Tachysurus fulvidraco (yellow catfish): 113648647
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Entry
113648647 CDS
T08119
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113648647 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113648647 (u2af1)
Spliceosome [BR:
tfd03041
]
Complex A
U2 snRNP components
U2 related factors
113648647 (u2af1)
Complex B
113648647 (u2af1)
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GFIT
Motif
Pfam:
zf-CCCH
RRM_1
zf_CCCH_4
Torus
zf-CCCH_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
113648647
NCBI-ProteinID:
XP_027011717
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All DBs
Position
18:complement(8761767..8768272)
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AA seq
228 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ
TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRHE
EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKRHRSRSRSRERRSRSRDRGRRDRERRRSRDRERYGRF
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacctagcgtccatttttggtacagagaaagacaaggtcaactgctccttc
tactttaagatcggagcatgtcgacatggagatcgctgctcccgactccataataaacca
actttcagccagaccatcttgatccaaaacatctaccgtaaccctcagaacagtgctcag
acagctgatgcctctcgctgtgccgttagcgatgtggaaatgcaggagcattatgatgag
ttctttgaggaagtcttcacggaaatggaggagaagtacggtgaggtggaggagatgaat
gtgtgtgataacctgggtgaccacctagttggcaatgtttatgtgaagttccggcatgag
gaggatgcagagaaagctgtgatggacctgaataaccgctggtttaatggccagcccatt
catgctgaactctcaccggttaccgacttcagagaagcctgctgcagacagtatgaaatg
ggggagtgcactcgaggtggcttctgtaactttatgcacctaaagccgatctcccgcgag
ctgcggagggaactgtacggacggcgtagaaaaaggcaccgctctcggtctcgctctcgc
gaacgtcgctctcgctcacgggatcgtggccgccgtgaccgggagaggaggagatcaagg
gatcgtgaacgctatggaaggttttga
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