMYSNEVLRSPTSSTRPSVSEFSEEQIINGKWDQGFLFPGGSGSMSRN
ISTSSSYNLSPRPGGANQTVETTMTYITNKGGSMPRKHDIHTEDVTLRKRSENRNYYDND
GIRDSIVMSELTGGFSEVLSGSSFSQSTTTSYSMNSRVHNHSDDVNEALQNLDRVLQETR
LQRGVPETPSRLVFSALGPTALKVSWQEPHCETPIRRYCVLYQLLSGGEIKSIDINNPTQ
NSVMVQDLLPNQSYLFKVKAESHEGWGPEREGVITIESAVDPKSPLSPVPGSSFTLSTPS
APGPLVFTALSPETLQLSWDKPRKPNGEIVGYVVTCEQLHGGGDQRSFQLSGNSATTLTV
SDLSENVPYKFKVQAQTTQGFGPEREGIITIESQDGSVGQYGSQSVMRREVFNMPSQSTT
QTTHTMFTDPFITPEGIMMSGRQVTQHSEISGSITRQVEMVQRGVKSTVTKKQYYEA
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgggaagatgggcctggcacctcagtgtgatatttctctctcttatcctgattgctcat
catgatgtcagtgccaatcgctgtgcagcgagtaaagccaccagctgctctgcatgtctg
cagactggatttggctgtgcatactgtcctgatgaggtgtttgggtttgatcgatgtgac
ctgctggagaacctgaaatctcacggctgtgttcagatcgtatcagtgcagagctccatg
tccatgctgaagaacattgagattaataagaacctaaaacactcccaagtggctcctcag
cagatgagtatgactctgttacctggtgaggaacgtgaggtggagatggaggtgtttgag
ccagcacgaggtccacttgacctctacattctcatggacttctccaactccatgtctgat
gatctggacaacctcaagaagatgggagatgagctagctcggctggtcgggacgctgtct
gatgactacaccatcggatttggcaaatttgttgataaagtcactgaaccacagacagac
atgagaccatcaaagttgaaggagccgtgggcgaaaagtgacccgcctttctccttccag
cacgtcatcactctcaccagtaacatcagcactttcagacagatcctgcagaaggagaga
atatctggcaacctggatgctcctgaggggggatttgacgccatcctgcaggccgccgtg
tgtcagtctcagatcgggtggaggcaacacagcacccatctcctggtcttctccaccgag
tcggcgttccattatgaaggagacggcataaacgtgctggcgggaattttaccacggaat
gacgaggcatgtcacctggacactaagggtctgtatacacacgccacacagcaggattac
ccatcagtccccacactggtgcggctcctcgtccagaataacatcatccccatcttcgcc
atcaccaaccactcgctttcctactatgagatgctgcttcattatttccccatcgctgag
ctcggagttctgacagacgattcgtccaacatcctcaacatcatcaagaacgccttcgat
agtatccgttcaaagatcagtatccagactgaaaacaaacctaaagcgatcatttctcag
atcctctcagcatcaggagtcgcttcagattatggaaaattcaaaatccagcctggagaa
atcggtaaatttaaagtgcttctgagcgctaagacaagtgtgaacgacaaacctgtgtgc
agtctgaacaccaacgagcgcacaggaaccatcagggtcaaacccaccacctttagctcc
gccctcgaaatacaaaccaccgtactctgtgaaacctgcaactgtgaacagttcccgata
acgaaggcgagtcggtgtagcggtaacggggacctggtgtgtggaacctgcaaatgtcac
aataactggttgggtcccttctgtaactgctcgtctcagatgtcctcagatgtaagtggg
tgtgtggccccggggtcgacacagccatgtaatggtagaggagactgtctgtgtgggacg
tgtctgtgttacaaccccaatcagtacgaaggacagttctgtcagtacgacagatcacag
tgccacagatcaggaggattcctctgtaacgatcgaggccggtgctacatgggtgggtgt
gtgtgtgacagtggatggacgggaaatgcatgtgagtgtcctctcagtaatgcaacctgt
ctggacaataaagggggtttgtgtaacggtcatggtgtgtgtaaatgtggacgatgtgag
tgtgaatacgccggactagagttgggaacaacatgtgaaccaaacttccaggcacagttg
gggatgtgcgagagcaggaggagttgtgtacagtgtcaggcctggaagactggagagata
aaaggagacaagtgcaaggaatgtccgtttaccatcaagatggtggatgagctgaaggac
agagataaagtgatagagacgtgtgagtatcgtgatgaagaagatgactgtacgtatcac
tacacagtgaattatcctaataatccctctgataaagagcacgaggtggaggtgctcaag
aagaaagactgtcctcctggaggttttctctggttgattcctctcatcatgttcctaatg
cttttgttgggtctcttactgctctgctgctggaaatactgtgcatgctgcaaggcatgt
ctggctcggctgtgtgtctgcagtccgtgttgtgcgatgggtcgtattgtggggtttaaa
gaagatcactacatgctccatcagtccatgttgagctcagatcacttggacacgccgatg
gtacggaccgggccgacaaacagcacagatgttgtgcgctggaaagtgaaagacaacgtg
caccgtggaccgaacctccctcagaaccagatccaacccaaccctaaagaaatcatcgac
gtccctctctctcttcggctccacagagcgttctccgatgaactttcacgcccggaagct
cgtaacactgagatgctcaaacaggaagtggaggaaaatctgaataatgttttcagacaa
attcctggtgctcaccgagtgcagaagaccagattcaggacccagaggaatgcagggaag
