Tachysurus fulvidraco (yellow catfish): 113648355
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Entry
113648355 CDS
T08119
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03040
Spliceosome
tfd05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113648355 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113648355 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113648355 (srsf5a)
Spliceosome [BR:
tfd03041
]
Common components
Common spliceosomal components
SR proteins
113648355 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
SET_assoc
OB_RNB
Motif
Other DBs
NCBI-GeneID:
113648355
NCBI-ProteinID:
XP_027011291
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All DBs
Position
4:130269..134263
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AA seq
277 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCNERVTIEHARSRRGRGGGGGGGAGSRFSPRFGGYRQSRSAGSRYGPPVRTEHRIIVE
NLSSRISWQVRKDLKDLMRKVGDVTFVDAHRANKNEGVVEFATHSDMKNAIEKLNGTELN
GRKLKLFEDRKRSRSRSRSRSSSRSRSRSRSKSGSRSHSREDKRESKREKRSRSRSRSPS
RTPEKKTSAKSESRSRSRSPTPRKQSRSRSASTESQH
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatgtcgtgtgtttatcggccgcctcagtcctcacgccagggagagagacgtg
gagaagttcttcaagggttatggacggatccgagagatcaacctgaagaacgggttcggc
ttcgtggagtttgatgaccacagagatgcggacgatgcagtgtacgagttaaatggaaag
gagctttgcaacgagagggtgaccattgagcatgctcgctctcgtcgtggtcgaggaggt
ggaggtggaggaggagcaggcagccggttctctcctcgattcggaggctaccgacagtca
cgcagtgcaggatccaggtacggccctcccgtgcgcacagagcacaggattatcgtggag
aatctgtcgtcccgtatcagctggcaggtgagaaaagacctgaaggacctgatgaggaaa
gtgggagacgtgacgtttgtggatgctcacagggcaaacaagaacgagggggtggttgag
tttgccacacacagcgatatgaagaacgccatcgagaagctgaacggtacagaactgaac
ggccgcaaactaaaattgtttgaggatcgtaagaggagccgcagcaggagtcgctctcgc
agctcctcccgttctcgctcccgttctcgctccaaatctggcagtcggagccacagccgc
gaggataaacgtgagagcaagcgagagaaacgctctcgcagccgctctcgctcacccagt
cgtactccggagaagaagacttcggccaagtctgagtcccgctcacgctcccgctctcca
actcccaggaaacaatctcgctctcgctcagcatccactgaaagccagcactga
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