Tachysurus fulvidraco (yellow catfish): 113649049
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Entry
113649049 CDS
T08119
Symbol
grin2bb
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04020
Calcium signaling pathway
tfd04080
Neuroactive ligand-receptor interaction
tfd04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113649049 (grin2bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113649049 (grin2bb)
04082 Neuroactive ligand signaling
113649049 (grin2bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113649049 (grin2bb)
Ion channels [BR:
tfd04040
]
Ligand-gated channels
Glutamate (ionotropic)
113649049 (grin2bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
113649049
NCBI-ProteinID:
XP_027012436
LinkDB
All DBs
Position
18:11531400..11631011
Genome browser
AA seq
1756 aa
AA seq
DB search
MAVGLAMFKGLRLHFTAMLVSLSLFPSFRRTLSTPSVLPSPSRLSLLFFVLLLTLLPACE
SRRGGGGMAGGVATGNIIGPPHYSPPNPVASVPKLAQGLSIAVVLVGNSSEVVLAEGLEK
EDFLHVPLAPKLDLVTMNETDPKSIITRICALMSRHWLQGVVFGDDTDHEAIAQILDFIS
AQTHIPILGIRGGSSMIMAAKDDNSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYY
PGYQDFVNRIRSTVENSFVGWELEEVLLLDMSEDDGDSKIQNQMKKLQSPVILLYCTKEE
ASTIFEVAHSVGLTGYGYTWIVPALVAGDADIVPNVYPTGLISVSYDEWDYGLEARVRDA
VAIIAMATSTMMLDRGPHTLLKSGCHGAPEKKGPKGGNPNEVLRYLMNVTFEGRNLSFSE
DGYQMHPKLVIILLDKQRQWDRVGKWENGSLTMKYHVWPRFELYSDAEERDDDHLSIVTL
EEAPFVIVEDVDPLSGTCMRNTVPCRKQLKAQNQTGDSGIYIKRCCKGFCIDILKKIAKS
VKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTINEERSEVIDFSVPFIE
TGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLAD
GREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLA
AFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYKEMHSYMTSFHQ
KNVDEALHSLKSGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIAIQKDSG
WKRPVDLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDVDNMAGVFYMLGAAMAL
SLITFIAEHLFYWQLRFCFMGVCTGKPGITFSISRGIYSCIHGVQIEENKSGLNSPSATM
NMNMNNTHSNILRLLRTAKNMTSVPGVNGSPHSALDYGHRESTVYDISEHRRSLAGHSDC
KPPPPYLPEDNMFSDYVSDVERTFGNMHLKDSNLYQDHYLHHHGGTGSGLALGMSGPLPN
RPRSLGSASSLEGGMYDCDSLGGGVAPIFTTQPRQSLTHRNREKFDLIAGHPTQSSFKSG
LPDLYGKFSFKGGASSSGFIAGHDRYCGGGGAGSGGDDGNIRSDVSDISTHTVTYGNLEG
NAKRRKQYRDSLKKRPASAKSRREQDEIELGFRRRTHHTIHHHHHHHPVTQGHRSATPPV
ERKSLRGGNTAYMFRDKDNLRDFYIDQFRSKEGASQWEHLDLSDTPGMGGGGGLGGGGCG
GIVSSGGGGGACTSLVPVDDFLKGKSKKTECKGGVGGSPGQQGHACWEKNIGGVGGLAGG
DWECRNCHSGGNKPVCMHGGGGGVGGSSGGGGGSGQASSRPSSATCKRCDSCKKPGNLYD
ISEDNHLLLDQIGSKFPLEGGKGGGGGGGAQTQVQRRKFGPGGRVLRRQHSYDTFVDLQK
EGTGRMGGSGGFGGASMLPQPRSVSLKDKDRYMEGASPYAQMFERYMGGERETTFISGGD
RGKGGGSSFNLFRGGEGGLHRRSVGEKDMRDRDRGMMGGGMGGTRGVGTYSLSKSLYPDK
VNQNPFIPTFGDDQCLLHGAKSYYVKKQQAQPQQQQTQQQQQLLNNNNRADFRGSMGVTS
YLPASASAGVLSNVGPRFPKELCLGGPLSNHHGGAAGNNKLLSARDGLGMGQGQRPFNGS
SNGHVYEKLSSIESDV
