Tachysurus fulvidraco (yellow catfish): 113648899
Help
Entry
113648899 CDS
T08119
Symbol
cacna1sa
Name
(RefSeq) LOW QUALITY PROTEIN: calcium channel, voltage-dependent, L type, alpha 1S subunit, a
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04010
MAPK signaling pathway
tfd04020
Calcium signaling pathway
tfd04260
Cardiac muscle contraction
tfd04261
Adrenergic signaling in cardiomyocytes
tfd04270
Vascular smooth muscle contraction
tfd04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113648899 (cacna1sa)
04020 Calcium signaling pathway
113648899 (cacna1sa)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
113648899 (cacna1sa)
09153 Circulatory system
04260 Cardiac muscle contraction
113648899 (cacna1sa)
04261 Adrenergic signaling in cardiomyocytes
113648899 (cacna1sa)
04270 Vascular smooth muscle contraction
113648899 (cacna1sa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113648899 (cacna1sa)
Ion channels [BR:
tfd04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113648899 (cacna1sa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
113648899
NCBI-ProteinID:
XP_047661438
LinkDB
All DBs
Position
2:19029893..19053135
Genome browser
AA seq
1777 aa
AA seq
DB search
MEGGGEVPMSSYIMDEETLKRKQKEKLKKLQATGGNPRPARSLLFLTLKNPFRKACISIV
EWKPFEIIILLTIFANCVALAVFMPMPEEDTNNTNSNLESLEYIFLIIFTLECFLKIVAY
GLLFHADAYLRNCWNILDFVIVTMGLFTIVVDFINNISGVEAPVEQKGGGFDMKALRAFR
VLRPLRLVSGVPSLQVVMSSILKSMLPLFHISLLVFFMVTIYAIIGLELFKCKMHKTCHY
EGTDIIATVENEKPSPCAEAGNGRRCVLNGTQCKPGWPGPNNGITHFDNLGFSMLTVYQC
ITTQGWTDILYWVNDAIGMEWPWLYFVSLILLGSFFILNMVLGVLCGEFTKEREKSSRSG
EYQQLRERQQLDEDLKGYMEWITQAEIMDPDQEGQGLLPLQERGSDAESLYELEGLNRLM
YYVRHARRWNRFFRRKCHVWVKSKLFYRLVFLLVFFNTLVIATEHHQQSQSLTDFQESSN
KALLSLFAVEMVMKMYALGLPAYFMSLFNRFDCFVVSVGILELILVHMGVMSNMGISVMR
CIRLLRLIKITKYWTSLSNLVASLLNSVRSIASLLLLLFLFIVIFALLGMQVFGGKFNFP
DQKIRRSNFDNFPQALITVFQILTGEDWNTVMYDGIMAHGGPVMPGILVSIYFIILFICG
NYILLNVFLAIAVDNLAEAESLTSAQKEKAEEKKRKKMLRSKASDKGDEDKAMAKKLAEQ
RAKTEGIPTTARLKVDEFESNVNEIKDPFPPADFPGDDEEEEPEIPTSPRPRPMADLQLK
ETVVPMPEASSFFIFGPQNKFRKLCHRIINATTFTNIILLFILLSSISLAAEDPIDPLSF
RNQVLAYADIVFTSVFTAEIVLKMTTYGAFLHKGSFCRNSFNILDLIVVGVSLLSMGMES
SAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLDFMFACIGV
QLFRGKFYACTDPLKMTEAECRGTFIYYQDNALHEMVMHKRKWINSDLNFDNVLNGMLAL
FTASTFEGWPKLLYKAIDSNKEDVGPVYNNRIGISIFFIVYLILIAFFMMNIFVGFVIVT
FQEQGEQEYKNCELDKNQRQCVQYALKARPLRCYIPKNINQYRVWYIVTSCYFEYLMFLL
IMLNTMCLGMQHCNQSEHITHLSDMLNIIFTVLFTVEMILKVGAFKAKGYFGDPWNVFDF
VIVVGSIVDVILSEINVALAAQGGLYCLTGCEEVNPMQEIADSENMSVSITLFRLFRVMR
LVKLLNRFEGIRNLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALIDGTVINR
NNNFQTFPQAVLLLFRCATGEAWQEVMLGCLYGQRCDPKSDYLPGEEFTCGSGFGVLYFM
SFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGLHHLDEFKKIWAEYDPEATGRIKHLDV
VTLLRRIQPPLGFGKFCPHRVACKRLISMNMPLNSDGTVTFNATLFALVRTGLRIKTEGN
FQQANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFIKRQEE
YYGYRPNKNKKTTNEIQAGLRSIEEEAAPKLQRAISGDLMDDDEMERAIDEAAEHAIYRR
AGGLFGNQMDSFSLQCGGVAHTQVVSQRPLQISDTRAQDTDTAPPVTIHNYTQYNYTQRT
NNNNNSTQSEIHFPACTSQEVQGPATGLLIQEVLDAGGMAXVAADHHFVSVTKEETAAAL
HINMQEMERKAATMLNTPARRKATPLSSCSDVSYVHV
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atggagggtggaggtgaggttcccatgagctcatacatcatggatgaggagacgcttaag
agaaagcagaaggagaaattaaagaagcttcaggcaacaggaggaaaccctcgacctgct
cgctcgctcctcttcctcacactgaagaacccgttccgtaaagcctgcatcagcatcgtg
gaatggaagccatttgagatcatcattcttctaaccatctttgctaactgtgtggctctg
gctgtgtttatgccaatgccagaggaggacacgaacaacaccaacagcaacctggagagt
ttggagtacatctttctcataatcttcacactggagtgtttcctgaagattgtggcatat
ggactgctcttccatgctgatgcatatttacgaaactgctggaacattctggactttgtc
atagtgaccatgggtctcttcactatagtagtggacttcattaataatatcagtggtgtt
gaggctccagtggaacagaaaggtggagggtttgatatgaaagctctcagagcatttagg
gtgctgaggcctttacggctagtctcaggagtcccaagcctgcaggtggtgatgagctcc
attctcaagtccatgctgccactgttccacatctcactgcttgtattcttcatggtgacc
atctatgccatcattggcctcgagctgttcaaatgcaagatgcacaaaacctgccactat
gagggaactgatatcatagccacagtggagaatgaaaagccctctccatgtgctgaggca
ggaaacgggcggcgctgtgttctgaatgggacgcagtgtaaaccaggatggcccgggccc
aataacggcatcacacactttgataatctgggcttctccatgctcactgtgtatcagtgc
atcaccactcagggctggacagacattctctactgggtgaatgacgcaatcggaatggag
tggccatggctctacttcgtcagtctcattctgctgggatcattttttatattaaacatg
gtgctgggagtcctgtgtggtgagttcaccaaggagcgtgagaaaagctctcggagtgga
gagtatcagcagttgcgtgaacgtcagcagctagatgaagatctgaagggttacatggag
tggatcactcaggctgagatcatggaccctgaccaggagggacaaggtctgctgccactg
caggagagaggatcagatgctgagagtctgtatgagttggagggtctaaacagactcatg
tactatgtacgtcatgctcgtcgctggaatcggtttttcaggagaaaatgccacgtctgg
gtgaaatccaagcttttctacaggctcgtctttttgctggtattcttcaacacactggtc
atagccacggagcatcatcaacagtctcagtccctcactgacttccaagagagttcaaat
aaagccctgctgtctctgtttgcggtggagatggtgatgaagatgtacgctcttggcctg
cctgcctatttcatgtctctttttaaccgattcgactgttttgtcgtgtctgtggggatc
ctggagctcatcttggtccacatgggtgtcatgtccaatatgggcatttcagtcatgcgc
tgcattcgcctgctgcgcctcatcaaaatcactaagtactggacatctctcagtaacctg
gtggcttctctgttgaactctgtacgatccatcgcatctctcctgcttctcctttttctc
ttcattgtcatcttcgctctgctcggcatgcaggtgttcggcggaaaattcaacttccct
gaccagaagattagacggagcaactttgacaatttccctcaggcactcatcactgtcttc
cagatcctgacaggggaggactggaacactgtgatgtacgatggtatcatggctcatgga
ggtcctgtgatgcctggcatccttgtcagcatatacttcatcatccttttcatttgtggc
aactatatcctgctgaacgtgttcttggcaattgcagtggataacctggccgaggctgag
agtcttacatctgcccagaaagaaaaggcagaggaaaagaagcgtaaaaagatgctccga
tctaaagcatctgataaaggagatgaagataaagcaatggctaaaaaacttgcagaacag
cgagcaaagacagaagggattccaaccacagccaggctgaaggtggatgagtttgagtcc
aatgtaaacgagattaaagaccctttccccccagctgactttccaggtgatgatgaggag
gaggagcctgagatccccaccagcccgaggcccaggcccatggctgatctgcagctgaag
gagacggtggtgccgatgcccgaggccagctcattcttcatctttgggccacagaacaag
ttcaggaagctgtgccaccgcatcatcaatgctacaacatttaccaacatcattcttctc
ttcatcctgctgagcagcatctctctggcagcggaggaccccattgacccgctgtccttc
agaaaccaggttttggcatatgcagacatcgtcttcacgtctgtcttcacggctgagatc
