Tachysurus fulvidraco (yellow catfish): 113648288
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Entry
113648288 CDS
T08119
Symbol
papola
Name
(RefSeq) poly(A) polymerase alpha isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113648288 (papola)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113648288 (papola)
Enzymes [BR:
tfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
113648288 (papola)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
113648288 (papola)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF6431
Motif
Other DBs
NCBI-GeneID:
113648288
NCBI-ProteinID:
XP_027011208
LinkDB
All DBs
Position
16:14108865..14125568
Genome browser
AA seq
798 aa
AA seq
DB search
MPFPIMNQAQPAQDSPKHYGITSPISLALPKESDLVHAQKLVQALKPFNVFEEELELQRR
ILVLGKLNTLVKEWIQDISRSKNIPPALIESIGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVDRSDFFTSFYEKLKEQEDVKDLRAVEEAFVPVIKLCYDGIEIDILFARLALQTIPEN
LDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVYKFFLVFSKWEWPNPVLLKQPVECNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRNVMVEEFKQGLAIMDEILQNKADWAKL
FESPNFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF
PGPKESDKTPEWCTMWVIGIEFRKMEGSELLNVDLTYDIQSFTDTVYRQAISSKMFETDM
KITAMHVKRKQLHQLLPDLVIPKRRKHSTESLRAVNESGVDLSLDSDNSMSIPSPTRTSS
AARTPFSASPHRSTGTSASSDSQGKVNTSGGTHSAAVSLSEPHAQKRPASPHHEENSTKK
LRTQQHLDLNEESVDKDNSTSLPSPTGTSRTAFSASPNHSTGTSSDSQGKMDMSVDTQPT
AACPSETETSSPVHVKKGPGSPLHDEQAKKLRLEEDSTSESMDQAADFADLSQASDFSAL
DREVKMETEAAESDAEGQVPLSQKASSTDLSDVPLPPANPIQVVKNSIKLRLMNVIQGAV
YEDYIQLHPKVHQDYSVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgccttttccaattatgaatcaggcacaaccagctcaggactccccaaagcattatggg
attacttcacccatcagcctggccttgccgaaagaatcggacctggtccacgcgcagaaa
ctggtgcaggcgctgaagcctttcaacgtgtttgaagaggagttggagctgcaacggaga
atccttgttctggggaaactaaacacactggtcaaggaatggatccaagacatcagtaga
tcaaagaatatccctccagcattgatagaaagcattggtgggaaaatatttacgtttggc
tcctataggttaggagtgcatacaaaaggtgccgatattgacgctctctgtgtcgcacct
cgacacgtggacaggtccgacttctttacctctttttacgagaagttaaaagagcaagag
gatgtcaaggacttaagggctgtcgaagaggcatttgtcccagtgattaaactgtgctat
gatggtattgagattgatatcctgtttgctcggttagctctgcagaccattcctgagaac
ctggacctccgggacgatagtttactaaagaatctggatatccgctgtatacggagtctg
aacggatgcagggtgaccgatgagattctccacctggtgcccaacattgagaatttcaga
cttactcttagagccatcaaactgtgggctaaacgtcacaacatatattcaaatatcttg
ggtttcttgggcggtgtgtcgtgggcgatgctggtggcgagaacgtgtcagctttacccc
aacgccgtggcttcaaccctcgtgtataaattctttcttgtgttttctaagtgggagtgg
cctaatccagtccttttgaagcaaccagttgagtgcaacctcaacctgccagtgtgggat
ccaagggtgacaccaagtgaccggtaccacctcatgcccatcatcacaccagcttatcct
cagcaaaactccacatacaacgtgtcggcgtccacccgcaacgtcatggtggaagagttc
aaacagggtctggccattatggatgaaatattgcagaacaaagcagactgggccaaacta
tttgaatctcccaacttctttcagaaatacaagcattatattgtgttgctagcaagtgcg
cctactgagaagcagcacctcgaatgggttggcctcgtcgagtccaagatccgaatcttg
gtaggaagcctggagaaaaatgagttcatcactctggcacatgtgaacccacagtcattt
ccaggacccaaggaaagcgataagacgccagaatggtgcacgatgtgggtcatcggtatc
gagttcaggaaaatggaggggtccgagcttcttaacgtcgacttgacatacgacatccag
tctttcacagacactgtgtaccgtcaggccatcagcagcaagatgtttgagactgacatg
aaaataacggcgatgcacgtgaagaggaagcagcttcaccagctcctgccagaccttgtt
atccccaaaaggagaaagcattcgactgaaagcctgcgtgctgtgaatgagagcggagtg
gacttgtctctggacagtgataacagcatgtccatcccctcgcccacccgcacctccagc
gctgccaggacacccttctctgccagtcctcaccgctccacagggacaagtgccagctca
gattctcaggggaaggtgaacacctcaggaggcacacattctgctgcagtgtctctatca
gagcctcatgcacagaagagaccggcctcacctcaccatgaagagaactccacgaagaag
ctccgaacgcagcagcatttagatttgaacgaggaaagtgtggacaaggataacagcacg
tccttgccttcacccactggcacctccaggacagccttctctgccagtcctaaccactcc
acagggaccagctcagattctcaaggaaagatggacatgtcagtagacacacagcctact
gcagcatgtccgtcagagaccgaaacctccagtcctgttcatgtaaagaagggaccgggc
tcaccgctccatgacgagcaagccaagaagctcagattagaggaggattctacctcagaa
tcaatggaccaggctgctgattttgccgatttatctcaggctagcgatttctctgcttta
gacagagaggtgaaaatggagacagaagcagcggagtcggatgcagaagggcaggtacca
ctatctcagaaagcgtccagcaccgatctttccgatgtccctcttcctccggctaacccc
atccaagtggtgaaaaactccataaagctcagactgatgaatgtgatccaaggtgccgta
tatgaagattatatacaactgcatccaaaagttcatcaggattatagcgtcttataa
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