Tachysurus fulvidraco (yellow catfish): 113648838
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Entry
113648838 CDS
T08119
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd02010
ABC transporters
tfd04145
Phagosome
tfd05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113648838
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113648838
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113648838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tfd02000
]
113648838
Enzymes [BR:
tfd01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
113648838
Transporters [BR:
tfd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
113648838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
MFS_1
AAA_30
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
113648838
NCBI-ProteinID:
XP_047658909
LinkDB
All DBs
Position
18:complement(11741589..11746276)
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AA seq
718 aa
AA seq
DB search
MLTFLVAAFAVFTDLVVVYVLDLVGTHLRGKVRSLDGGGDLVRQWTEAVLRCALLCSLFY
CRDVRGRLIKRWVMAHCFITPVYETGRLTLFGNWPMEKFAMWMVGSVAAALGCLFWETLL
PESNEESRGKENKQKARDLFLRVIHLYKPDYLFLFGASLFLALAVLCEMFIPLYTGKLID
ILQTKYSWDEFLSAIILMTFFSFGSSFSAGCRGGLFMCAIGRFICRVKHQLYSCLLKQEI
GFFETTKTGDITSRLSTDTNLMARAVALNVNVLLRTLIKTLGMLYLMFSLSWKLTVLTLM
ETPLTGLLQNIYDTHYQRLSKEMQDSIARANDAAGEAVSGIRTVKSFNAGQSEKSRYDER
LKDTHNIKTRRHTVRIVYLLVRRLAELGAKVAMLYYGRLFVTYGQMTMGNLVSFILYQTS
LAQNIRTLIYIFGDMLNSVSASGKVFEYLDRRPEVSTDGTLKPEELKGHISFQNVTFAYP
TRPDRNVLEDFSLELEPGKMTALVGISGGGKSTTVSLLQRFYQQRDGQILLDGQPLQNYQ
HKYLHNKLVAVGQEPVLFSGTIRDNIAYGLPDCSLEKIEEAARKANAHEFICQFQKGYDT
DVGERGSLLGSSQKQRIAIARALIRQPQVILLDEITSFLDPKSEQMVQQALANSPNQTLL
VIAHRLKTIEKADQIIVIDQGVILEQGSHQELMEKKGHYYKLKEKLFTENNSNNNNSS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttgacatttttggtggctgcttttgctgtattcacggatttggtcgtcgtctatgtg
ctggacctggtgggcacacacttgagaggtaaagtgaggagtttggacggtggaggtgac
ctggtgagacagtggactgaggcggtgttgcgatgcgcgttgctctgctcactgttttac
tgcagggatgtgagagggcggctgataaagcgatgggttatggcccactgttttatcact
cctgtgtatgaaacaggtcgtttgactctgtttggtaactggccgatggaaaagtttgct
atgtggatggtcggcagtgtggctgctgctttgggatgcctcttttgggagacgctctta
ccagagtctaatgaggaaagcagaggcaaagagaacaagcagaaagctcgagatctcttc
ctgagagtgatccacttgtacaaacctgactacctgtttttattcggggcatctctattt
ctagccttagctgtcctttgtgagatgtttattccactctacacaggaaagttgatcgat
atcctgcagactaagtacagctgggatgaatttctctcagcaataatattaatgacattc
ttctcttttggaagttcttttagcgcaggttgtcgaggaggcctgttcatgtgtgctatc
ggcagatttatttgtagggtgaagcatcaactctatagctgcttacttaagcaggaaatt
ggcttctttgagactacaaagacaggtgacatcacgagcagactgtccacagacactaat
ctcatggcccgagctgtagcccttaatgtgaacgtccttctgagaaccctgattaaaact
ctggggatgttgtacttgatgtttagtctctcatggaagctcactgtactgacactgatg
gagacgcctttaactggactactacagaacatctatgacacacattaccagagactctca
aaggagatgcaggactccatagccagagcaaatgatgctgcaggagaggctgtgtcaggc
atcaggaccgtaaagagctttaacgcagggcagagtgagaagagtcgctatgatgagcgg
ctgaaggacacacataatataaagactcggagacacacagtaagaattgtgtacctgctg
gtgaggaggctcgcagaactgggtgcaaaggtggctatgttatactatggtcggctgttt
gtgacatatggacagatgaccatgggaaatctggtctcgttcatcctctaccagacaagt
cttgcccaaaacattaggactttgatttatatatttggagacatgctgaactctgtgagt
gcctctgggaaggtgtttgagtacctagatcgcagacctgaagttagcacagatgggacc
ctgaagccagaggaactgaagggacacatcagcttccagaacgtcaccttcgcatatcca
acacgtcctgaccgcaatgtgcttgaggacttcagtttggagctagaacccggtaaaatg
actgccctggtagggatttctggtggtggaaaaagcaccactgtcagtctgttgcagagg
ttttatcagcaacgggatggacagatcctactagacggacagcctctgcagaactaccag
cacaaatacctgcacaacaagcttgttgctgtgggtcaggagcctgttcttttctccggc
accatacgggacaatatcgcttatggattaccagactgttcactcgagaaaatcgaggaa
gcagcacgcaaagccaatgcacatgaattcatctgccagtttcagaaaggttatgacaca
gatgttggagaacgaggaagtcttcttggtagcagtcagaagcagcgcatcgcgattgct
agagcactaatcagacagccacaggttatattactggatgagatcacaagctttctggat
cctaagagtgaacaaatggtccaacaagccctggccaactcccccaatcagaccttactg
gtgattgcacacagactgaagaccattgagaaggcagaccagattattgtgattgaccag
ggggtaattttggagcaaggcagccaccaggaactcatggagaagaagggacattactac
aaactgaaagaaaaactctttactgaaaataacagtaacaacaataatagcagttaa
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