Tachysurus fulvidraco (yellow catfish): 113648273
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Entry
113648273 CDS
T08119
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03410
Base excision repair
tfd04210
Apoptosis
tfd04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113648273 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
113648273 (parp1)
04217 Necroptosis
113648273 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfd03032
]
113648273 (parp1)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113648273 (parp1)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113648273 (parp1)
Enzymes [BR:
tfd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
113648273 (parp1)
DNA replication proteins [BR:
tfd03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
113648273 (parp1)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
113648273 (parp1)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
113648273 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ECR1_N_2
MFAP1
Motif
Other DBs
NCBI-GeneID:
113648273
NCBI-ProteinID:
XP_027011196
LinkDB
All DBs
Position
16:16712782..16731436
Genome browser
AA seq
1019 aa
AA seq
DB search
MADSQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAVQSSSDISGFTDLRWEDQEKVKKAIESGGSVGGKADRKGAGKGEKSLNEFAVEYAKS
NRSTCKGCDQKIEKDHIRISKKSVDPEKPQLGLIDRWYHTGCFVSRREELVFKPEYSAPQ
LKGFAALRAEDQNELKKRLSAVKAEGKRKADSVDGDSVSKKKKKEEEEEKKQLEMKLKEQ
SQLIWGIKDKLKKCCSVNDMKELLIANEQEVPAGESNILDRLSDCMAFGSLKPCETCKGQ
LVFRSDAYYCTGDISAWTKCVGKTQTPNRKDWVTPKEFHEIPYLKKFKFKRQDRVFPKEP
PAAPSAAPASSTVTSASASAASGFLTELPAEVPTDKPLTGLKVLSVGKLSKNKDELKAVV
EELGGKITSTVNKAMFCLSSRKEVEKMSKKMEEVRDAGVRVVSEEFLIDIKSSGKGLREL
ISLHGISPWGAEVKDEAQASTAAAKSSGSSKSLGRGSEDEGSSKSKTMKLMVKGGAAVDP
DSGLKDCAHVLDQNGKIYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTT
IGGHKLEKFYDKNSAMDNFRSVYEEKTGNSWTSSSFTKYPNKFYPLEIDYGQDEEAVKKL
KASSGTKSKLAKPVQELIRMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLTK
VQQAVSDNASEAQILDLSNQFYTLIPHDFGMKKPPLLSNLNYIQAKVQMLDNLLDIEVAY
SLLRGGAEDNKKDPIDLNYEKLKTKIQVVDKSSEEAQIIQQYVTNTHAATHNTYTLEIEE
IFKIEREGEYQRYRAFKDLPNHQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGV
YFADMVSKSANYCHTSQADPVGLILLGEVALGNMHELKKASHITKLPKGKHSVKGLGRTA
PDPSATVSFNGVDVPLGKGSNTNIDDTSLLYNEYIVYDVAQVNLKYLLKIRFNYQTSLW
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcacaggaggacaagctttacaaagccgagtatgcaaaaagcggacgggct
tcgtgtaagaagtgtaaagaaaacattgctaaagactcgctgaggatggctatcatggtg
cagtcgcccatgtttgatggtaaagtgccacactggcatcatttctcgtgcttctggctc
cgcgcggccgtgcagtcgtcgtcggacatctcgggctttacggatcttcgctgggaggac
caggagaaagtaaagaaggccatcgaaagcggaggatctgttggtggtaaagcggaccgt
aaaggagcaggtaaaggagagaagtcgctgaatgaattcgcagtggagtacgccaagtcc
aacaggagcacctgcaaaggctgtgatcagaaaatagagaaggaccatattcgcatatcg