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgggctggcaatgttcaagggactgcgtcttcacttcactgccatgcttgtc
agcctcagcctctttccctccttccgccgtaccctctccacgccctcggtcctcccttca
ccttccagactctctcttctgttttttgtgctcctcctgacgttgctcccagcttgcgag
tcacgacggggcggtggaggcatggctgggggtgtggccactggcaacatcattgggcct
ccccattactcaccaccaaatccggtggcatcagtgcccaagttggcgcagggccttagc
attgccgtggtgcttgtgggcaactcgagtgaggtggtgctggctgaaggcctggagaag
gaggatttcctgcatgtaccgctggcacccaagctcgacctggtcaccatgaatgaaact
gacccaaaaagcatcatcacgcgcatatgtgcgctcatgtcccgccactggctccagggt
gttgtgtttggagatgacaccgaccatgaggccatcgcccagatccttgacttcatctca
gcgcagacccacatcccaatcctgggcatccgtggaggctcctccatgatcatggctgcc
aaggacgacaactccatgttcttccagttcgggccgtctatagagcagcaggcctccgtc
atgctcaacatcatggaggagtacgactggtacatcttctccatcgtcactacctactac
cccggataccaggacttcgtcaacaggatccggagtaccgtagagaatagctttgtgggc
tgggagctggaggaggtgttgctgctcgatatgtcagaggacgatggcgactctaagatt
cagaaccagatgaagaagctccagagccctgttatactgctctactgcactaaagaagaa
gccagcaccatttttgaggtggcacactctgtaggcctcactggatatggttacacctgg
attgtaccagcgctggtcgcgggggacgccgatattgtgcccaatgtctatcctacaggt
ctgatctcagtgtcttatgatgagtgggactatggactggaggcccgtgtgcgtgatgcc
gtggcaatcatcgccatggcaacctccactatgatgttggacagaggtccccacacactg
ctgaagtcaggttgccacggtgcacctgaaaagaaaggcccgaagggggggaatcccaac
gaagtcctgagatacctcatgaacgtgacattcgaggggcgcaatctctccttcagcgag
gatggctaccaaatgcaccctaagctggttattattttgctggataagcagagacagtgg
gacagggtgggtaagtgggagaatggttcgctgaccatgaagtaccatgtgtggccacgc
tttgagctctattcagacgcagaagaaagggatgatgaccacctgtctatcgtcacactg
gaggaggccccgtttgtcatcgtggaggatgtggaccccctcagcggcacctgcatgagg
aacacggttccctgcagaaaacagctcaaagcccaaaaccaaacaggagattcagggatc
tatatcaagcgctgttgcaagggcttctgcatagacatcctcaaaaagatcgctaaatct
gtgaagttcacctacgacctctacctagtgaccaacgggaaacacggcaagaagatcaat
ggcacgtggaacggcatggtgggcgaggtggtgttaaagaacgctcacatggcagtaggc
tctctgaccatcaacgaggagaggtcagaggtcattgacttctccgttcccttcatagag
acgggcattagtgtcatggtctcacgtagcaatggcaccgtgtctccttctgcatttcta
gagcccttcagtgctgatgtgtgggtgatgatgtttgtgatgctgcttatcgtatctgct
gttgccgtctttgtcttcgagtacttcagtccagtcggctataaccgatgtctggcggat
ggacgagagcctggtggtccctcgttcacaattgggaaggccatatggctgctctggggt
ttagtcttcaacaactctgtgcctgtacaaaaccccaaaggcaccaccagtaagataatg
gtatcagtgtgggccttcttcgctgtcatcttcctggccagttacactgccaacctggct
gccttcatgatccaagaggaatacgttgaccaggtgtctggcctcagcgataagaagttc
caacggccaaatgacttttctccgccgtttcgttttggcacggttcccaatggcagcacg
gagaggaacattaggaataactacaaagagatgcacagctacatgaccagcttccaccag
aaaaatgtagacgaggccctccatagcctgaaatctggaaaattggatgcatttatctat
gatgctgctgtgttgaactacatggcaggcagagatgagggctgcaagcttgtgacaatc
ggtagtggttatatctttgctactacaggctacggtatcgccatccagaaggattcaggg
tggaagagacctgtggaccttgccattctgcagctgtttggagatggtgagatggaagag
ctggaggcattgtggttgactgggatttgtcacaatgagaagaacgaggtgatgagcagc
cagctggatgttgacaacatggctggtgtcttctacatgctgggggcggccatggcgttg
