Tachysurus fulvidraco (yellow catfish): 113648758
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Entry
113648758 CDS
T08119
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113648758 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
tfd04515
]
Cadherins
Protocadherins
113648758 (si:ch211-199f5.1)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
113648758
NCBI-ProteinID:
XP_027011896
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Position
18:7842998..7846823
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AA seq
990 aa
AA seq
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MGGNAGCHRWMFFFTLLSLPLLPARAAGRTMKYETYEEDAPGTIIGNLAKDMSLSPSVGS
KTNFRMMKQVNASFVRLRESDGQLTVGEKIDRERICKHSHQCVIAFDVVSFTKDQFKLIH
VEVEVKDINDNAPEFPRKESTLEISENTAAGTRIPLDVAVDEDVGTNYIQSYQISVNSHF
SIDVLSRADGVKYAELVLMKELDRETQALYALELVATDGGSPPRSGITKINVKVKDYNDN
SPIFERNHFSLEIPEDAPVGFLLLDLNAEDPDEGLNGEVVYGLGNQVPSEIKQLFRVDRK
SGRVTLESPMDYESKTTYEFDVQASDLGQSPSPPAICKVVIQVKDVNDNAPEITITPMTS
MAAGVAHVTEAAAKDTFVALISTSDRDSGVNGQVHCTLYGHDHFRLQQAYEDSYMIVTTS
PLDREKIAEYNLTVVAEDLGSPPFRTITQYTVRLTDENDNAPIFSKATYEVSLIENNAPG
AYITTVVARDSDMGQNSKVGYKLAETYVMGSPVSTFVSLDPATGSLYALRSFNYEVLKQL
ELRVHASDSGAPPLHGTATINLRLVDQNDNAPVIVHPVLTNGSADILLPKDAPSGYVTTQ
IKARDADEGINAELSYQMISSEASMLSINKVSGEIYVNREGVYDLGETFKATVTVSDHGK
PSLTSTATIRFTVVAGAPKGDRNLLRNTGNDDEVHEWDMSVVIIVVLAGSCTLLLLAIIL
IATTCNKRKLDKRHDGFGDDKEDDVNLDVEKNNSDPLIPVQCENVFDVQPYSNKPAFNGS
VQAPNDECCSSEDGIDAAYETEDKSHGAKLDGYLTLPGYGKEAVRPITIWKGNSYTTISA
RDPQFSGKDSGKGDSDFNDSDSDISGDGLKKDGHQNSTQDALWACTSECRILGHSDRCWS
PNATRMNSNSRQHLSTFAKTGSLPRDTLRRENYYQAHIPKTVGLQSVYERVLHQEYVIVP
PPQPSRVQDISDVSIPVYSPTTARCSTNEV
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggaatgcaggctgtcaccggtggatgttctttttcaccttgttgtcattgcct
ctgctgccagcgcgagcagcgggaagaaccatgaaatatgaaacgtacgaagaggacgca
ccgggcactattatcggaaacctggccaaggacatgtctttaagtccgtccgtcggctcc
aagactaatttcaggatgatgaagcaggtcaacgcttcttttgttcggcttagagaaagc
gacgggcagctcactgtaggagagaagattgacagagagagaatttgcaagcactctcat
cagtgtgttattgccttcgatgtggtgagttttactaaagaccaattcaaactgatacat
gtcgaggtggaggtgaaggacattaatgacaatgcgcccgagttccccaggaaggagtct
acactggagatttctgaaaacacagcagccggtaccagaatacccctagatgtggctgtg
gatgaagacgtgggcacgaactacatacaaagctaccagatctcagtgaatagtcacttt
agtattgacgtgttgagcagagcggatggggttaaatatgcggagctggtgctaatgaaa
gagctggacagggagacacaggctttatacgcgctggagctcgtggcgacggacggtgga
agtccgcccaggtccggtataaccaagatcaatgtcaaggtgaaggactacaatgacaac