aagaaatcggtggatccggagaagcctcaactgggtctgatcgatcgctggtaccacacg
ggttgctttgtgagtcggcgcgaggagctggtgttcaagcccgaatacagcgcgcctcag
ctcaaaggcttcgccgctctgcgtgccgaggaccagaacgagttgaagaagagactctcg
gctgtcaaggctgaggggaagaggaaagccgactccgtcgacggagacagcgtctcgaag
aagaagaagaaagaggaagaagaggagaaaaaacaactggagatgaagctgaaggagcag
agccagttgatttggggaattaaagacaaactgaagaaatgctgttcagtcaatgacatg
aaggagcttctgatcgccaacgaacaggaggttcctgcaggagaatccaacatcttagac
cgtctgtctgactgcatggctttcggatcgttgaagccctgcgagacgtgtaagggacag
ctcgtgttcaggagcgacgcctactactgcacaggagacatctccgcctggacgaagtgt
gtgggcaagactcagacgcctaaccgcaaagactgggtcactccgaaggagtttcatgaa
attccctacctgaagaagtttaagttcaagcgtcaggaccgtgtttttcccaaagagcct
cccgctgctccctctgccgctcctgcgtcttctacggtcacttcggcttccgcctctgcg
gcttccggtttcctcactgagctccctgctgaagtgcccacagataaacctctgaccggg
ctgaaggtgctgtctgtggggaagctgagcaagaacaaggacgagctgaaggctgtggta
gaggagctgggaggcaaaatcaccagcactgttaacaaagccatgttctgtctcagctcc
aggaaggaagttgaaaagatgagtaagaagatggaggaggtgagggacgctggcgtgcga
gtcgtctccgaagagttcctcatcgatatcaagtcctcagggaaggggcttcgagagctc
atctccttgcacgggatctcgccctggggcgccgaggtcaaagacgaggcccaggcttca
acggcagccgcaaaatccagcggatcctccaagagcttggggagaggcagcgaggacgag
ggtagcagtaagtcaaagacgatgaagctaatggttaaaggtggagctgctgtagatccg
gactcaggtcttaaggactgcgctcatgtcctggatcagaacgggaagatctacagcgct
actctggggttggtggacatcgtccggggaacaaactcctactacaaactccagctgctg
gaggacgacgtacagaaacggtactgggtgttcaggtcctggggtcgagtaggaactaca
atcggaggacacaaactggagaagttttacgacaaaaactcggccatggataacttccgc
agcgtgtacgaggagaagacgggcaacagctggacctcgagcagcttcaccaaatatccc
aacaaattttatcctctcgagattgattacggacaggatgaggaagcggtgaagaagctg
aaagccagcagcggtaccaagtctaaacttgccaaaccagtacaggagctcatccgcatg
atctttgatgtagagagcatgaagaaggccatggtggagtttgagattgacctgcagaag
atgcctttggggaaactgagtaagagacagattcagagtgcgtactctctcctcacgaag
gttcagcaggccgtgtccgataacgcttcggaagctcagatcctggacctgtccaatcaa
ttctacaccctgatacctcacgacttcggcatgaagaaacctccgctgctgagtaacctg
aactacatacaggccaaagtgcagatgctggacaacctgctggacatcgaggtggcatac
agtctcctgcgtggtggcgccgaggacaacaagaaagacccgattgacctcaactacgag
aaactcaaaactaagatccaggtggtggataagtcatccgaagaagctcagattattcag
cagtatgtgacgaacacgcacgctgcaacccataacacctacacgctcgaaatagaagag
atctttaagatcgagagagaaggtgagtaccagcgttaccgcgccttcaaagacttaccc
aaccaccagctcctgtggcacggctcacgcaccaccaactacgccggcatcctgtctcag
ggtctgcgcatcgccccgcccgaggctcctgtcacaggatatatgttcggcaaaggcgtg
tactttgctgacatggtgtctaagagcgcaaactactgtcacacgtcccaggcggacccc
gtaggcctcatcctgttgggagaagtcgctctcggcaacatgcatgaacttaaaaaggct
tctcacatcacaaagctacccaaagggaaacacagcgtcaagggtttgggaaggactgcc
ccagaccctagtgctactgtgtcttttaacggagtggacgtaccgctgggaaaaggttcc
aacaccaacatcgatgacacaagcctgctttacaacgagtatatcgtgtacgacgttgct
caggtcaacctgaaatacctcctgaagattcgcttcaattatcagacttccctttggtga
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