aggcagaacaacaccattgtggacacggttctctcggctcctcgctccagctaccacaac
atcacgaacctggttcataaacaggtgcagtctggaaacttcagcgatttgaaggtggtg
ccgggatactacactgtggccacagacagagaggcgatgggagtggtggagctgcaggag
gacgtggagtctgttgatgttcgggtcccactcttcatcaaagatgaggatgatgataag
aaacagttgctggtggaggccattgacgttccgatgggaatcgccaacatcggaaaacgc
tacgtcaatatcactgtgattaaagaacacgctaagagcatactgaccttccttcagccc
tcgtatacattctctcgccaagacggtgtcgctaacatcccgattagccgcgacatcatc
gaggacggtcgcactcagttcacctactgcacccgcgacctaactgcgaaggacaagaag
gactacatctcagtagacggagacctgatgttccagcctggagaaactcagaagatggtt
cctgtgaagctgctggagctcagtgaaggagacgccctgttggataaacaacctaaacag
tttgtgatggatctgagcaaccctctccagggcgctaaactcggcaaatacccccgaacc
accatcaacatagctgacaagccagagtcgagcgtgatcatgtttaagaacagcacgcag
aacttcaacatatcggatgcgctctacaccgtccctgtgatacgcactcagggtctggaa
aacccttccaccgttaactggagaacaatctcctcccgcttcaatctttccggtccggtc
aagtttgctcctggagagatggagaagaacattgtgattgacactcgtacacagcagatg
gtccccaaagaaagcttccagctggagctgttcgatccgagcgccaacagcctcatccga
gacaggaagaccacactggtcaacatcactgattccagaggagattttgtatctaagaca
ggatctgttccagttaaagcctcgtctcctactggacgaatttttgctccaactaacatt
gaagctacacctacaggccccaaaaaaatccaccttaactggaaccctcagcctggagcc
aaaggatataaggtgaagtactggatctatggagacccagaggctgaagcccaggtggtg
gatgttaaaaacactcacgccgaattgacgaatctctacccgtactgcgattatgagatg
cgtgtgtgttcatacaatgctcagggagatggggactacagcgacatcacacagtgccag
actcttgaggatgtcccgagtgaaccgggtcgcctggccttcaatgtcattggccaaact
gtcactcagctgagctgggcagaaccagcagagcccaacggcgtgatcacagagtacgag
gttgtctacacacccattaatgaggacagcaaacccattggacctgataagaaggtgaag
atcgacaaccccaagaagcgcatgctgcttatcgagaacctgcagaaatcacagacgtac
cgctacaaagtgcgtgcaagcaacaaggtaggatggggaccctacagagatgccaccatc
aatctggccacccagcctctcagacccatgtccattcccattattcctgatattcctatc
gtggatgcagaggcaggtgatgactacgacagctttctcatgtacagtaatgaagttctt
cgttcgcctacgtccagcaccagacccagtgtgtctgagttctcagaagagcagatcata
aatggaaagtgggatcaagggttcttgttcccagggggaagtggttccatgtctcgtaac
atcagtacatcttctagctacaacctctcaccccgccctggtggtgccaaccagacagtg
gagaccacgatgacttacataaccaacaaaggaggatcaatgcctcgtaaacacgacatc
cacacggaggatgtgacattgagaaaacggtcggaaaacaggaattattatgataatgat
ggtataagagactccatcgtgatgagtgaactgactggaggattctctgaagttctaagc
ggttctagcttcagccagagtacaactaccagctacagcatgaactcccgtgtacacaat
cactcagatgacgtcaatgaagctctgcagaacctggacagggttctccaggaaactcgg
ctgcaacgcggagtgccagaaaccccaagcaggctggtgttttcagctctgggcccaacg
gcactgaaggtcagctggcaggagcctcactgcgaaacgccaataagaagatactgtgtc
ctctatcagctcctcagtggaggtgaaataaagtccatagacatcaataaccctacacag
aattctgtgatggttcaggacttactgccaaaccagtcatacctgttcaaggtcaaagct
gagagtcatgagggttggggtcctgagagagaaggagtgatcaccatcgagtctgctgtc
gaccccaagagtcccctcagccctgttccagggtcttcatttactctcagcactcccagt
gctccaggtccactggtcttcactgcattaagtccagaaactctccagctcagctgggac
aaaccacgaaaacccaacggagagatcgtgggctacgtggtcacctgtgaacagctgcat
ggtggaggagatcagcgctccttccagctcagcggaaactcggccacgacgctgactgtt
tctgatctgagtgaaaacgtgccgtataaatttaaagttcaggctcagaccacacaaggc
ttcgggcctgagagagaggggatcatcaccatcgagtctcaggatggttctgtgggtcag
tacggcagtcagtctgtaatgaggagagaagtgtttaatatgccatcacagagcacaaca
cagacaacacacactatgttcactgatccattcatcacaccagagggtattatgatgtca
ggcagacaagtcacacaacactcagagataagtggcagcatcacgaggcaggtggagatg
gtgcagaggggagtgaagtccaccgtcaccaagaaacaatattatgaagcctga
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integrated database retrieval system
