Tachysurus fulvidraco (yellow catfish): 113649062
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Entry
113649062 CDS
T08119
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113649062
Membrane trafficking [BR:
tfd04131
]
Protein recycling
Others
Others
113649062
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
ATLF
PSII_BNR
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
113649062
NCBI-ProteinID:
XP_027012468
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All DBs
Position
18:9559467..9771945
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AA seq
1212 aa
AA seq
DB search
MRRGNGFVLVWHGLSCALFMLRFGMLVEADISCRFCQPLGKWRPRQLVLNMDAPVIATGE
VGGRGQVFGFEHDFANEPEGECMSLSRRKRNSRAQESLETVRGTRKSSLTGNEPNKPNAH
SARHGAILKPHQKQGARRTRRDATRSRDDPKSPRARDERSLRWSKDELQLTSSTFALSGD
SAHNQAMVHWSGQNSSVILMLTKLYDFNLGSVTESSLWRSTDYGTTYEKLNEKVGVKTIL
SYLYVSPNNKRKIMLLTDPEVENSLLISTDEGATYQKYRLGFYVLSLLFHPEQEDWILAY
SHDQKLYSSVEFGRRWQLVHERVAPNRFYWSKMGLDKEPGLIHLETTISETQALYITCKL
QNCTEANKGKPFPGYIDPNSLVVQDEYVFVQVSTGGRPIYYVSSRRELFTPMKLPKYTLP
KDLHVISTDENRVVAAVQEWNQNDTYNLYVSEAGGVYYTLALENVMSSMGPEGNVMIELY
EVAGIKGMFLANKKLDDQVKTYITYNKGRDWRLLQAPSTDLRGNSIHCILPYCSLHLQLH
VSANPYTSGNIASKDSAPGIIVASGSIGAELNSNNVSIFITSDAGNTWRQIFDEEYSILY
LDQGGALVAIQHTPLPIRHLWLSFDEGRVWNKYSFTSSPLFVDGVLGEPGEETLIMTIFG
HVSHRSEWQLVKIDFRSIFNRRCTEADYQTWHLHNQGEPCLMGVKRIYRKLKPMAKCVMG
KAQSVTVTSDPCECTESDFECDYGYERRTDGRCTPAFWFHPSSMSRSCITGHTFLNSTGY
RKVVYNNCTGGVVDLYMARRRPCPSQAPKGLHLVTSEGKLTATLGHNVTFLVFLEQGDGS
RTSITLDFGDGHAITYSNVSSIEDGIKHIYKSVGIYRVTATAENSLGFETAVLFLHVTCQ
LEYIHLSAPFVAVKNKEVNLTVVLWPSQVGTVTYIWWFGNNSEPIITLEGSVAFTFPREG
INVVTVQVVAGNTIQQDRKTIAVHEYFRSHLLAFSSNLDEHNPDVAEWRLDVSRVIKNSM
VHVTGVNPEHLLVTVLPGLPTAAEFFLLPDKELTEGKADKTVTHLDQLSELVLNALNQNQ
VQFTLRPGVQITVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVLGLAVFLIYKFKRKIPG
LHLYAAMQNEKEQEMIRSPASPVENEPSISSQRDLPSSPESLDTELNVNTIECIKPHPRV
RISTEPPVYIDV
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgcggagagggaacggattcgttttggtttggcacgggctttcatgcgccctgtttatg
ctccgtttcgggatgctggtcgaggcggacataagttgcaggttttgtcagcctttgggg
aagtggcgcccgaggcagcttgtgctcaacatggacgcaccggttattgcaacaggagaa
gttggaggacgcggacaggttttcggctttgagcacgactttgcaaatgagcccgagggt
gaatgcatgagtttgtcaaggcgcaaacggaatagccgcgcgcaagaatcactggagaca
gtgcggggcaccaggaagtccagtttaaccggtaacgaaccaaacaaacccaatgcacac
agcgcgcgccatggtgcgatccttaaaccgcatcagaaacaaggtgcacgcagaacgcgc
cgggacgcaacaagatcccgggatgatcctaaatcaccacgagctcgagatgaaaggtca
ctcaggtggagtaaagatgagttacaactaaccagctccacgttcgccctgagcggagac
tcggctcacaaccaagccatggtgcactggtccggccagaacagcagcgtaattctcatg
ctgaccaagctgtacgacttcaaccttggcagtgtcactgagagctccctgtggaggtca
actgactacggaaccacttacgagaagcttaatgagaaagtcggggtgaaaaccattctt
agttacttgtacgtcagcccaaataacaagcgaaagatcatgctgctgacagacccggag
gtggagaacagtctgctgatcagcacggatgaaggagccacgtatcagaaataccgcctt
ggcttctatgtgctcagcctgcttttccatcctgagcaggaggattggattctcgcctac
