KEGG   Tachysurus fulvidraco (yellow catfish): 113648924
Entry
113648924         CDS       T08119                                 
Name
(RefSeq) probable ribonuclease ZC3H12C
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tfd03019]
    113648924
Messenger RNA biogenesis [BR:tfd03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     113648924
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6 zf-CCCH_4 UBA_N4BP1_C zf-CCCH_2 Omega-toxin
Other DBs
NCBI-GeneID: 113648924
NCBI-ProteinID: XP_027012252
LinkDB
Position
18:complement(9084918..9108150)
AA seq 861 aa
MGLKDHLDDGEGHILDLGLDLDYLHVKAGDRQAGADARCRMDRGLLDTNEEGAPSSGRCL
SSSRGDSEDSCGSDGEVEQSCTLAPSDGSARAVHPPLCRSPCLDLDSPGLPEVTQDNPNT
ENSLREYQTKLEFALKLGYAEDLVRLVLSKLGSDALINDILGELVKLGSKSDSDSSAATS
SISTTSSLASSGSLSSSACSFSDSTDSRRSESPSQSILDDKDNLRPIVVDGSNVAMSHGN
KEVFSCQGIQLAVDWFLERGHKDITVFVPAWRKEQSRPDALITDQEILRRLEKDKILVFT
PSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLAVEKPEWKKFIDERLLMYSFVN
DKFMPPDDPLGRHGPSLENFLRKRPIIPEHKKQPCPYGKKCTYGHKCKFYHPERGTQPQR
AVADELRASAKTSAAKGTNESGLVKSHSVPGGSRNDKASDGKRSHSKRQSDSSVRTLSYS
DVEDKLSAKTKADPQNSSLTLPPAPGGPPSCNTHTQDQREQLTCFSKSHAVPAFPQTDSY
PTCESPDLSYYSLVRGYSGLSLSSQRSPERPFLSDMDTRLSSVASDCSSEGSASSDSYGT
VPPGERSCMSSPDSLLDDGLKCHHYHHLHHHRRQYPMPMVLNPPPHHHQSRVLSPVPSNH
PGFHHGMARGHSFTQDDQPLESHFKHSVSYIGQQVQHQMIGARSSCPGEYPPQNSPLRRG
LASTRLDSVSDSRLYERSPLMAREPFQDQDRMASWEPYYQQPCYEPFTFQSLPENRQQAW
RVPWGQSPLHPSPPHPSHTPHQNQEPPALSRYQELREKVFINLCNIFPTELVRLVMGRYP
HITDAQQLAAAILAEKSQTGY
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgggcctgaaggaccatctggatgatggagaaggccacatcctcgacctggggctggat
ctggactacctgcatgtgaaggctggagaccggcaggccggtgcagatgcccgttgcaga
atggacaggggcttattggacaccaacgaggaaggagcgcccagctctgggagatgtctt
tcttcgtcccggggtgattcagaagacagctgtggatctgatggtgaggtggagcagagc
tgtactcttgctccaagcgatggatccgctcgagctgtgcatccgcctctttgccgctct
ccatgtctggatctggactccccagggctgccggaagtgacacaggataacccaaacact
gaaaattctctaagggagtaccagaccaagttggaatttgccctgaagctgggttatgct
gaggacttggtccgattggtgttaagcaagcttgggtcagatgcgctgatcaacgacatc
ctaggggagttggtgaaacttggcagcaagtcagacagcgacagtagtgcggcgacctca
tccatttccactacttcatctttagcgtcttccgggtcattgtcttcttcagcatgtagc
ttctcagactctaccgattcacgacgctccgagtcaccgtcacagtcaatcctggatgac
aaggataaccttcgccccatagttgtggatggaagcaatgtagccatgagccatggcaac
aaggaggtattttcctgccaaggtatacagcttgcagtggactggttccttgaacgtggc
cacaaagacattacagtgtttgtaccagcttggaggaaagagcagtcccgacccgacgct
ctcatcacagatcaagagatcctgagacgtctcgagaaggacaaaatcctggtattcaca
ccttctcggcgcgtccaggggcgtagggtggtgtgctatgatgaccggttcatcgtcaag
ttggcttacgaatcagacggcatcatcgtctccaatgacaactacagggatttggccgtg
gaaaaaccagaatggaagaagtttatcgatgaacgacttctcatgtactcctttgtcaac
gataagttcatgcctcctgatgatccccttggtcgccacggccctagcctcgagaacttc
ctgagaaaaaggcccatcatcccagaacacaaaaaacagccgtgtccatatggaaagaag
tgcacttatggtcacaagtgcaagttctaccacccagagcgtggcacccagccccagcgt
gctgtagctgatgagcttcgtgctagtgccaagacctctgcagctaaaggcacaaatgag
tctggtctagtgaaaagtcacagtgttcctggaggctctcgcaatgataaagccagcgat
ggaaaacgttcacactcgaagcggcagtcagactccagtgtccgcaccctttcttacagt
gatgtcgaggacaagctgagcgccaaaaccaaagcagacccccagaacagcagcttgaca
ctaccccctgcaccaggtgggcccccttcctgcaacactcacacacaagatcagagagag
caactgacatgcttttccaaaagccatgcagtgccagctttccctcaaacagactcctac
cccacctgtgagtctccggacctcagctactattcccttgtccgtggctactctggcctc
agcttgtcctcccaaaggagtccagagcggcctttcctgtctgacatggatacacggctc
agttccgtggcatctgactgcagcagtgagggcagcgccagctctgattcgtatggcacg
gtgcctcctggtgagcggtcctgtatgagctcacctgactcactgttggatgatgggctc
aagtgtcatcattaccaccacctgcatcaccaccgcaggcagtacccgatgcccatggtc
ctgaacccaccaccccaccaccaccagagtcgtgtgctttcaccagtaccttcgaatcac
cccgggttccatcacgggatggcccgcggacacagcttcactcaagacgaccagcctctg
gagtcccactttaagcactctgtgtcctacattgggcaacaagtccaacaccagatgatt
ggcgccagatcaagttgtcctggggagtaccctccacagaattccccactgcgtcgaggc
ctagcatccacacgactcgacagtgtgtctgactccaggctctatgagcgctcacctctt
atggccagggaacccttccaagaccaggacaggatggccagctgggagccatactatcag
caaccctgctatgagcccttcacgtttcagagccttccagaaaacaggcagcaagcatgg
cgggtaccttggggacaatctcctcttcatccttctcctcctcatccatcccatactccc
caccagaaccaggaaccacctgccctcagtcgctaccaggaattgcgggaaaaagtgttc
atcaacctgtgcaacatcttccccacagagcttgtgcgtctggtcatgggccgatatcca
catattaccgatgcccaacagctagcagccgcaatcttggctgaaaagagccagactgga
tactaa

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