Tachysurus fulvidraco (yellow catfish): 113648160
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Entry
113648160 CDS
T08119
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113648160
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
113648160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
HIRA_B
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
eIF2A
Beta-prop_RSE1_2nd
Mcl1_mid
Beta-prop_EIPR1
WD40_like
NODP
Motif
Other DBs
NCBI-GeneID:
113648160
NCBI-ProteinID:
XP_047674728
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Position
9:60265..81768
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AA seq
1010 aa
AA seq
DB search
MKLLKPSWVSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVVIWNMAPVLREEDEKNENVP
KLLCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWKKAAFIGPSTVFGSSSKLANVEQ
WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEMVTSLSAHSGLVKGL
SWDPVGKYVASQADDRSLKVWRTIDWQLEANITKPFNECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKPRNGSSSKPTNPYCCC
AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDITWTLNGLGLLVCSMDGTVAFLDFSQD
ELGDPLNEEEKNAIHQKMYGKSLAITMETQLSSTIIENPEMLKYQQETRTSSGTLGSSTE
TPVPKLSSVVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSPALFNSVP
ILPGSSVTQLSSDSNTSLTLRVTHDPSAPSQTKPTQDAAALSQSKSITDNKDSSNVLKSP
LLLTAASKIEPMKALDSRFTERSKVTPGVSSSPAAVSTAPIDRLKDGSGGRTDGLKDWKG
REDSSSDSEDKVVQKMVPTLTKRRNDIDGGEVVEKRKKGRPRKDSKLMMSVPQVYTQAPV
PVEKEISRVMAPVAVKLKTPAVQKSFSTQVGLDPVVYLEVDNELCVVAGSRISQLRFSTN
GREWNMVLTSRIVMATASSDVVAVVCEDRTLSIFSACGRRLVPPIMLSAPITALHCSAHF
VMALTASATVSVWDMQKKVALVKNESLNCLLSGVDTVVFSMLTEHGVPVVALSNGRSYCF
NSAMETWNLIVDKQDSLVQCADFSSCVTSHDAPGCTGPLATSQGRNLSAGRLASRLSSTP
HHVQQVMTLSFLENQLSSALILHSTNEYRHWLLIYTRFLVNEGYEQRLRELCKDLLGPVH
KSSSSSWESTVLGLRKRDLLMDVLPVVGQNLRFQRLFTEYQDQLDLLRPK
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgaaaccgagctgggtgtcgcacaatggaaagcccatattttcagtcgat
attcatccagatggaacgaagtttgccaccgggggacaaggagaggattctgggaaggtg
gtgatctggaacatggctccagttctgcgagaggaggatgagaaaaatgagaatgtgccc
aagttactgtgtcagatggacaaccacttggcttgtgtaaactgtgtgcgatggtcaaat
aatggtctgtatctggcttcgggaggagatgacaaactcgtcatggtgtggaagaaagca
gcgtttataggtccaagtacagtgtttggttcaagtagtaaacttgccaatgtggagcag
tggaggtgtgtgaccatcctgaggaaccatacaggagatgtaatggatgtggcctggtct
cctcatgacgtgtggctcgcctcctgcagtgtggacaacaccatcgtcatctggaatgca
cgtaaattcccggagatggtgacctctctctctgcccactcgggcctggtgaaggggtta
tcctgggatcctgtagggaagtatgtggcatctcaggcagacgatcgcagcctgaaggtg
tggagaaccatcgattggcagctggaggcgaacatcactaaaccctttaatgagtgtgga
ggaaccactcatgttctgcgtctcagctggtctcctgatggtcagtacttggtctcggct
catgcgatgaacaactctgggccgacggcgcagatcatcgagcgtgacggctggaaaacc
aacatggactttgtgggacatcggaaagctgtaactgtagtgaagtttaatcctaagatc
tttaagaagaaaccgaggaacggcagctcatccaaacccactaatccatactgctgctgt
gccgtgggcagtaaagaccgctcgctctccgtctggctgacttctctgaagcgccctctg
gtggtcattcatgacctgtttgacaaatccatcatggacatcacctggacactaaatggt
ttagggttgttggtgtgctcaatggatggcactgtggcctttttggatttctctcaggat
gaacttggagatccacttaatgaagaagagaagaatgctattcaccagaagatgtatggt
aagagcttggccatcaccatggaaacgcagctctcctccaccatcattgagaatcctgag
atgctaaagtaccagcaggagacccgaacctccagtggcaccctgggttccagcacagag
accccagtccctaaactgagcagtgtggtgaacggtgaatcactggaggacatcaggaag
aacctgctgaagaaacaggtggagacgagaaccgcagacgggcggaggagaatcacaccc
ttgtgtatcgcacaactagacacaggggacttctcccctgctctgtttaacagtgtcccc
atcctgcctggctcgtcggtcactcagctgtcctcggactcgaacacttcactcaccctg
agagtcacacacgacccatcagctccgtcccaaactaaacccactcaggacgcagcagct
ttgtcccaatccaagagcatcactgacaacaaggacagctccaacgtactgaagtctcct
ctactgctcactgcagcctctaagattgagccgatgaaggccctggactcacgcttcact
gagaggtcaaaggtcacccctggagtcagcagttcacctgctgctgtaagcactgcacct
atagacaggcttaaggatggcagcggtggaaggactgatgggctaaaagactggaaggga
cgagaggactcgagcagtgacagtgaagataaggtggtgcagaagatggtgcccacttta
actaaacgcaggaacgatatagatggaggggaagtggttgagaaacggaagaaggggcga
cccaggaaggattccaagctgatgatgagcgtaccccaggtgtacacacaggctccggtc
ccagtggagaaggagatatcacgagtcatggctcctgtagcggttaagctcaaaacacct
gcagtacagaaatcatttagcacacaggtgggcttggaccctgttgtgtatttggaggtg
gacaacgagttgtgtgtagttgctggttctcgtatcagtcaactccgcttcagcactaac
ggccgagagtggaacatggtgttgaccagccgtattgtcatggcaacggccagcagtgat
gtggtggccgtggtgtgtgaagatcggaccctctcaatattttctgcatgtgggcggaga
cttgtcccaccaattatgctctctgcaccaatcacagctctgcattgctctgcccacttt
gtgatggctctgactgcctcagccacagtgtctgtctgggacatgcagaagaaagtcgct
ctggtcaaaaacgagtctctcaactgtcttttatcaggtgttgacacagttgtgttctct
atgttaacggaacacggcgttcctgtagtcgctctgtctaacgggcgctcctactgcttt
aactctgctatggagacatggaacctgattgtggataaacaggactctctggttcagtgt
gcagatttcagtagttgtgtaacttcccatgatgcaccgggctgcacaggacctctcgcc
accagtcagggacggaacctgagtgcgggacggttagcgtctcgtctctcgtccactcct
catcatgttcagcaggtgatgactctgtccttcctagagaatcagctgtcctctgcttta
attctccactccactaacgagtacagacactggctgctcatctacacccgcttccttgta
aacgagggttatgagcagcggttgagggaactttgtaaggatttattggggccggttcat
aaatccagcagcagttcttgggagtccacagtgctgggtttgaggaagagagacctgctg
atggacgtgctgccggtggttggacagaatctacgcttccagcgtctattcactgagtat
caggaccagctggatctgctccgccccaaatag
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