agtcctattttcgagcgcaaccacttttcattagaaataccagaggacgctccagtggga
tttttgcttttggatctcaacgcagaagatcctgatgaaggtttgaacggtgaagttgtg
tacgggctcggtaaccaagtgccctcagagatcaagcaacttttccgcgtagaccggaaa
agcgggcgcgtcacgctcgagagcccgatggattacgagagcaagacgacgtacgagttc
gatgttcaggcgtctgacctgggtcagagtccgagtccgccggccatctgtaaagtggtc
atacaggtgaaagacgtgaacgacaacgcgcctgagatcaccatcacgccgatgacgtcc
atggcggcgggagttgcgcatgtgaccgaggcagccgccaaggacactttcgtggctctt
atcagtacttcagaccgggactcaggagtcaacggccaggtacactgcaccctctatggg
catgatcacttccgtctccagcaggcgtacgaagacagctatatgattgtcaccacatcg
ccgctggatagggaaaaaatagccgagtataacctgacagtcgtggccgaagacctcggc
tcaccaccgttccgcaccatcacacaatacaccgttagactgactgatgaaaatgacaac
gcgcccatattcagcaaagccacctatgaagtgtcacttatagaaaacaacgcaccgggc
gcgtacatcaccacggtagtggcgcgcgactcggatatgggacaaaacagtaaagtgggc
tataagctcgcggaaacctacgtgatgggctcgcccgtgtcaacatttgtctctctagac
cccgccactggctctctttacgcgctgagaagttttaactacgaagttctcaagcagctc
gagctgcgcgtccacgcgagtgactctggcgcgccaccgttgcacggtaccgccaccatc
aacctcagactagtcgatcagaacgacaacgcgcccgttatcgtacatccagtgctcact
aacggctctgcggacattcttctgcctaaagatgccccgtcaggttacgttaccacgcaa
ataaaggcgcgagacgccgacgagggcattaacgctgagctgtcctaccaaatgatctcg
tccgaagccagcatgctttctatcaataaagtgagcggggagatctacgtgaaccgtgaa
ggtgtttatgacctgggcgagacgtttaaagccacggtaaccgtgagcgaccacggtaaa
ccttctctcacgtccacagccacaatccgcttcacggtagttgcaggggctcccaaaggt
gaccgcaacctcctcagaaacactggcaatgatgatgaagttcacgagtgggatatgtcc
gtagtgatcatcgtcgttctggcaggaagctgcacgctgttgcttttagccatcatttta
atagcgaccacatgcaataagcgcaaactagacaagcggcacgacggattcggagatgac
aaggaggacgacgtgaatcttgatgtagagaaaaataacagtgacccactgatcccagtt
caatgtgaaaacgtgtttgacgtacagccttactcaaacaaacctgcttttaacggatcc
gttcaagcgcctaatgatgagtgctgcagctccgaagacggaatcgacgccgcgtatgag
acagaggacaaaagccacggagcaaaattagacggatatttaacactgcctggctatggc
aaagaagctgtaaggccaatcacaatatggaagggcaactcctatacaaccatttcagca
cgagatcctcagttcagtgggaaagacagtggtaaaggggacagcgacttcaacgacagc
gattcagacataagcggagatggcctgaaaaaggatggacaccaaaacagcacccaagat
gctctgtgggcatgcacaagcgagtgtaggatcctcggccattccgaccgctgctggagt
ccaaacgccaccaggatgaacagcaactccagacagcatctgtctacatttgctaagaca
ggctcacttccaagggacacactcagaagagagaactattaccaggcacacattcccaaa
acagtgggcttgcagagtgtttatgaaagagtgttacaccaagagtatgtcatcgttccc
ccacctcagccgagcagagtgcaagatatcagtgatgtctcaatccctgtgtattctccc
actacagcacgttgttccacaaatgaagtctaa
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