Tachysurus fulvidraco (yellow catfish): 113648836
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Entry
113648836 CDS
T08119
Symbol
ddx39aa
Name
(RefSeq) DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113648836 (ddx39aa)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113648836 (ddx39aa)
Spliceosome [BR:
tfd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113648836 (ddx39aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113648836
NCBI-ProteinID:
XP_027012043
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All DBs
Position
18:11725730..11730464
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AA seq
427 aa
AA seq
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MAETDVDNELLDYEEDEEPQVAPESAVVPGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMSNVKCSVFFGGLPIKKDEDVLKKSCPHIVVGTPGRILALIR
NKTLSLKNIKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVARCV
ALSQLLVEQNFPAIAIHRGMVQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKILNDVQDRFEVNVAELPEEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaccgatgttgacaacgagctcctggactatgaggaggatgaggaaccacag
gtagccccagagagtgcagttgtaccaggcaagaaggaggtgaagggatcctacgtgtcc
atccacagctccgggttccgagacttcttgctgaaacccgaactgctccgtgccatcgtc
gactgtggctttgagcatccttctgaagttcaacacgaatgcattccacaagccattctg
ggtatggacatactctgtcaggccaagtctggtatggggaagactgcagtgtttgtgctt
gccacgctacagcagattgagcctgtggatggacaggtctctgtgctggtcatgtgccac
actcgtgagctcgcatttcagatcagcaaagagtatgagcggttttccaagtacatgtcc
aacgtgaagtgctcagtgtttttcggaggtctgccaatcaagaaggatgaagatgtgctg
aagaagagctgccctcacatcgtggtgggcacaccaggccgtatcctcgccctcatccgc
aacaagaccctcagtctcaaaaacatcaaacacttcgttcttgatgagtgtgacaagatg
cttgagcagcttgacatgcgacgggacgtgcaagatatcttcaggctcactcctcatgag
aagcagtgcatgatgttcagtgctacgctcagcaaagagatccggccagtctgtcgcaaa
ttcatgcaagaccccatggaggtgtttgtggacgatgagacgaagctgactctgcacggc
ctgcagcagtattattgcaagttgaaggacagcgaaaagaatcgaaaactctttgaccta
cttgatgtccttgagttcaaccaggtcgtcatcttcgtgaagtcagtagcacgttgtgtt
gcgctctctcagctgcttgtggagcaaaacttccctgccatcgccattcacagaggcatg
gttcaggaggagagattgtcacggtatcagcagtttaaggatttccagaggaggatcctg
gtggcgacaaacctgtttggcagggggatggatattgagcgtgtcaacattgtcttcaac
tacgacatgcctgaagactcggacacttacctacacagggtggcccgtgctggtcgattt
gggaccaaaggtttggccgtcacctttgtgtctgacgagaccgatgctaagatccttaat
gacgtccaggaccgctttgaagtgaacgtagctgaactgccagaggaaatcgatatctct
tcatacattgaacagtccagatga
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