gtgctgaagatgacaacgtacggtgctttcttacacaaaggatccttctgcaggaactcc
ttcaacattctggacctgatcgtggttggagtatcactgctctccatggggatggagtcc
agtgctatctcagttgtgaagatcctgcgagtgctcagagtcctgagacctttacgagcc
ataaacagagcaaaaggactcaagcatgtggttcagtgtgtgtttgtggccattaagaca
atagggaacattgtgctggtcaccatgctgctggacttcatgttcgcctgcatcggagtt
cagctgttcaggggtaaattttatgcctgcacagatccactcaagatgacagaagcagag
tgcagggggacatttatctattaccaggacaacgctctgcacgagatggtgatgcacaag
aggaagtggattaacagtgacttaaactttgataatgtgctgaatggcatgttggcactt
ttcactgcctccactttcgagggttggccaaagctgctgtataaagccattgattccaat
aaggaggatgttggccctgtgtacaataatcgaattgggatctccatcttctttattgtc
tatctcatcctcatcgccttcttcatgatgaacatttttgttggctttgtgatcgtcacc
ttccaggagcagggggaacaggaatacaagaactgtgagctggacaagaaccagcgccag
tgtgtgcagtacgctctgaaggcccgcccactccgatgctacattcccaaaaacataaat
cagtaccgagtgtggtacattgtgacttcttgctactttgagtacctgatgttccttctc
atcatgctgaacaccatgtgcctggggatgcagcactgtaatcagtcggagcacatcact
cacctgtctgatatgttaaacatcatcttcactgttctcttcaccgtcgagatgatcctt
aaagtcggagccttcaaagccaagggttattttggagacccgtggaatgtgtttgacttt
gtcattgttgttggcagcatcgttgatgtcattctgagtgagattaatgtggccctggct
gcacagggcggtctgtactgtctgactggctgtgaggaagtgaacccgatgcaggagatt
gcagactctgagaacatgagtgtgtccatcacactgttccgtctgttccgtgtgatgcgt
ctggtgaagctgctgaatcgatttgaaggaattcgaaacctactgtggaccttcatcaag
tccttccaggctctaccatatgtagcactgctcatcgtcatgctcttctttatctacgct
gtcataggcatgcaggtgtttgggaagattgcactgattgatggaacagtgattaatcgt
aataataatttccagacatttccacaagctgtgctgctgctgttcaggtgtgctacaggt
gaggcgtggcaggaagtgatgttgggatgtttatatggtcagcgctgtgaccccaaatca
gattatctgccaggggaggagttcacctgcggctcaggattcggcgtcctctatttcatg
agcttctatatgctgtgtgccttcctgatcattaacctttttgtggcggtcatcatggat
aattttgattatctgacacgtgattggtcgatccttgggctacatcatctggatgaattt
aagaaaatctgggcagaatacgaccctgaggccacggggcgtattaaacacctggatgtt
gtaaccctgttgaggagaattcagcctcctctgggctttggcaagttctgccctcaccgc
gttgcctgcaagaggctgatctccatgaacatgcccttaaacagtgatgggactgtgaca
tttaacgccacactgttcgcactcgtgcgcacaggactgcgcatcaaaactgaaggaaat
ttccagcaggctaatgaggagttgcgagccattattaagaaaatctggaagaggacaagc
atgaagctgctggaccaggtcattccacccatcggagatgatgaggtgacagtagggaag
ttttatgctacgttcctgatccaggagcatttcaggaagtttataaagcgacaggaagaa
tattatgggtacagaccaaacaagaataaaaaaaccaccaatgaaattcaggctggcttg
aggagtattgaggaagaagcagctcccaagctacagagagcaatttctggggatctgatg
gatgacgatgagatggagagggcgatagacgaagcagctgaacatgcaatttacaggcgt
gcaggcggcctgttcgggaatcagatggactctttctcactgcagtgtggaggagttgct
cacactcaggttgtgagtcagcgtccactacagatcagtgacaccagagcacaggacaca
gacacagcacctccagttactatacacaactacacacaatacaattacacacaacgcaca
aacaataacaacaacagcacacaaagtgaaatccatttcccagcatgcactagtcaggaa
gtacagggcccagctacaggtctgctcatccaggaggtgttggacgcagggggcatggct
nntgtcgctgctgatcatcattttgttagtgtgacgaaggaggaaacagctgcagctctg
catataaacatgcaagaaatggagagaaaagcagcaaccatgttgaacacacctgcaagg
agaaaagccacgcccctttccagctgttctgatgtctcatatgttcatgtgtga
DBGET
integrated database retrieval system
