KEGG   Tachysurus fulvidraco (yellow catfish): 113648430
Entry
113648430         CDS       T08119                                 
Symbol
stx1b
Name
(RefSeq) syntaxin-1B
  KO
K08486  syntaxin 1B/2/3
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    113648430 (stx1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tfd04131]
    113648430 (stx1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tfd04147]
    113648430 (stx1b)
Membrane trafficking [BR:tfd04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    113648430 (stx1b)
Exosome [BR:tfd04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   113648430 (stx1b)
  Exosomal proteins of other body fluids (saliva and urine)
   113648430 (stx1b)
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 Lzipper-MIP1 GNVR Spectrin_Anc-1 CAP_N
Other DBs
NCBI-GeneID: 113648430
NCBI-ProteinID: XP_027011398
LinkDB
Position
24:complement(517536..547173)
AA seq 288 aa
MKDRTQELRSAKDSDDDEEVVHIDRGNFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRLKLKAIEQSIEQEEVMNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAVFTDDI
KMDSQMTKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSQARKKKIMIIICCVILGVVLASTIGGTLGF
NT seq 867 nt   +upstreamnt  +downstreamnt
atgaaggaccgcacacaggaactgcggagtgctaaggacagtgatgatgatgaggaagtc
gttcacattgaccgaggaaactttatggacgagttcttcgagcaggtggaggagattcgt
ggctgcatcgagaagctgtcagaggacgtggagcaggtgaagaaacagcatagcgccata
ctggcagctcccaatcctgacgaaaaaaccaagcaggagttggaggatctcacagctgac
attaagaaaacagccaataaagtacgcttaaaattaaaagcaattgagcagagtattgaa
caggaggaggtgatgaacagatcatcagcagacctgcgaatccgcaagacacagcattcc
accctgtcacgtaagtttgtggaggtgatgaccgagtacaacacgacgcagtccaaatac
agagatcgctgcaaagaccgtattcagaggcagctggagatcactggaagaacaaccacc
aatgaggagttggaggacatgctggagagcggcaaactcgctgtcttcacagatgatatt
aaaatggactcccagatgaccaagcaggccctgaacgagatcgaaactcgtcacacggag
atcatcaagctggagaacagcatccgcgagctgcacgacatgtttgtggacatggccatg
ctggtggagagtcagggggaaatgattgacagaattgagtataacgtggaacattcggtg
gattatgtagagcgagccgtttctgacactaagaaggccgttaaataccagagtcaggcg
cgcaagaagaagatcatgatcatcatctgctgcgtaatcctgggtgtggtcttggcgtcc
accatcggaggaactctgggcttctag

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