Tachysurus fulvidraco (yellow catfish): 113649080
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Entry
113649080 CDS
T08119
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113649080 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113649080 (ndc1)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113649080 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
113649080
NCBI-ProteinID:
XP_027012489
LinkDB
All DBs
Position
11:23978890..23990683
Genome browser
AA seq
670 aa
AA seq
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MFSFSQSCWFIRKVVRWRAVASIGWSVLLLPPITCVLIMFIRLNVFHPTNWLSGCLGLLT
EASTLFSMFLLCAAVILIAFFNLQYYTVIPSIPCSRVALLAEVLHPRQCVHSLVHCAVGM
LVMWCVCVMAGGRYHTLHIYRTHSESGGVVVCLNEYHVFMLLAGAFMGYSHSLLGVVQNI
HYVSFHIIQQYKYMRFKSSVWWLVKCSAVQSLYSVRNYIILYFLFGRIPRTWIANTLNVH
VDSSVRSLDSFAGLCDVSLFYQLWISGTFLLLTWYLSVLLFRIYITEPYSFLVQSSFSED
TEECLPKVLTEQNVLVMKFLALQDLALLSQHSPSRRQEVFSLSQPGGHPHNWNAISKECV
SLLSELTQRLIAHHDAVASNGRAKPSSERNDTRSSSSSCSVTSGTEDLSDSPRRSALIRT
PGSVFGSAVKGVASPLTAPFTPDLTAPFSSPALRPLLSPQVVHRPWLGSVQSPHVTRRNP
KLWSTSTESQTNGNQPPSPDPSPKPAGEHKPSFLSQWLQNRKEQVKGFLAKRVLVVYLFN
KLPEASSRALFADSQAHIWALEGLSHLVAASYSEDKYGVVQTTLPSILSNMLSLQEAVDR
HFKLPHASSKPGKTSYSLGDSTYKTLRFALRATLKTAIYRITTTFKEHLQSVSIPAEQQK
RLQQFLEYKE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttcagtcagagctgctggtttatacggaaggtggtgagatggagagctgta
gccagtataggctggtcagtgctgcttctgcctcccatcacctgtgtgctcatcatgttc
atcagactcaatgtgtttcaccccacaaactggctttcaggatgtttgggtttgctgaca
gaggccagtacactgttctccatgttcctgctctgtgcagccgttattctcatcgccttc
tttaacctgcagtattacacggtcattccctccatcccttgttcccgtgtggctctgctg
gctgaagtgcttcaccctcgtcagtgtgttcactcactagtgcactgcgcagtcgggatg
ctggtgatgtggtgtgtgtgtgtcatggctggaggacgctatcacacactccacatttat
cgcactcacagtgagagtggcggtgttgtcgtttgcctgaacgagtatcacgtgttcatg
ctgctggccggagcgttcatgggatactctcacagtttactgggcgtcgtccaaaacatc
cactacgtctcctttcacattatccagcaatataagtacatgcgctttaaaagctctgtc
tggtggctggtgaagtgcagcgctgttcagtctttatattcagttaggaattacatcatt
ctctacttcctgtttggacgcatcccgaggacgtggatcgccaacacactgaatgttcat
gtggacagctctgtgcgctctctggactcgtttgcaggactgtgtgacgtgtcgttgttc
tatcagctgtggatcagtggaacgttcctgctgctcacctggtacctgagcgtgctgctc
ttcaggatctacatcactgagccgtacagttttctggtgcagtcgtcgttctctgaggac
acagaagaatgtctccctaaagtcctgactgaacagaatgtcttggtcatgaagtttctg
gcgttgcaggatttggcgttgctttcccagcattccccttcacgcagacaggaagtcttc
agcctcagtcagccaggtggtcatcctcacaattggaacgctatcagtaaggagtgtgtc
tcgttgctgagtgaattaacacagcgtctcatcgcgcatcacgatgccgtggcgtctaac
ggcagagcgaaaccttcatctgagagaaatgacaccagatcgagctcctcatcctgctcg
gtgacgtcagggaccgaggatctttccgactctcctcgccgcagcgctctgattcggact
cctggctctgtgtttggttctgcagtgaagggtgtggcctcgcccctgaccgcaccgttc
acacctgacctgacagcaccgttctccagccccgccctcagacccctgctcagcccacag
gtggtccacagaccctggttgggctcggtccagagtcctcacgtcacccggaggaacccc
aaactgtggagcacgtccaccgaatcgcagaccaatgggaaccaaccgccgtctcctgat
ccctcccccaaaccagcaggcgaacacaaacccagctttctgtctcagtggctacagaac
aggaaggaacaggtgaaaggtttcttggcaaagcgagtgctggttgtgtatttatttaat
aagctgcccgaggcgtcgagtcgagccctgttcgctgatagccaggcgcacatctgggct
ctggaaggattgtctcatctggtagctgcttcatattctgaggataaatacggagtggtc
cagactacattacccagcatcctcagcaacatgctgtctctacaggaggctgtggaccgt
cactttaaactgcctcatgcctcgagtaaaccagggaagacgtcgtacagtttgggcgac
tcgacgtataaaactttgcgctttgctctgagagcaactctgaaaaccgccatctacaga
atcaccaccaccttcaaagagcacttacagtctgtcagtattccagcagagcagcagaag
agacttcagcagttcctggagtataaggagtag
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