KEGG   Tachysurus fulvidraco (yellow catfish): 113649080
Entry
113649080         CDS       T08119                                 
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113649080 (ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tfd03019]
    113649080 (ndc1)
Messenger RNA biogenesis [BR:tfd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113649080 (ndc1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 113649080
NCBI-ProteinID: XP_027012489
LinkDB
Position
11:23978890..23990683
AA seq 670 aa
MFSFSQSCWFIRKVVRWRAVASIGWSVLLLPPITCVLIMFIRLNVFHPTNWLSGCLGLLT
EASTLFSMFLLCAAVILIAFFNLQYYTVIPSIPCSRVALLAEVLHPRQCVHSLVHCAVGM
LVMWCVCVMAGGRYHTLHIYRTHSESGGVVVCLNEYHVFMLLAGAFMGYSHSLLGVVQNI
HYVSFHIIQQYKYMRFKSSVWWLVKCSAVQSLYSVRNYIILYFLFGRIPRTWIANTLNVH
VDSSVRSLDSFAGLCDVSLFYQLWISGTFLLLTWYLSVLLFRIYITEPYSFLVQSSFSED
TEECLPKVLTEQNVLVMKFLALQDLALLSQHSPSRRQEVFSLSQPGGHPHNWNAISKECV
SLLSELTQRLIAHHDAVASNGRAKPSSERNDTRSSSSSCSVTSGTEDLSDSPRRSALIRT
PGSVFGSAVKGVASPLTAPFTPDLTAPFSSPALRPLLSPQVVHRPWLGSVQSPHVTRRNP
KLWSTSTESQTNGNQPPSPDPSPKPAGEHKPSFLSQWLQNRKEQVKGFLAKRVLVVYLFN
KLPEASSRALFADSQAHIWALEGLSHLVAASYSEDKYGVVQTTLPSILSNMLSLQEAVDR
HFKLPHASSKPGKTSYSLGDSTYKTLRFALRATLKTAIYRITTTFKEHLQSVSIPAEQQK
RLQQFLEYKE
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgttttccttcagtcagagctgctggtttatacggaaggtggtgagatggagagctgta
gccagtataggctggtcagtgctgcttctgcctcccatcacctgtgtgctcatcatgttc
atcagactcaatgtgtttcaccccacaaactggctttcaggatgtttgggtttgctgaca
gaggccagtacactgttctccatgttcctgctctgtgcagccgttattctcatcgccttc
tttaacctgcagtattacacggtcattccctccatcccttgttcccgtgtggctctgctg
gctgaagtgcttcaccctcgtcagtgtgttcactcactagtgcactgcgcagtcgggatg
ctggtgatgtggtgtgtgtgtgtcatggctggaggacgctatcacacactccacatttat
cgcactcacagtgagagtggcggtgttgtcgtttgcctgaacgagtatcacgtgttcatg
ctgctggccggagcgttcatgggatactctcacagtttactgggcgtcgtccaaaacatc
cactacgtctcctttcacattatccagcaatataagtacatgcgctttaaaagctctgtc
tggtggctggtgaagtgcagcgctgttcagtctttatattcagttaggaattacatcatt
ctctacttcctgtttggacgcatcccgaggacgtggatcgccaacacactgaatgttcat
gtggacagctctgtgcgctctctggactcgtttgcaggactgtgtgacgtgtcgttgttc
tatcagctgtggatcagtggaacgttcctgctgctcacctggtacctgagcgtgctgctc
ttcaggatctacatcactgagccgtacagttttctggtgcagtcgtcgttctctgaggac
acagaagaatgtctccctaaagtcctgactgaacagaatgtcttggtcatgaagtttctg
gcgttgcaggatttggcgttgctttcccagcattccccttcacgcagacaggaagtcttc
agcctcagtcagccaggtggtcatcctcacaattggaacgctatcagtaaggagtgtgtc
tcgttgctgagtgaattaacacagcgtctcatcgcgcatcacgatgccgtggcgtctaac
ggcagagcgaaaccttcatctgagagaaatgacaccagatcgagctcctcatcctgctcg
gtgacgtcagggaccgaggatctttccgactctcctcgccgcagcgctctgattcggact
cctggctctgtgtttggttctgcagtgaagggtgtggcctcgcccctgaccgcaccgttc
acacctgacctgacagcaccgttctccagccccgccctcagacccctgctcagcccacag
gtggtccacagaccctggttgggctcggtccagagtcctcacgtcacccggaggaacccc
aaactgtggagcacgtccaccgaatcgcagaccaatgggaaccaaccgccgtctcctgat
ccctcccccaaaccagcaggcgaacacaaacccagctttctgtctcagtggctacagaac
aggaaggaacaggtgaaaggtttcttggcaaagcgagtgctggttgtgtatttatttaat
aagctgcccgaggcgtcgagtcgagccctgttcgctgatagccaggcgcacatctgggct
ctggaaggattgtctcatctggtagctgcttcatattctgaggataaatacggagtggtc
cagactacattacccagcatcctcagcaacatgctgtctctacaggaggctgtggaccgt
cactttaaactgcctcatgcctcgagtaaaccagggaagacgtcgtacagtttgggcgac
tcgacgtataaaactttgcgctttgctctgagagcaactctgaaaaccgccatctacaga
atcaccaccaccttcaaagagcacttacagtctgtcagtattccagcagagcagcagaag
agacttcagcagttcctggagtataaggagtag

DBGET integrated database retrieval system