Tachysurus fulvidraco (yellow catfish): 113648664
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Entry
113648664 CDS
T08119
Symbol
col17a1a
Name
(RefSeq) collagen, type XVII, alpha 1a isoform X1
KO
K07603
collagen type XVII alpha
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113648664 (col17a1a)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
UPF0261
Motif
Other DBs
NCBI-GeneID:
113648664
NCBI-ProteinID:
XP_027011757
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Position
18:complement(9177117..9200838)
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AA seq
1475 aa
AA seq
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MDRLITTKILNAEGGSGVSGKESVTTRTRLTSLPPKGSSSSVNTQRMLTSTSSSSLGSSS
GSGGTVQVEKRIITQSSTGGGGGGGGGGSSSNVISLGGSSSSVVQGATGRVSGGSSVTPS
SLGTSLSGAAGGLGASGVTSSIVTFGVYSGGGSGASANSSESWSSSQFVSSSSGDCGNLS
VGSMNLSGGGGHSLVMSSGGGAVMSAGGGSTKYTTSTTTSAMKTGSYSPVTQRKSSLTLR
TAGYEGSSSGNSSPEYTRKEYAAAAASVATRGRTQTRESEIRARLQSASPSTRWTELDDV
KKLLKGRSSSSSPPSSPTNTLPIPKKASVDTRIESHSGYDSTILESAYNGYGYHTNPNNL
SPNSTLQHNGLQNNLAFNTSTMSSGLSAGNAVYGMQNNLGSGGAGGAGGMAITANGISVT
PVYGVPKNIVSTSASTTAAAAPSSPVTSDDVFVKDYKFMLLEKDNVPVKKESERLIMSKD
TGKTFTSSTTTTGLSTTFSDDSLKREKKMISGTTETATLSNGVKVAATKDKATYAEIRKD
ESGGGGMGFCSCCTWWKWLLGLLLGLLLLLGLLGGLIALAEEVRSLKARVERLEGGSVSS
AHTSRHSAPSSVNIVDPLDTVQYERTQITRAENTIQLGSEALQPDSPTLQRTVKQLVHSE
LQSETVRATLASSLKGERGEPGTKGDQGSPGIKGDAGFPGVPGPPGPPGHPGQEGARGPK
GSAGEPGHDGPPGQRGREGPTGPRGEPGPPGVGEKGEKGTSGDPGPPGPAGPPGPMGLRG
EVGAPGTVGIPGAPGSQGFRGDAGDPGPKGERGPAGPSGAKGDQGEKGPRGVTGEPGQPG
PIGPPGEKGPKGSAGAPGPDGVKGNRGDQGTTGLPGPRGPAGPPGDAGVPGTPGLQGPPG
LPGTPGQPGSKGEAGEPGRVVTAGSASNTVAIPGPPGPAGVPGPAGPPGLSGPIGPAGLP
GPPGPKGAKGDEGEPGISAKSVERVKFEPVTGLPGPPGPPGPPGREGEPGKPGEGKPGLP
GPAGPPGEPGVGLPGPPGDKGEPGSFVPNSETFFAGPPGPPGPPGPQGFTGEPGHPGLPG
EPGVGFPGPEGPSGSPGPNGLPGPQGPPGPQGPPGSKGDAGVPGAPGIPGYSYGGGRSSP
GPPGPPGPPGPPGSPGDATGSPDMAKQLNDLLRNDGIKEYFTGPPGLPGPPGSVSDVDLA
NRIISYIQREEVRKYLVGPPGPPGAPGIPGLNPQEVAGRVLNLMNEQGILTQSGPPGPPG
PPGLPGAFYSDLPHLLQNADFRGPPGPPGPPGPQGPPGMTGGLVSYAENAQQEPIRAELQ
EYLKSGRVLRDDPSFKESKYSPVETLDYRNIAEQVVNYIKSNGLLLRDFKDFQGPPGPPG
PPGRPGMSHSTYDNMNEIVKMIRDHGVVGPPGIPGQKGEIGHTGPRGQRGPRGEQGIPGL
PGLSGSVGPRGQKGEKGETAYINHRRKRSTGVSYF
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atggacagattaatcacaaccaagattttgaatgcagagggaggatcaggagtttcaggg
aaagagagtgtgaccaccaggacacgtctgacatcccttcctccaaagggcagcagtagt
tcggtgaacactcagcggatgctcacgtctacctctagctctagcttgggttctagttct
ggttctggaggaacggtgcaggtggagaagaggattatcacccagagcagcacaggagga
ggaggaggaggaggaggaggagggagcagcagtaatgtcatatccttaggtggctcaagc
agcagtgtggtgcagggtgcgactggccgcgtgagcggaggatcgtctgtgactccatct
tctctgggaacttctttaagtggagctgctggaggtttgggagcttctggtgtaacctcc
tccatcgttacatttggggtttattcaggaggaggctcaggggcttctgcaaactcctcc
gagtcctggtcttcctctcagtttgtgtccagctcttctggggactgtgggaacctttca
gttggttctatgaatctgtcagggggtgggggtcactcgttagtcatgtcttctggagga
ggggctgttatgtcagcaggaggtggctctaccaaatacaccacctccaccaccactagc
gccatgaagactggtagctactcaccggtcacacagagaaaaagcagcctgaccctgcgc
actgcaggatatgaaggaagctccagtggcaactcctcccctgaatatactaggaaagag
tatgcagctgcagcagcaagtgtagccactagaggacgcacccagacaagagagagtgag
atcagagccagactgcaaagtgcctctccatccactagatggaccgagctggatgatgtg
aagaaacttcttaaaggtcgctccagtagcagcagtcctcccagctctcccaccaataca
ctacccatacctaaaaaagctagtgtggatacacgtatagagagccactcaggttatgac
agcactatcctagagtctgcatacaatggatatggctatcacaccaaccccaacaacctc
agtcccaactctacactacaacacaatggacttcagaacaacctggccttcaacacctca