agccacgatcagaagctttacagctccgtcgagtttggacgacggtggcagctggttcat
gaaagggttgcgccgaatcgattctactggtctaaaatgggtctggataaagaaccgggg
ctgattcacctggagactaccatttccgagacacaggctctgtatatcacctgcaagctg
cagaactgtacggaggccaacaagggcaaacctttccccggctacatcgaccccaattct
ctggtggtgcaggacgagtatgtgtttgtgcaggtgtcgacaggcggtcggccaatctac
tacgtgtcatcaaggcgagagctgttcacaccgatgaagctacccaaatacacgcttcca
aaggacttgcacgtgatcagcacggatgaaaaccgtgtggtggcagcggttcaggagtgg
aatcagaacgacacttataacctgtacgtctcagaggccggaggagtgtattacacactc
gctttggagaatgttatgagcagcatgggacctgagggcaatgttatgatcgagctatat
gaggtagcaggaattaaagggatgtttctggccaacaagaaattagatgaccaagtaaag
acatacatcacgtacaataaaggaagagactggagactgctgcaggcgccctctactgat
ctacgagggaacagcatccactgcattttgccgtactgttccctacatctgcaactccac
gtgtcggccaacccttatacgtctggaaatatcgccagcaaagattcagcaccgggaatc
atagtggcatcaggttccataggtgcagagctgaatagtaataacgttagcatatttatc
acatctgacgctggaaacacatggaggcagatatttgacgaggaatacagcatcctatac
ctggaccaaggaggtgcactagtggctatccaacacactcctctccctatcagacactta
tggttgagttttgatgagggccgggtatggaataaatatagctttacatcttccccgctg
tttgtggatggagttttgggcgagccaggggaagagacgcttattatgacaattttcggg
catgtcagtcatcggtctgaatggcagctggtgaagatcgacttcaggtctatatttaac
aggcgttgcactgaagcagactatcagacttggcacctccataaccagggcgaaccttgc
ctcatgggtgtgaagaggatctatcggaagctgaagccaatggccaagtgtgttatgggt
aaggcccaatcagtcacggtgacttcggacccatgtgagtgcacagagtctgattttgaa
tgtgattatggctatgagcggagaacagatgggcgatgtacaccagcattttggtttcat
ccctcttccatgtccaggagctgcattacaggccacactttcctcaacagtactggatac
agaaaggtggtctataataattgcactggaggtgtggtggatttgtacatggcccgtagg
cgaccctgccccagccaggcccctaaaggcctccacctggtcaccagcgagggaaaactc
acagctacactgggccacaatgtcaccttcctcgttttcctagagcagggtgacggatca
aggacgagcatcacgttagatttcggcgacggacatgcgatcacgtactccaacgtgagc
tctatcgaggatggaatcaaacacatctacaagagcgtggggatctacagagtgaccgct
acagctgagaacagcctggggttcgagacggcagttcttttcttacacgttacatgtcag
ctggagtatatccatctctctgcgccgtttgtggcagtgaaaaataaggaagtcaacctg
acagtggttctgtggccgagccaagtgggaactgtcacctacatctggtggtttgggaac
aactcagagccaataatcacactggaagggagcgtggctttcactttccctcgggaggga
ataaatgtcgtcaccgtgcaggtggtagccgggaacactattcagcaagacaggaaaacc
atcgcagtgcatgaatatttcaggtctcatcttttagccttttcctccaatctggatgag
cacaaccctgatgtggcagaatggaggctggatgttagcagagtcatcaaaaactccatg
gtccatgtgactggagtgaatccagagcatctgctggtcactgttttgccaggactgccc
acagccgctgaattcttcctgctcccagataaagagctaacagaggggaaagcggacaaa
acagtaacacatttagaccagctctcagagttggttttgaacgcgctgaaccagaaccag
gttcagttcacattaagacccggagttcagatcacagtctacgctgcacatttatctgca
gcacctctagtggacaccagcgagaatcacagcggctcggccatgctcatgcttctctca
gtggtggtattgggtttagcagtgttcctcatctataaattcaaaaggaagatcccaggc
ctccacctctatgcagcgatgcagaacgaaaaagagcaagaaatgatccggagcccagcg
agcccagtggagaacgagccaagcatcagctctcagagagatcttccctcctcgccggag
tctctggacacagagcttaacgtcaacaccattgaatgcattaagcctcatccacgtgtc
agaatctcaacagaacctcctgtctacattgacgtctga
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