tcgctcatcaccttcatagctgagcacctgttctactggcagctacgcttctgctttatg
ggcgtgtgtacgggcaagcctggcatcaccttctctattagcaggggcatctacagctgc
atccatggtgttcagatcgaggagaacaaatcaggcctcaactctccgtcagccaccatg
aacatgaacatgaacaacacccactccaacattcttcgcttgctgcgcacagccaaaaac
atgacctctgtgcctggggtcaatggctccccccacagtgccctggactatggtcaccgt
gagtcaactgtctacgacatcagtgagcatcgacgcagtctggcagggcacagtgactgc
aagcccccacctccatatctgccagaagataatatgttcagcgactatgtgagtgatgtg
gagaggacttttgggaacatgcacctgaaggacagtaacctctaccaggatcattacctg
caccaccatgggggcacgggatccggactggctctgggtatgtcgggtcccttgcctaac
cgacctcgtagcttaggcagtgccagctcgttggagggagggatgtacgattgtgacagt
ttagggggaggggtagcgcctattttcaccacccagccccgccagtcactgacacacagg
aacagggaaaagtttgacttgattgcaggtcaccccacccagtcgagcttcaagtctggc
ctgcctgatctatatgggaagttttccttcaaaggtggggcatccagttcaggttttatt
gcgggacatgacaggtactgtgggggaggaggggcgggctcgggaggggacgacggaaat
attcgttctgatgtgtccgatatttcaactcacaccgtgacgtatgggaatcttgagggc
aatgctaagcgacgcaagcagtacagagacagcctgaaaaaaagaccagcatctgctaag
tcacgcagagagcaggatgaaattgagctgggcttccggaggcgcacccaccacaccatc
caccaccaccaccaccatcatcctgttacacaagggcaccgttcagctactccacctgtg
gaacgaaagagcctgagagggggcaacactgcatacatgttccgtgacaaagataatctg
agggacttctacatagaccagttccgatccaaggaaggggcatcccaatgggaacacttg
gatttgagtgacactcctggaatgggtggcggagggggtctgggtgggggcggatgtggc
ggcatagtcagcagtggtggtggcgggggagcgtgcactagtttggttcctgtggacgat
ttcttgaaaggtaaatccaagaagacagagtgtaagggtggagtgggaggatctcctggg
cagcagggccatgcatgctgggaaaagaacattggaggggtggggggtttggctggaggg
gattgggaatgccgtaactgccatagtggaggcaacaagcctgtttgcatgcatggggga
ggagggggtgtagggggatcaagtggaggaggtgggggtagtggacaagcttccagccgg
ccaagctcagctacttgcaagcgatgcgattcatgcaagaagcctggcaacttatatgac
atcagtgaggacaaccacctcctcctggatcagatagggagcaagttccctctggaaggt
gggaagggaggtggtggaggtggaggggcccaaacccaggtgcagaggcgtaagtttggc
ccagggggcagggtgttgcgtaggcagcattcctatgacacatttgtagacctgcagaaa
gaagggacgggtaggatgggaggctctggagggtttggaggagcatctatgcttcctcaa
ccccggagtgtgagcctgaaagacaaagatcgctacatggaaggtgcgagcccatatgcc
caaatgtttgagcggtacatgggaggtgagcgggagactacgtttattagtggtggggac
cgggggaaaggaggtggatcttcgtttaatttattccgtgggggtgagggtgggttgcac
cgtcgctcagtaggtgaaaaagacatgagggacagggatagaggcatgatgggaggaggt
atgggaggtacccgaggggttgggacttactccttgtctaaatctctctacccagataag
gtgaaccagaacccattcatcccaaccttcggcgatgaccagtgcctattacatggcgcc
aaatcgtactacgtcaaaaagcagcaggcacagccacagcagcaacagacgcaacagcag
caacagctcctcaacaacaacaaccgggcagacttccgcggctccatgggggtgacttct
tatttgccagcctctgcctctgccggggttttgtccaacgtgggaccccgttttcccaag
gagctgtgcctgggtgggccccttagcaaccaccatggaggggcagcaggcaacaacaag
ctgctgtcagcaagggacgggttagggatggggcaaggacagagacctttcaatggctca
agtaacggacatgtatatgagaagctgtccagcattgaatctgatgtctga
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integrated database retrieval system
