Tachysurus fulvidraco (yellow catfish): 113649169
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Entry
113649169 CDS
T08119
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113649169 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfd01002
]
113649169 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tfd00536
]
113649169 (shha)
Peptidases and inhibitors [BR:
tfd01002
]
Cysteine peptidases
Family C46: hedgehog family
113649169 (shha)
Glycosaminoglycan binding proteins [BR:
tfd00536
]
Heparan sulfate / Heparin
Morphogens
113649169 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Intein_splicing
Peptidase_M15_3
DUF7764
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
113649169
NCBI-ProteinID:
XP_027012621
LinkDB
All DBs
Position
1:complement(19047234..19059859)
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AA seq
402 aa
AA seq
DB search
MRALSVSLCLALLVLLPVRACGPGRGYGRRKHPKKLTPLAYKQFIPNVAEKTLGASGRYE
GKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGVKLR
VTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYESKAHIHC
SVKAENSVAAKSGGCFPGSARVRLKDGVLKEVKDLKEGDEVLAADETGNLVYSEVIMFVD
HDRTKRRAFYVIETRNPLMRVVLTAAHLLFVVQNSTLTEIFASDVTPGQEVMILDKGGQR
LRAVTVDRVYQEEHKGSFAPLTGHGTIVVDDILASCYAAVKDQKLAHIAFAPVRFVHKVA
PFLFTGPAQDGGVHWYSDFLYQIGTRILGEAAFHPLSMEDKS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgctgtcggtgagtctgtgcctcgcgctgctggtgctgctgccggtgcgcgcg
tgcggtcctggccgcggttacggccggcggaagcacccgaagaagctgacgccgctcgcg
tacaagcagttcatccccaatgtggcggagaaaacgctgggcgcgagcgggcgctacgag
ggcaaaatcacgcgcaactcggagcgcttcaaggagctcacgcctaactacaacccggac
atcatcttcaaggacgaggagaacacgggggccgaccggctcatgacccagagatgcaaa
gacaagctgaactcgttggccatctctgtgatgaaccagtggccgggggtgaagctgcgc
gtgactgaaggatgggacgaagacggacaccattttgaggagtcgcttcactacgagggc
cgagccgtggacatcaccacgtccgaccgagacaagagcaaatacggtatgctgtcgcgg
ctagctgtggaggccggtttcgactgggtctactacgagtccaaagctcacatccactgc
tccgttaaagcagagaattcagtggccgcgaagtcaggtggttgttttcccggttcggct
cgggtgcgcctgaaggatggagtgctgaaggaggtgaaggacctgaaagagggagacgag
gtcctggcagcggacgagacggggaaccttgtctacagcgaggtcatcatgtttgtggac
cacgaccgcaccaagagacgagctttctatgtcattgagaccaggaatccactgatgcgg
gtcgtcctcaccgccgcgcatctcctctttgttgtacagaactccacgctgaccgagata
tttgccagcgatgtcacaccggggcaggaagtcatgatactggacaagggagggcagcgt
cttcgtgcggtcacggtggatcgtgtttaccaagaagaacataaggggtcctttgcgccg
ctcacgggtcatggcaccattgtagtggacgacatccttgcttcctgttacgccgcagta
aaggaccaaaagctggcgcacatagcgtttgcccccgtccgctttgtccacaaggtggcg
ccgtttttgttcaccggaccggcccaggacggtggcgtgcactggtactctgactttttg
tatcaaattgggacaaggattttaggtgaagctgcttttcatccactcagcatggaggac
aagagctga
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