accatgagcagtgggctttctgctggaaatgcagtgtacgggatgcagaataacttgggc
agtggtggtgctggtggtgctggtggtatggcaatcactgcaaatgggattagtgttact
ccagtatacggagtgccaaagaacatcgtgagcacctcagcttcaacaactgctgcagca
gctcccagcagccctgtcaccagcgatgacgtgtttgttaaggattataagttcatgctg
ctggagaaagacaacgttccagtgaagaaagaaagcgagaggctgatcatgtcaaaagac
acagggaaaacattcacctcctccactaccaccactggactatcaactacgttttcagat
gactcactgaaaagggagaagaagatgatttctggaaccacagaaacagccacattgtca
aatggcgttaaagttgctgcaactaaggacaaagctacatatgcagagattcgtaaagat
gaatctggaggaggtgggatgggattctgctcctgctgtacctggtggaaatggctgctt
ggattgctgttgggattgctcttattgctggggcttctcggtggacttatagctctggcc
gaggaagtacggagcctaaaggctcgtgtggaacgtctggaaggcggctctgtaagttct
gctcacaccagtcgtcattccgcgccatcctctgtaaacatcgtagatccgctcgatacc
gtacaatacgaacgaacccaaataacacgagcagaaaacactatacaactaggatctgag
gcactgcagcctgactctcccacactgcagaggaccgtaaaacaactcgttcactctgaa
ttacagtcagagaccgtcagagccacattggcatcatcactgaaaggagagagaggggag
cctgggaccaaaggtgaccagggatctcctgggattaaaggtgacgcaggatttccagga
gtgccaggtcctcctggtcctccaggtcatccaggacaagaaggtgcaagaggacctaaa
ggaagtgctggtgaaccaggacatgatggcccacctggacagagaggccgtgaagggcca
acaggccccagaggagaaccaggaccacctggagttggcgagaaaggagagaaagggaca
tctggagatcctggacctcctggacctgcaggaccacctggacctatgggactcagaggt
gaagtgggtgctccaggtactgtgggtatcccaggggctcctggatctcaaggcttccgt
ggagatgctggtgatcctggacctaaaggagagagagggcctgcaggaccttctggagct
aaaggtgatcaaggagagaaagggccccgtggagttactggagagccaggacagccagga
cccattgggccaccaggagagaaaggacctaaaggatcagcaggcgcccccgggccagat
ggtgtgaagggaaatcgtggagaccaagggacaactgggttgccaggtcctcgtggacca
gctggacctccaggagatgcaggcgtgccaggaactccagggcttcagggaccaccaggt
ttgccaggaacaccgggtcagcctggatctaaaggtgaagcaggtgaacctggaagagtt
gtcactgcaggctctgcatccaacactgtagctattcctggaccccctggacctgccgga
gttcctgggcctgctggacctcctggactgtctggtcccataggccctgctggtcttcct
ggtccacctggacccaaaggagcaaagggtgatgaaggtgaacccggcatttctgcaaaa
tcggttgaaagagtcaagtttgaacctgttactgggcttcctggtcctcctggcccacct
ggaccccctggaagagaaggagaaccagggaaacctggtgagggcaaacctggcctacca
ggacctgcaggtccacctggagagccaggtgttggtctccctggacctcctggtgacaaa
ggtgaaccaggtagctttgtacccaactcagaaaccttttttgctggaccccccggacct
cccggacctcccggacctcaaggcttcacaggagagcctggacatcctggacttccagga
gaacctggagttggttttccagggcccgaaggcccaagtggatccccaggacccaacggc
ttaccaggccctcaaggcccaccaggtcctcaagggccgccgggttcaaaaggtgatgct
ggtgtccctggagcccctggcatcccaggatattcctatggtggcggcaggagctcacct
ggaccacctggtccacctggacccccagggcctcctggatctcctggtgatgccactggc
tctccagacatggctaagcagcttaatgaccttcttagaaatgatggcattaaggaatat
ttcactggtcctcctgggcttcctggaccacctggaagtgtgtctgatgtcgatttggct
aatcgtattatcagttacatacaaagggaggaggtgaggaagtatctggttggtccccca
ggaccacccggagctccaggtataccaggccttaatcctcaagaagtggctgggagagtc
ctcaatcttatgaacgagcagggtatattgacacaatctggacccccaggcccacctggc
cctccaggacttcctggagcattctacagtgatctcccacatctcctacaaaatgctgat
tttagaggtccacctggacctccaggtcctcctggaccacagggccctcctggaatgaca
ggaggcctggtgtcctatgctgagaacgcacaacaggagccgatccgtgctgaactgcag
gaatatctaaagagtggcagggtgttacgtgatgatccaagctttaaagagagcaaatat
tcgcctgttgagacgttggactaccgcaatattgcagaacaagtggtgaactacatcaaa
tctaacggtttgttgttgcgagatttcaaagattttcaagggccacctggacctcctgga
ccacctggacgtcctggaatgagccacagtacttacgacaacatgaatgagatagttaaa
atgattagagaccatggtgttgttggaccaccaggaatacctgggcagaagggagaaata
ggacatactggtcccagaggacaaagaggtcctagaggtgagcaaggcatccctggtcta
ccaggactttctggcagtgttggaccaagaggacaaaaaggagagaaaggagaaacagcc
tacataaatcacagaagaaagagaagtacaggtgtttcttatttttaa
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